RNA–Protein interactions for RNA: ENST00000544258.1

C12orf4-207, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 727 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-207ENST00000544258 FOSBP53539 338 aa9.3□□□□□ -0.92
C12orf4-207ENST00000544258 JPH4Q96JJ6 628 aa9.3□□□□□ -0.92
C12orf4-207ENST00000544258 ZDHHC16Q969W1 377 aa9.29□□□□□ -0.92
C12orf4-207ENST00000544258 ZMYND10O75800 440 aa9.27□□□□□ -0.93
C12orf4-207ENST00000544258 PHF14O94880 888 aa9.27□□□□□ -0.93
C12orf4-207ENST00000544258 GRXCR2A6NFK2 248 aa9.26□□□□□ -0.93
C12orf4-207ENST00000544258 POTEEQ6S8J3 1075 aa9.26□□□□□ -0.93
C12orf4-207ENST00000544258 DDX12PQ92771 950 aa9.26□□□□□ -0.93
C12orf4-207ENST00000544258 KCNK17Q96T54 332 aa9.26□□□□□ -0.93
C12orf4-207ENST00000544258 EPAS1Q99814 870 aa9.26□□□□□ -0.93
C12orf4-207ENST00000544258 PTPREP23469 700 aa9.25□□□□□ -0.93
C12orf4-207ENST00000544258 PSEN2P49810 448 aa9.25□□□□□ -0.93
C12orf4-207ENST00000544258 RBM26Q5T8P6 1007 aaKnown RBP9.25□□□□□ -0.93
C12orf4-207ENST00000544258 TYW1BQ6NUM6 668 aa9.25□□□□□ -0.93
C12orf4-207ENST00000544258 FBXW7Q969H0 707 aa9.25□□□□□ -0.93
C12orf4-207ENST00000544258 PCDHGA10Q9Y5H3 936 aa9.25□□□□□ -0.93
C12orf4-207ENST00000544258 BARGINQ6ZT62 677 aa9.24□□□□□ -0.93
C12orf4-207ENST00000544258 BCL2L12Q9HB09 334 aa9.24□□□□□ -0.93
C12orf4-207ENST00000544258 ADAM33Q9BZ11 813 aa9.23□□□□□ -0.93
C12orf4-207ENST00000544258 OSBPP22059 807 aa9.22□□□□□ -0.93
C12orf4-207ENST00000544258 RBM33Q96EV2 1170 aaKnown RBP9.21□□□□□ -0.94
C12orf4-207ENST00000544258 STAC3Q96MF2 364 aa9.21□□□□□ -0.94
C12orf4-207ENST00000544258 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
C12orf4-207ENST00000544258 FCHSD2O94868 740 aa9.2□□□□□ -0.94
C12orf4-207ENST00000544258 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
C12orf4-207ENST00000544258 ADGRD1Q6QNK2 874 aa9.19□□□□□ -0.94
C12orf4-207ENST00000544258 HIC1Q14526 733 aa9.18□□□□□ -0.94
C12orf4-207ENST00000544258 KRI1Q8N9T8 703 aaKnown RBP9.18□□□□□ -0.94
C12orf4-207ENST00000544258 AK7Q96M32 723 aa9.18□□□□□ -0.94
C12orf4-207ENST00000544258 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
C12orf4-207ENST00000544258 TK2O00142 265 aa9.17□□□□□ -0.94
C12orf4-207ENST00000544258 MAP3K7O43318 606 aa9.17□□□□□ -0.94
C12orf4-207ENST00000544258 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
C12orf4-207ENST00000544258 C6orf132Q5T0Z8 1188 aa9.16□□□□□ -0.94
C12orf4-207ENST00000544258 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
C12orf4-207ENST00000544258 MINK1Q8N4C8 1332 aaPredicted RBP9.15□□□□□ -0.94
C12orf4-207ENST00000544258 GNPATO15228 680 aa9.15□□□□□ -0.94
C12orf4-207ENST00000544258 CERKQ8TCT0 537 aa9.15□□□□□ -0.94
C12orf4-207ENST00000544258 PPP1R3GB7ZBB8 358 aa9.14□□□□□ -0.95
C12orf4-207ENST00000544258 GPR37O15354 613 aa9.14□□□□□ -0.95
C12orf4-207ENST00000544258 MAP2K5Q13163 448 aa9.14□□□□□ -0.95
C12orf4-207ENST00000544258 ZBED2Q9BTP6 218 aa9.13□□□□□ -0.95
C12orf4-207ENST00000544258 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
C12orf4-207ENST00000544258 PTGDRQ13258 359 aa9.12□□□□□ -0.95
C12orf4-207ENST00000544258 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
C12orf4-207ENST00000544258 COL9A1P20849 921 aa9.11□□□□□ -0.95
C12orf4-207ENST00000544258 TSR1Q2NL82 804 aaKnown RBP9.11□□□□□ -0.95
C12orf4-207ENST00000544258 HRO43593 1189 aa9.1□□□□□ -0.95
C12orf4-207ENST00000544258 TMEM132AQ24JP5 1023 aa9.09□□□□□ -0.95
C12orf4-207ENST00000544258 GOLGA8CPA6NN73 597 aa9.08□□□□□ -0.96
C12orf4-207ENST00000544258 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
C12orf4-207ENST00000544258 PROX2Q3B8N5 592 aa9.08□□□□□ -0.96
C12orf4-207ENST00000544258 NBPF3Q9H094 633 aa9.08□□□□□ -0.96
C12orf4-207ENST00000544258 RBM27Q9P2N5 1060 aaKnown RBP9.08□□□□□ -0.96
C12orf4-207ENST00000544258 IRF6O14896 467 aa9.07□□□□□ -0.96
C12orf4-207ENST00000544258 BRPF1P55201 1214 aaPredicted RBP9.07□□□□□ -0.96
C12orf4-207ENST00000544258 MRPL50Q8N5N7 158 aaKnown RBP9.07□□□□□ -0.96
C12orf4-207ENST00000544258 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
C12orf4-207ENST00000544258 TRIM66O15016 1216 aa9.05□□□□□ -0.96
C12orf4-207ENST00000544258 PRIM1P49642 420 aaKnown RBP9.05□□□□□ -0.96
C12orf4-207ENST00000544258 KIAA1468Q9P260 1216 aa9.05□□□□□ -0.96
C12orf4-207ENST00000544258 RABGEF1Q9UJ41 708 aa9.05□□□□□ -0.96
C12orf4-207ENST00000544258 PACS2Q86VP3 889 aa9.04□□□□□ -0.96
C12orf4-207ENST00000544258 TRIM6-TRIM34B2RNG4 842 aa9.03□□□□□ -0.96
C12orf4-207ENST00000544258 BHMG1C9JSJ3 638 aaPredicted RBP9.03□□□□□ -0.96
C12orf4-207ENST00000544258 ONECUT3O60422 494 aaPredicted RBP9.03□□□□□ -0.96
C12orf4-207ENST00000544258 CCDC102AQ96A19 550 aa9.03□□□□□ -0.96
C12orf4-207ENST00000544258 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
C12orf4-207ENST00000544258 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
C12orf4-207ENST00000544258 PRSS12P56730 875 aa9.02□□□□□ -0.97
C12orf4-207ENST00000544258 PDE4DQ08499 809 aa9.02□□□□□ -0.97
C12orf4-207ENST00000544258 AMHR2Q16671 573 aa9.02□□□□□ -0.97
C12orf4-207ENST00000544258 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.97
C12orf4-207ENST00000544258 CDHR5Q9HBB8 845 aa9.02□□□□□ -0.97
C12orf4-207ENST00000544258 OATP04181 439 aa9□□□□□ -0.97
C12orf4-207ENST00000544258 WNT2BQ93097 391 aa8.99□□□□□ -0.97
C12orf4-207ENST00000544258 LAPTM4BQ86VI4 370 aa8.98□□□□□ -0.97
C12orf4-207ENST00000544258 SEPT9Q9UHD8 586 aaPredicted RBP8.98□□□□□ -0.97
C12orf4-207ENST00000544258 TSKSQ9UJT2 592 aa8.98□□□□□ -0.97
C12orf4-207ENST00000544258 PLA2G2EQ9NZK7 142 aa8.97□□□□□ -0.97
C12orf4-207ENST00000544258 FECHP22830 423 aa8.96□□□□□ -0.98
C12orf4-207ENST00000544258 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
C12orf4-207ENST00000544258 ANKK1Q8NFD2 765 aa8.96□□□□□ -0.98
C12orf4-207ENST00000544258 KDM4CQ9H3R0 1056 aa8.96□□□□□ -0.98
C12orf4-207ENST00000544258 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
C12orf4-207ENST00000544258 CLCN1P35523 988 aa8.95□□□□□ -0.98
C12orf4-207ENST00000544258 PTPN5P54829 565 aa8.95□□□□□ -0.98
C12orf4-207ENST00000544258 FAM98CQ17RN3 349 aaKnown RBP8.95□□□□□ -0.98
C12orf4-207ENST00000544258 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
C12orf4-207ENST00000544258 PNMA3Q9UL41 463 aa8.95□□□□□ -0.98
C12orf4-207ENST00000544258 TTLL12Q14166 644 aaPredicted RBP8.94□□□□□ -0.98
C12orf4-207ENST00000544258 PADI6Q6TGC4 694 aa8.94□□□□□ -0.98
C12orf4-207ENST00000544258 RBM46Q8TBY0 533 aaKnown RBP8.94□□□□□ -0.98
C12orf4-207ENST00000544258 DDRGK1Q96HY6 314 aa8.94□□□□□ -0.98
C12orf4-207ENST00000544258 ZFRQ96KR1 1074 aaKnown RBP8.94□□□□□ -0.98
C12orf4-207ENST00000544258 SMAPO00193 183 aa8.93□□□□□ -0.98
C12orf4-207ENST00000544258 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
C12orf4-207ENST00000544258 NUDT18Q6ZVK8 323 aa8.93□□□□□ -0.98
C12orf4-207ENST00000544258 TATDN2Q93075 761 aa8.93□□□□□ -0.98
C12orf4-207ENST00000544258 THSD4Q6ZMP0 1018 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms