RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 DEPDC5O75140 1603 aa19.79■□□□□ 0.76
DDX11-227ENST00000544652 DHX29Q7Z478 1369 aaKnown RBP19.79■□□□□ 0.76
DDX11-227ENST00000544652 RNF17Q9BXT8 1623 aaKnown RBP19.78■□□□□ 0.76
DDX11-227ENST00000544652 NAIPQ13075 1403 aa19.77■□□□□ 0.76
DDX11-227ENST00000544652 ERBINQ96RT1 1412 aa19.77■□□□□ 0.76
DDX11-227ENST00000544652 RRP7BPQ9NSQ0 103 aa19.76■□□□□ 0.75
DDX11-227ENST00000544652 UNC13BO14795 1591 aa19.74■□□□□ 0.75
DDX11-227ENST00000544652 ANKRD50Q9ULJ7 1429 aa19.73■□□□□ 0.75
DDX11-227ENST00000544652 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
DDX11-227ENST00000544652 PRDM15P57071 1507 aaPredicted RBP19.69■□□□□ 0.74
DDX11-227ENST00000544652 ADAMTSL3P82987 1691 aa19.68■□□□□ 0.74
DDX11-227ENST00000544652 ZC3H13Q5T200 1668 aaKnown RBP19.68■□□□□ 0.74
DDX11-227ENST00000544652 FER1L4A9Z1Z3 1794 aa19.68■□□□□ 0.74
DDX11-227ENST00000544652 CEP152O94986 1710 aa19.68■□□□□ 0.74
DDX11-227ENST00000544652 SETD5Q9C0A6 1442 aa19.68■□□□□ 0.74
DDX11-227ENST00000544652 FAM135AQ9P2D6 1515 aa19.66■□□□□ 0.74
DDX11-227ENST00000544652 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
DDX11-227ENST00000544652 IQGAP3Q86VI3 1631 aa19.65■□□□□ 0.74
DDX11-227ENST00000544652 MROH2AA6NES4 1674 aa19.64■□□□□ 0.73
DDX11-227ENST00000544652 CLTCQ00610 1675 aaKnown RBP19.63■□□□□ 0.73
DDX11-227ENST00000544652 KDM5DQ9BY66 1539 aa19.63■□□□□ 0.73
DDX11-227ENST00000544652 KIF3BO15066 747 aa19.63■□□□□ 0.73
DDX11-227ENST00000544652 RAB3GAP2Q9H2M9 1393 aa19.61■□□□□ 0.73
DDX11-227ENST00000544652 MADDQ8WXG6 1647 aa19.6■□□□□ 0.73
DDX11-227ENST00000544652 TET3O43151 1660 aa19.59■□□□□ 0.73
DDX11-227ENST00000544652 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
DDX11-227ENST00000544652 HRCP23327 699 aa19.59■□□□□ 0.73
DDX11-227ENST00000544652 ARID4BQ4LE39 1312 aaPredicted RBP19.58■□□□□ 0.73
DDX11-227ENST00000544652 ACIN1Q9UKV3 1341 aaKnown RBP19.58■□□□□ 0.73
DDX11-227ENST00000544652 PCGF6Q9BYE7 350 aa19.58■□□□□ 0.72
DDX11-227ENST00000544652 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.72
DDX11-227ENST00000544652 LMTK2Q8IWU2 1503 aa19.57■□□□□ 0.72
DDX11-227ENST00000544652 ABCC3O15438 1527 aa19.56■□□□□ 0.72
DDX11-227ENST00000544652 C3P01024 1663 aa19.56■□□□□ 0.72
DDX11-227ENST00000544652 GGT6Q6P531 493 aa19.55■□□□□ 0.72
DDX11-227ENST00000544652 E9PCH4 1651 aa19.55■□□□□ 0.72
DDX11-227ENST00000544652 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
DDX11-227ENST00000544652 KANK1Q14678 1352 aa19.52■□□□□ 0.72
DDX11-227ENST00000544652 PZPP20742 1482 aa19.52■□□□□ 0.72
DDX11-227ENST00000544652 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
DDX11-227ENST00000544652 EFCAB6Q5THR3 1501 aa19.51■□□□□ 0.71
DDX11-227ENST00000544652 MLECQ14165 292 aa19.51■□□□□ 0.71
DDX11-227ENST00000544652 NUP155O75694 1391 aa19.5■□□□□ 0.71
DDX11-227ENST00000544652 PREX1Q8TCU6 1659 aa19.49■□□□□ 0.71
DDX11-227ENST00000544652 NPM3O75607 178 aaKnown RBP19.48■□□□□ 0.71
DDX11-227ENST00000544652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.71
DDX11-227ENST00000544652 ARHGAP31Q2M1Z3 1444 aa19.47■□□□□ 0.71
DDX11-227ENST00000544652 SPHKAPQ2M3C7 1700 aa19.47■□□□□ 0.71
DDX11-227ENST00000544652 WASHC2CQ9Y4E1 1318 aa19.47■□□□□ 0.71
DDX11-227ENST00000544652 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
DDX11-227ENST00000544652 TRIM52Q96A61 297 aa19.44■□□□□ 0.7
DDX11-227ENST00000544652 KDM4FA0A1W2PPD8 638 aa19.42■□□□□ 0.7
DDX11-227ENST00000544652 SETD1BQ9UPS6 1966 aaKnown RBP19.42■□□□□ 0.7
DDX11-227ENST00000544652 ZMYM3Q14202 1370 aa19.42■□□□□ 0.7
DDX11-227ENST00000544652 NPATQ14207 1427 aa19.42■□□□□ 0.7
DDX11-227ENST00000544652 PTPRMP28827 1452 aa19.41■□□□□ 0.7
DDX11-227ENST00000544652 SPATA31D1Q6ZQQ2 1576 aa19.41■□□□□ 0.7
DDX11-227ENST00000544652 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
DDX11-227ENST00000544652 MPHOSPH9Q99550 1183 aa19.39■□□□□ 0.69
DDX11-227ENST00000544652 PIK3C2BO00750 1634 aa19.37■□□□□ 0.69
DDX11-227ENST00000544652 SYNMO15061 1565 aa19.36■□□□□ 0.69
DDX11-227ENST00000544652 ERVK-7P63135 1459 aa19.36■□□□□ 0.69
DDX11-227ENST00000544652 NOS1P29475 1434 aa19.35■□□□□ 0.69
DDX11-227ENST00000544652 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
DDX11-227ENST00000544652 TRPM2O94759 1503 aa19.34■□□□□ 0.69
DDX11-227ENST00000544652 KIF1BO60333 1816 aa19.34■□□□□ 0.69
DDX11-227ENST00000544652 PTPRTO14522 1441 aa19.34■□□□□ 0.69
DDX11-227ENST00000544652 MYO3AQ8NEV4 1616 aa19.33■□□□□ 0.69
DDX11-227ENST00000544652 PKD2Q13563 968 aa19.33■□□□□ 0.68
DDX11-227ENST00000544652 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
DDX11-227ENST00000544652 MYO5BQ9ULV0 1848 aa19.32■□□□□ 0.68
DDX11-227ENST00000544652 ZNF142P52746 1687 aaPredicted RBP19.32■□□□□ 0.68
DDX11-227ENST00000544652 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
DDX11-227ENST00000544652 PLA2R1Q13018 1463 aa19.3■□□□□ 0.68
DDX11-227ENST00000544652 CLTCL1P53675 1640 aa19.3■□□□□ 0.68
DDX11-227ENST00000544652 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
DDX11-227ENST00000544652 FBXO31Q5XUX0 539 aaPredicted RBP19.28■□□□□ 0.68
DDX11-227ENST00000544652 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
DDX11-227ENST00000544652 UBR1Q8IWV7 1749 aa19.28■□□□□ 0.68
DDX11-227ENST00000544652 ANKRD30BQ9BXX2 1392 aa19.26■□□□□ 0.67
DDX11-227ENST00000544652 UGGT1Q9NYU2 1555 aa19.26■□□□□ 0.67
DDX11-227ENST00000544652 TNRQ92752 1358 aa19.25■□□□□ 0.67
DDX11-227ENST00000544652 NLRP1Q9C000 1473 aa19.24■□□□□ 0.67
DDX11-227ENST00000544652 TMEM131LA2VDJ0 1609 aa19.24■□□□□ 0.67
DDX11-227ENST00000544652 NEURL4Q96JN8 1562 aa19.23■□□□□ 0.67
DDX11-227ENST00000544652 CEP170BQ9Y4F5 1589 aaPredicted RBP19.23■□□□□ 0.67
DDX11-227ENST00000544652 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
DDX11-227ENST00000544652 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
DDX11-227ENST00000544652 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
DDX11-227ENST00000544652 A2ML1A8K2U0 1454 aa19.19■□□□□ 0.66
DDX11-227ENST00000544652 CCDC144AA2RUR9 1427 aa19.18■□□□□ 0.66
DDX11-227ENST00000544652 PPLO60437 1756 aa19.17■□□□□ 0.66
DDX11-227ENST00000544652 IDI1Q13907 227 aa19.17■□□□□ 0.66
DDX11-227ENST00000544652 CLSPNQ9HAW4 1339 aa19.17■□□□□ 0.66
DDX11-227ENST00000544652 UHRF1BP1Q6BDS2 1440 aa19.16■□□□□ 0.66
DDX11-227ENST00000544652 POLR1AO95602 1720 aaPredicted RBP19.14■□□□□ 0.65
DDX11-227ENST00000544652 SPATA31E1Q6ZUB1 1445 aa19.13■□□□□ 0.65
DDX11-227ENST00000544652 LMTK3Q96Q04 1460 aa19.13■□□□□ 0.65
DDX11-227ENST00000544652 MSH5O43196 834 aa19.1■□□□□ 0.65
DDX11-227ENST00000544652 SLIT1O75093 1534 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms