RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 POLR1AO95602 1720 aaPredicted RBP25.09■■□□□ 1.61
CD4-212ENST00000544344 FBXO31Q5XUX0 539 aaPredicted RBP25.09■■□□□ 1.61
CD4-212ENST00000544344 PZPP20742 1482 aa25.07■■□□□ 1.6
CD4-212ENST00000544344 TNRQ92752 1358 aa25.06■■□□□ 1.6
CD4-212ENST00000544344 KDM5DQ9BY66 1539 aa25.05■■□□□ 1.6
CD4-212ENST00000544344 FAM135AQ9P2D6 1515 aa25.04■■□□□ 1.6
CD4-212ENST00000544344 KIF3BO15066 747 aa25.04■■□□□ 1.6
CD4-212ENST00000544344 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
CD4-212ENST00000544344 CPS1P31327 1500 aa25.03■■□□□ 1.6
CD4-212ENST00000544344 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
CD4-212ENST00000544344 CAMSAP2Q08AD1 1489 aa25.01■■□□□ 1.59
CD4-212ENST00000544344 HSPA1LP34931 641 aa25■■□□□ 1.59
CD4-212ENST00000544344 VWDEQ8N2E2 1590 aa25■■□□□ 1.59
CD4-212ENST00000544344 NCOA2Q15596 1464 aa24.99■■□□□ 1.59
CD4-212ENST00000544344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.98■■□□□ 1.59
CD4-212ENST00000544344 MIA2Q96PC5 1412 aa24.97■■□□□ 1.59
CD4-212ENST00000544344 MED1Q15648 1581 aaPredicted RBP24.97■■□□□ 1.59
CD4-212ENST00000544344 WASHC2CQ9Y4E1 1318 aa24.96■■□□□ 1.59
CD4-212ENST00000544344 ALKQ9UM73 1620 aa24.96■■□□□ 1.59
CD4-212ENST00000544344 NLRP1Q9C000 1473 aa24.96■■□□□ 1.59
CD4-212ENST00000544344 PIP4K2BP78356 416 aa24.95■■□□□ 1.58
CD4-212ENST00000544344 MED14O60244 1454 aa24.95■■□□□ 1.58
CD4-212ENST00000544344 DEPDC5O75140 1603 aa24.94■■□□□ 1.58
CD4-212ENST00000544344 ARHGEF5Q12774 1597 aa24.94■■□□□ 1.58
CD4-212ENST00000544344 TOM1O60784 492 aa24.94■■□□□ 1.58
CD4-212ENST00000544344 RSPH4AQ5TD94 716 aa24.94■■□□□ 1.58
CD4-212ENST00000544344 ANKLE2Q86XL3 938 aa24.94■■□□□ 1.58
CD4-212ENST00000544344 UGGT1Q9NYU2 1555 aa24.93■■□□□ 1.58
CD4-212ENST00000544344 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
CD4-212ENST00000544344 THEMISQ8N1K5 641 aaPredicted RBP24.92■■□□□ 1.58
CD4-212ENST00000544344 NPHP4O75161 1426 aaPredicted RBP24.91■■□□□ 1.58
CD4-212ENST00000544344 RNF17Q9BXT8 1623 aaKnown RBP24.89■■□□□ 1.57
CD4-212ENST00000544344 IQGAP1P46940 1657 aa24.88■■□□□ 1.57
CD4-212ENST00000544344 STRCP1A6NGW2 1772 aa24.88■■□□□ 1.57
CD4-212ENST00000544344 ABCC3O15438 1527 aa24.86■■□□□ 1.57
CD4-212ENST00000544344 MAST1Q9Y2H9 1570 aa24.84■■□□□ 1.57
CD4-212ENST00000544344 ZC3H13Q5T200 1668 aaKnown RBP24.83■■□□□ 1.57
CD4-212ENST00000544344 TSPY4P0CV99 314 aa24.83■■□□□ 1.57
CD4-212ENST00000544344 TSPY10P0CW01 314 aa24.83■■□□□ 1.57
CD4-212ENST00000544344 MROH1Q8NDA8 1641 aa24.83■■□□□ 1.56
CD4-212ENST00000544344 LRRC7Q96NW7 1537 aa24.81■■□□□ 1.56
CD4-212ENST00000544344 ERVK-7P63135 1459 aa24.81■■□□□ 1.56
CD4-212ENST00000544344 EIF2AK4Q9P2K8 1649 aaKnown RBP24.79■■□□□ 1.56
CD4-212ENST00000544344 LRRC9Q6ZRR7 1453 aa24.77■■□□□ 1.56
CD4-212ENST00000544344 UBR1Q8IWV7 1749 aa24.77■■□□□ 1.56
CD4-212ENST00000544344 SYNMO15061 1565 aa24.76■■□□□ 1.55
CD4-212ENST00000544344 CEP152O94986 1710 aa24.75■■□□□ 1.55
CD4-212ENST00000544344 CFAP65Q6ZU64 1925 aaKnown RBP24.73■■□□□ 1.55
CD4-212ENST00000544344 SCAF11Q99590 1463 aaKnown RBP24.7■■□□□ 1.54
CD4-212ENST00000544344 ARHGAP23Q9P227 1491 aa24.7■■□□□ 1.54
CD4-212ENST00000544344 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
CD4-212ENST00000544344 SLIT1O75093 1534 aa24.68■■□□□ 1.54
CD4-212ENST00000544344 LTKP29376 864 aa24.68■■□□□ 1.54
CD4-212ENST00000544344 KANK4Q5T7N3 995 aaPredicted RBP24.68■■□□□ 1.54
CD4-212ENST00000544344 XIRP1Q702N8 1843 aaKnown RBP24.68■■□□□ 1.54
CD4-212ENST00000544344 DUOX2Q9NRD8 1548 aa24.67■■□□□ 1.54
CD4-212ENST00000544344 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
CD4-212ENST00000544344 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
CD4-212ENST00000544344 MYOM3Q5VTT5 1437 aa24.66■■□□□ 1.54
CD4-212ENST00000544344 PRDM15P57071 1507 aaPredicted RBP24.65■■□□□ 1.54
CD4-212ENST00000544344 ARHGAP31Q2M1Z3 1444 aa24.64■■□□□ 1.54
CD4-212ENST00000544344 MAP3K1Q13233 1512 aa24.64■■□□□ 1.53
CD4-212ENST00000544344 TXNDC2Q86VQ3 553 aa24.61■■□□□ 1.53
CD4-212ENST00000544344 RGS17Q9UGC6 210 aaPredicted RBP24.59■■□□□ 1.53
CD4-212ENST00000544344 PIK3C2BO00750 1634 aa24.59■■□□□ 1.53
CD4-212ENST00000544344 KIF15Q9NS87 1388 aa24.58■■□□□ 1.53
CD4-212ENST00000544344 CROCC2H7BZ55 1655 aa24.58■■□□□ 1.53
CD4-212ENST00000544344 ABCC5O15440 1437 aa24.57■■□□□ 1.52
CD4-212ENST00000544344 ERBINQ96RT1 1412 aa24.57■■□□□ 1.52
CD4-212ENST00000544344 TMEM2Q9UHN6 1383 aa24.54■■□□□ 1.52
CD4-212ENST00000544344 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
CD4-212ENST00000544344 RRP7BPQ9NSQ0 103 aa24.52■■□□□ 1.52
CD4-212ENST00000544344 EID1Q9Y6B2 187 aa24.52■■□□□ 1.52
CD4-212ENST00000544344 KDM5AP29375 1690 aaKnown RBP24.52■■□□□ 1.52
CD4-212ENST00000544344 FAM135BQ49AJ0 1406 aa24.52■■□□□ 1.52
CD4-212ENST00000544344 PTPN23Q9H3S7 1636 aa24.5■■□□□ 1.51
CD4-212ENST00000544344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.49■■□□□ 1.51
CD4-212ENST00000544344 TET3O43151 1660 aa24.49■■□□□ 1.51
CD4-212ENST00000544344 EFCAB6Q5THR3 1501 aa24.48■■□□□ 1.51
CD4-212ENST00000544344 LMTK2Q8IWU2 1503 aa24.48■■□□□ 1.51
CD4-212ENST00000544344 DAPK1P53355 1430 aa24.47■■□□□ 1.51
CD4-212ENST00000544344 TMEM94Q12767 1356 aa24.47■■□□□ 1.51
CD4-212ENST00000544344 IDI1Q13907 227 aa24.46■■□□□ 1.51
CD4-212ENST00000544344 KCNA6P17658 529 aa24.44■■□□□ 1.5
CD4-212ENST00000544344 KANK1Q14678 1352 aa24.43■■□□□ 1.5
CD4-212ENST00000544344 ROBO1Q9Y6N7 1651 aa24.43■■□□□ 1.5
CD4-212ENST00000544344 NOS1P29475 1434 aa24.43■■□□□ 1.5
CD4-212ENST00000544344 STAG3Q9UJ98 1225 aa24.42■■□□□ 1.5
CD4-212ENST00000544344 SLC26A8Q96RN1 970 aa24.41■■□□□ 1.5
CD4-212ENST00000544344 RBM33Q96EV2 1170 aaKnown RBP24.4■■□□□ 1.5
CD4-212ENST00000544344 FGD6Q6ZV73 1430 aa24.4■■□□□ 1.5
CD4-212ENST00000544344 NWD1Q149M9 1564 aa24.4■■□□□ 1.5
CD4-212ENST00000544344 POTEAQ6S8J7 498 aa24.39■■□□□ 1.49
CD4-212ENST00000544344 ADGRB3O60242 1522 aa24.39■■□□□ 1.49
CD4-212ENST00000544344 PROSER2Q86WR7 435 aaPredicted RBP24.37■■□□□ 1.49
CD4-212ENST00000544344 NKTRP30414 1462 aaKnown RBP24.37■■□□□ 1.49
CD4-212ENST00000544344 CHIC2Q9UKJ5 165 aa24.36■■□□□ 1.49
CD4-212ENST00000544344 ANKRD30AQ9BXX3 1397 aa24.36■■□□□ 1.49
CD4-212ENST00000544344 SLC52A1Q9NWF4 448 aa24.31■■□□□ 1.48
CD4-212ENST00000544344 ZFYVE9O95405 1425 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms