RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
SSPN-208ENST00000544231 KANK1Q14678 1352 aa21.82■■□□□ 1.08
SSPN-208ENST00000544231 ESF1Q9H501 851 aaKnown RBP21.81■■□□□ 1.08
SSPN-208ENST00000544231 FAM135AQ9P2D6 1515 aa21.8■■□□□ 1.08
SSPN-208ENST00000544231 DEPDC5O75140 1603 aa21.8■■□□□ 1.08
SSPN-208ENST00000544231 PCGF6Q9BYE7 350 aa21.79■■□□□ 1.08
SSPN-208ENST00000544231 PRDM15P57071 1507 aaPredicted RBP21.79■■□□□ 1.08
SSPN-208ENST00000544231 RAB3GAP2Q9H2M9 1393 aa21.78■■□□□ 1.08
SSPN-208ENST00000544231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.78■■□□□ 1.08
SSPN-208ENST00000544231 HRCP23327 699 aa21.77■■□□□ 1.08
SSPN-208ENST00000544231 CNTLNQ9NXG0 1405 aa21.77■■□□□ 1.08
SSPN-208ENST00000544231 UNC13BO14795 1591 aa21.77■■□□□ 1.08
SSPN-208ENST00000544231 WASHC2CQ9Y4E1 1318 aa21.76■■□□□ 1.07
SSPN-208ENST00000544231 MROH1Q8NDA8 1641 aa21.75■■□□□ 1.07
SSPN-208ENST00000544231 KDM5DQ9BY66 1539 aa21.75■■□□□ 1.07
SSPN-208ENST00000544231 NUP155O75694 1391 aa21.74■■□□□ 1.07
SSPN-208ENST00000544231 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
SSPN-208ENST00000544231 ADAMTSL3P82987 1691 aa21.72■■□□□ 1.07
SSPN-208ENST00000544231 ZC3H13Q5T200 1668 aaKnown RBP21.72■■□□□ 1.07
SSPN-208ENST00000544231 FER1L4A9Z1Z3 1794 aa21.71■■□□□ 1.07
SSPN-208ENST00000544231 ABCC3O15438 1527 aa21.7■■□□□ 1.07
SSPN-208ENST00000544231 VWDEQ8N2E2 1590 aa21.7■■□□□ 1.06
SSPN-208ENST00000544231 MADDQ8WXG6 1647 aa21.69■■□□□ 1.06
SSPN-208ENST00000544231 LMTK2Q8IWU2 1503 aa21.69■■□□□ 1.06
SSPN-208ENST00000544231 IQGAP3Q86VI3 1631 aa21.69■■□□□ 1.06
SSPN-208ENST00000544231 CLTCQ00610 1675 aaKnown RBP21.66■■□□□ 1.06
SSPN-208ENST00000544231 MROH2AA6NES4 1674 aa21.66■■□□□ 1.06
SSPN-208ENST00000544231 CEP152O94986 1710 aa21.64■■□□□ 1.06
SSPN-208ENST00000544231 RIMS1Q86UR5 1692 aaKnown RBP21.64■■□□□ 1.05
SSPN-208ENST00000544231 ZMYM3Q14202 1370 aa21.63■■□□□ 1.05
SSPN-208ENST00000544231 KDM4FA0A1W2PPD8 638 aa21.63■■□□□ 1.05
SSPN-208ENST00000544231 SLC4A1APQ9BWU0 796 aaKnown RBP21.63■■□□□ 1.05
SSPN-208ENST00000544231 ARHGAP31Q2M1Z3 1444 aa21.63■■□□□ 1.05
SSPN-208ENST00000544231 TET3O43151 1660 aa21.63■■□□□ 1.05
SSPN-208ENST00000544231 CAMSAP1Q5T5Y3 1602 aa21.62■■□□□ 1.05
SSPN-208ENST00000544231 EFCAB6Q5THR3 1501 aa21.61■■□□□ 1.05
SSPN-208ENST00000544231 PZPP20742 1482 aa21.61■■□□□ 1.05
SSPN-208ENST00000544231 PTPRMP28827 1452 aa21.59■■□□□ 1.05
SSPN-208ENST00000544231 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
SSPN-208ENST00000544231 MPHOSPH9Q99550 1183 aa21.59■■□□□ 1.05
SSPN-208ENST00000544231 NPATQ14207 1427 aa21.56■■□□□ 1.04
SSPN-208ENST00000544231 PKD2Q13563 968 aa21.55■■□□□ 1.04
SSPN-208ENST00000544231 C3P01024 1663 aa21.55■■□□□ 1.04
SSPN-208ENST00000544231 CEBPAP49715 358 aaPredicted RBP21.53■■□□□ 1.04
SSPN-208ENST00000544231 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
SSPN-208ENST00000544231 E9PCH4 1651 aa21.51■■□□□ 1.03
SSPN-208ENST00000544231 ERVK-7P63135 1459 aa21.51■■□□□ 1.03
SSPN-208ENST00000544231 TNRQ92752 1358 aa21.48■■□□□ 1.03
SSPN-208ENST00000544231 SPATA31D1Q6ZQQ2 1576 aa21.48■■□□□ 1.03
SSPN-208ENST00000544231 FBXO31Q5XUX0 539 aaPredicted RBP21.48■■□□□ 1.03
SSPN-208ENST00000544231 NOS1P29475 1434 aa21.47■■□□□ 1.03
SSPN-208ENST00000544231 PREX1Q8TCU6 1659 aa21.47■■□□□ 1.03
SSPN-208ENST00000544231 PTPRTO14522 1441 aa21.46■■□□□ 1.03
SSPN-208ENST00000544231 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.02
SSPN-208ENST00000544231 CFAP65Q6ZU64 1925 aaKnown RBP21.44■■□□□ 1.02
SSPN-208ENST00000544231 SETD1BQ9UPS6 1966 aaKnown RBP21.44■■□□□ 1.02
SSPN-208ENST00000544231 FOXD1Q16676 465 aa21.43■■□□□ 1.02
SSPN-208ENST00000544231 SLC52A1Q9NWF4 448 aa21.43■■□□□ 1.02
SSPN-208ENST00000544231 SPHKAPQ2M3C7 1700 aa21.43■■□□□ 1.02
SSPN-208ENST00000544231 TRPM2O94759 1503 aa21.42■■□□□ 1.02
SSPN-208ENST00000544231 NLRP1Q9C000 1473 aa21.42■■□□□ 1.02
SSPN-208ENST00000544231 SYNMO15061 1565 aa21.4■■□□□ 1.02
SSPN-208ENST00000544231 UHRF1BP1Q6BDS2 1440 aa21.39■■□□□ 1.02
SSPN-208ENST00000544231 CCDC144AA2RUR9 1427 aa21.38■■□□□ 1.01
SSPN-208ENST00000544231 ANKRD30BQ9BXX2 1392 aa21.38■■□□□ 1.01
SSPN-208ENST00000544231 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
SSPN-208ENST00000544231 MYO3AQ8NEV4 1616 aa21.37■■□□□ 1.01
SSPN-208ENST00000544231 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
SSPN-208ENST00000544231 IDI1Q13907 227 aa21.35■■□□□ 1.01
SSPN-208ENST00000544231 A2ML1A8K2U0 1454 aa21.34■■□□□ 1.01
SSPN-208ENST00000544231 PIK3C2BO00750 1634 aa21.34■■□□□ 1.01
SSPN-208ENST00000544231 STAG3Q9UJ98 1225 aa21.34■■□□□ 1.01
SSPN-208ENST00000544231 CEP170BQ9Y4F5 1589 aaPredicted RBP21.32■■□□□ 1
SSPN-208ENST00000544231 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
SSPN-208ENST00000544231 UGGT1Q9NYU2 1555 aa21.31■■□□□ 1
SSPN-208ENST00000544231 CLSPNQ9HAW4 1339 aa21.31■■□□□ 1
SSPN-208ENST00000544231 CLTCL1P53675 1640 aa21.31■■□□□ 1
SSPN-208ENST00000544231 ZNF142P52746 1687 aaPredicted RBP21.31■■□□□ 1
SSPN-208ENST00000544231 ADGRB3O60242 1522 aa21.29■■□□□ 1
SSPN-208ENST00000544231 CHGAP10645 457 aaKnown RBP21.29■■□□□ 1
SSPN-208ENST00000544231 KDM5AP29375 1690 aaKnown RBP21.28■■□□□ 1
SSPN-208ENST00000544231 THEMISQ8N1K5 641 aaPredicted RBP21.28■■□□□ 1
SSPN-208ENST00000544231 KIF1BO60333 1816 aa21.25■□□□□ 0.99
SSPN-208ENST00000544231 LMTK3Q96Q04 1460 aa21.25■□□□□ 0.99
SSPN-208ENST00000544231 UBR1Q8IWV7 1749 aa21.24■□□□□ 0.99
SSPN-208ENST00000544231 NEURL4Q96JN8 1562 aa21.23■□□□□ 0.99
SSPN-208ENST00000544231 TMEM131LA2VDJ0 1609 aa21.23■□□□□ 0.99
SSPN-208ENST00000544231 ZNF326Q5BKZ1 582 aaKnown RBP21.22■□□□□ 0.99
SSPN-208ENST00000544231 HDGFP51858 240 aaKnown RBP21.21■□□□□ 0.99
SSPN-208ENST00000544231 SPATA31E1Q6ZUB1 1445 aa21.21■□□□□ 0.99
SSPN-208ENST00000544231 RPGRIP1LQ68CZ1 1315 aa21.2■□□□□ 0.98
SSPN-208ENST00000544231 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
SSPN-208ENST00000544231 SIN3AQ96ST3 1273 aa21.19■□□□□ 0.98
SSPN-208ENST00000544231 TMEM2Q9UHN6 1383 aa21.19■□□□□ 0.98
SSPN-208ENST00000544231 EID1Q9Y6B2 187 aa21.18■□□□□ 0.98
SSPN-208ENST00000544231 RGL3Q3MIN7 710 aa21.17■□□□□ 0.98
SSPN-208ENST00000544231 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
SSPN-208ENST00000544231 SLIT1O75093 1534 aa21.17■□□□□ 0.98
SSPN-208ENST00000544231 ARHGAP23Q9P227 1491 aa21.16■□□□□ 0.98
SSPN-208ENST00000544231 RIMS2Q9UQ26 1411 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms