RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 IQSEC2Q5JU85 1478 aa10.42□□□□□ -0.74
CDCA3-209ENST00000544610 SUPT6HQ7KZ85 1726 aaKnown RBP10.41□□□□□ -0.74
CDCA3-209ENST00000544610 ZMYM3Q14202 1370 aa10.41□□□□□ -0.74
CDCA3-209ENST00000544610 CCNB3Q8WWL7 1395 aa10.41□□□□□ -0.74
CDCA3-209ENST00000544610 CAMSAP1Q5T5Y3 1602 aa10.41□□□□□ -0.74
CDCA3-209ENST00000544610 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
CDCA3-209ENST00000544610 ZNF142P52746 1687 aaPredicted RBP10.41□□□□□ -0.74
CDCA3-209ENST00000544610 CLTCQ00610 1675 aaKnown RBP10.41□□□□□ -0.74
CDCA3-209ENST00000544610 MYO3AQ8NEV4 1616 aa10.4□□□□□ -0.74
CDCA3-209ENST00000544610 TIAM1Q13009 1591 aa10.4□□□□□ -0.74
CDCA3-209ENST00000544610 MTUS2Q5JR59 1369 aa10.39□□□□□ -0.75
CDCA3-209ENST00000544610 EHBP1L1Q8N3D4 1523 aa10.39□□□□□ -0.75
CDCA3-209ENST00000544610 ADGBQ8N7X0 1667 aa10.39□□□□□ -0.75
CDCA3-209ENST00000544610 PLA2R1Q13018 1463 aa10.39□□□□□ -0.75
CDCA3-209ENST00000544610 ABCB7O75027 752 aa10.39□□□□□ -0.75
CDCA3-209ENST00000544610 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
CDCA3-209ENST00000544610 PTPRKQ15262 1439 aa10.39□□□□□ -0.75
CDCA3-209ENST00000544610 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
CDCA3-209ENST00000544610 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
CDCA3-209ENST00000544610 CEP170BQ9Y4F5 1589 aaPredicted RBP10.38□□□□□ -0.75
CDCA3-209ENST00000544610 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
CDCA3-209ENST00000544610 TCOF1Q13428 1488 aaKnown RBP10.36□□□□□ -0.75
CDCA3-209ENST00000544610 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
CDCA3-209ENST00000544610 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
CDCA3-209ENST00000544610 DISP3Q9P2K9 1392 aa10.35□□□□□ -0.75
CDCA3-209ENST00000544610 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
CDCA3-209ENST00000544610 NCKAP5LQ9HCH0 1330 aa10.34□□□□□ -0.75
CDCA3-209ENST00000544610 PKD2Q13563 968 aa10.34□□□□□ -0.75
CDCA3-209ENST00000544610 GGT6Q6P531 493 aa10.34□□□□□ -0.75
CDCA3-209ENST00000544610 PLSCR2Q9NRY7 297 aa10.34□□□□□ -0.75
CDCA3-209ENST00000544610 SPATA31D1Q6ZQQ2 1576 aa10.34□□□□□ -0.75
CDCA3-209ENST00000544610 FAM135AQ9P2D6 1515 aa10.33□□□□□ -0.76
CDCA3-209ENST00000544610 DHX29Q7Z478 1369 aaKnown RBP10.33□□□□□ -0.76
CDCA3-209ENST00000544610 A2ML1A8K2U0 1454 aa10.33□□□□□ -0.76
CDCA3-209ENST00000544610 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
CDCA3-209ENST00000544610 CCDC141Q6ZP82 1450 aa10.32□□□□□ -0.76
CDCA3-209ENST00000544610 ILDR2Q71H61 639 aa10.32□□□□□ -0.76
CDCA3-209ENST00000544610 DNMT1P26358 1616 aaKnown RBP10.32□□□□□ -0.76
CDCA3-209ENST00000544610 KDM5DQ9BY66 1539 aa10.32□□□□□ -0.76
CDCA3-209ENST00000544610 CAMSAP2Q08AD1 1489 aa10.31□□□□□ -0.76
CDCA3-209ENST00000544610 NCOA2Q15596 1464 aa10.31□□□□□ -0.76
CDCA3-209ENST00000544610 PZPP20742 1482 aa10.3□□□□□ -0.76
CDCA3-209ENST00000544610 APLP2Q06481 763 aa10.3□□□□□ -0.76
CDCA3-209ENST00000544610 HAX1O00165 279 aa10.29□□□□□ -0.76
CDCA3-209ENST00000544610 ARHGEF5Q12774 1597 aa10.29□□□□□ -0.76
CDCA3-209ENST00000544610 NEURL4Q96JN8 1562 aa10.29□□□□□ -0.76
CDCA3-209ENST00000544610 TNRQ92752 1358 aa10.28□□□□□ -0.76
CDCA3-209ENST00000544610 POLR1AO95602 1720 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-209ENST00000544610 VPS8Q8N3P4 1428 aa10.28□□□□□ -0.76
CDCA3-209ENST00000544610 SOCS7O14512 581 aa10.28□□□□□ -0.76
CDCA3-209ENST00000544610 RSPH4AQ5TD94 716 aa10.28□□□□□ -0.76
CDCA3-209ENST00000544610 UBAP1LF5GYI3 381 aa10.27□□□□□ -0.77
CDCA3-209ENST00000544610 KIF3BO15066 747 aa10.27□□□□□ -0.77
CDCA3-209ENST00000544610 NLRP1Q9C000 1473 aa10.26□□□□□ -0.77
CDCA3-209ENST00000544610 CPS1P31327 1500 aa10.26□□□□□ -0.77
CDCA3-209ENST00000544610 RNF17Q9BXT8 1623 aaKnown RBP10.25□□□□□ -0.77
CDCA3-209ENST00000544610 FBXO31Q5XUX0 539 aaPredicted RBP10.25□□□□□ -0.77
CDCA3-209ENST00000544610 MAST1Q9Y2H9 1570 aa10.25□□□□□ -0.77
CDCA3-209ENST00000544610 WASHC2CQ9Y4E1 1318 aa10.25□□□□□ -0.77
CDCA3-209ENST00000544610 MIA2Q96PC5 1412 aa10.24□□□□□ -0.77
CDCA3-209ENST00000544610 LRRC9Q6ZRR7 1453 aa10.24□□□□□ -0.77
CDCA3-209ENST00000544610 MAP3K1Q13233 1512 aa10.24□□□□□ -0.77
CDCA3-209ENST00000544610 ZC3H13Q5T200 1668 aaKnown RBP10.24□□□□□ -0.77
CDCA3-209ENST00000544610 MED14O60244 1454 aa10.23□□□□□ -0.77
CDCA3-209ENST00000544610 SHANK2Q9UPX8 1470 aa10.23□□□□□ -0.77
CDCA3-209ENST00000544610 VWDEQ8N2E2 1590 aa10.23□□□□□ -0.77
CDCA3-209ENST00000544610 UGGT1Q9NYU2 1555 aa10.23□□□□□ -0.77
CDCA3-209ENST00000544610 DEPDC5O75140 1603 aa10.23□□□□□ -0.77
CDCA3-209ENST00000544610 EIF2AK4Q9P2K8 1649 aaKnown RBP10.23□□□□□ -0.77
CDCA3-209ENST00000544610 ABCC3O15438 1527 aa10.23□□□□□ -0.77
CDCA3-209ENST00000544610 TSPY4P0CV99 314 aa10.22□□□□□ -0.77
CDCA3-209ENST00000544610 TSPY10P0CW01 314 aa10.22□□□□□ -0.77
CDCA3-209ENST00000544610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDCA3-209ENST00000544610 MROH1Q8NDA8 1641 aa10.22□□□□□ -0.77
CDCA3-209ENST00000544610 ANKLE2Q86XL3 938 aa10.21□□□□□ -0.77
CDCA3-209ENST00000544610 THEMISQ8N1K5 641 aaPredicted RBP10.21□□□□□ -0.77
CDCA3-209ENST00000544610 NPHP4O75161 1426 aaPredicted RBP10.21□□□□□ -0.78
CDCA3-209ENST00000544610 ERVK-7P63135 1459 aa10.2□□□□□ -0.78
CDCA3-209ENST00000544610 IQGAP1P46940 1657 aa10.19□□□□□ -0.78
CDCA3-209ENST00000544610 MYOM3Q5VTT5 1437 aa10.19□□□□□ -0.78
CDCA3-209ENST00000544610 ALKQ9UM73 1620 aa10.18□□□□□ -0.78
CDCA3-209ENST00000544610 TOM1O60784 492 aa10.18□□□□□ -0.78
CDCA3-209ENST00000544610 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
CDCA3-209ENST00000544610 PRDM15P57071 1507 aaPredicted RBP10.17□□□□□ -0.78
CDCA3-209ENST00000544610 DUOX2Q9NRD8 1548 aa10.17□□□□□ -0.78
CDCA3-209ENST00000544610 HSPA1LP34931 641 aa10.17□□□□□ -0.78
CDCA3-209ENST00000544610 SYNMO15061 1565 aa10.17□□□□□ -0.78
CDCA3-209ENST00000544610 PIP4K2BP78356 416 aa10.16□□□□□ -0.78
CDCA3-209ENST00000544610 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-209ENST00000544610 PIP4P2Q8N4L2 257 aa10.16□□□□□ -0.78
CDCA3-209ENST00000544610 CEP152O94986 1710 aa10.16□□□□□ -0.78
CDCA3-209ENST00000544610 UBR1Q8IWV7 1749 aa10.16□□□□□ -0.78
CDCA3-209ENST00000544610 LRRC7Q96NW7 1537 aa10.15□□□□□ -0.78
CDCA3-209ENST00000544610 STRCP1A6NGW2 1772 aa10.15□□□□□ -0.78
CDCA3-209ENST00000544610 CROCC2H7BZ55 1655 aa10.15□□□□□ -0.79
CDCA3-209ENST00000544610 ARHGAP31Q2M1Z3 1444 aa10.15□□□□□ -0.79
CDCA3-209ENST00000544610 ERBINQ96RT1 1412 aa10.15□□□□□ -0.79
CDCA3-209ENST00000544610 SLIT1O75093 1534 aa10.14□□□□□ -0.79
CDCA3-209ENST00000544610 SCAF11Q99590 1463 aaKnown RBP10.14□□□□□ -0.79
CDCA3-209ENST00000544610 ARHGAP23Q9P227 1491 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms