RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 RNF17Q9BXT8 1623 aaKnown RBP24.43■■□□□ 1.5
LDHB-210ENST00000544151 STRCQ7RTU9 1775 aa24.42■■□□□ 1.5
LDHB-210ENST00000544151 TCOF1Q13428 1488 aaKnown RBP24.42■■□□□ 1.5
LDHB-210ENST00000544151 ZNF142P52746 1687 aaPredicted RBP24.41■■□□□ 1.5
LDHB-210ENST00000544151 KIF3BO15066 747 aa24.41■■□□□ 1.5
LDHB-210ENST00000544151 DAPK1P53355 1430 aa24.38■■□□□ 1.49
LDHB-210ENST00000544151 ZC3H13Q5T200 1668 aaKnown RBP24.38■■□□□ 1.49
LDHB-210ENST00000544151 PPP6R1Q9UPN7 881 aa24.38■■□□□ 1.49
LDHB-210ENST00000544151 ABCC5O15440 1437 aa24.37■■□□□ 1.49
LDHB-210ENST00000544151 PTPRKQ15262 1439 aa24.37■■□□□ 1.49
LDHB-210ENST00000544151 DUOX2Q9NRD8 1548 aa24.37■■□□□ 1.49
LDHB-210ENST00000544151 CEP170BQ9Y4F5 1589 aaPredicted RBP24.35■■□□□ 1.49
LDHB-210ENST00000544151 CEP152O94986 1710 aa24.34■■□□□ 1.49
LDHB-210ENST00000544151 MROH1Q8NDA8 1641 aa24.34■■□□□ 1.49
LDHB-210ENST00000544151 PZPP20742 1482 aa24.32■■□□□ 1.48
LDHB-210ENST00000544151 CAMSAP1Q5T5Y3 1602 aa24.32■■□□□ 1.48
LDHB-210ENST00000544151 KIF15Q9NS87 1388 aa24.31■■□□□ 1.48
LDHB-210ENST00000544151 WASHC2CQ9Y4E1 1318 aa24.3■■□□□ 1.48
LDHB-210ENST00000544151 ABCC3O15438 1527 aa24.3■■□□□ 1.48
LDHB-210ENST00000544151 ERBINQ96RT1 1412 aa24.28■■□□□ 1.48
LDHB-210ENST00000544151 ILDR1Q86SU0 546 aaPredicted RBP24.28■■□□□ 1.48
LDHB-210ENST00000544151 NCOA1Q15788 1441 aa24.27■■□□□ 1.48
LDHB-210ENST00000544151 PRDM15P57071 1507 aaPredicted RBP24.27■■□□□ 1.48
LDHB-210ENST00000544151 DEPDC5O75140 1603 aa24.25■■□□□ 1.47
LDHB-210ENST00000544151 FAM50AQ14320 339 aaKnown RBP24.23■■□□□ 1.47
LDHB-210ENST00000544151 RRP7BPQ9NSQ0 103 aa24.23■■□□□ 1.47
LDHB-210ENST00000544151 A2ML1A8K2U0 1454 aa24.23■■□□□ 1.47
LDHB-210ENST00000544151 TNRQ92752 1358 aa24.22■■□□□ 1.47
LDHB-210ENST00000544151 ANKRD30AQ9BXX3 1397 aa24.22■■□□□ 1.47
LDHB-210ENST00000544151 CHIC2Q9UKJ5 165 aa24.21■■□□□ 1.47
LDHB-210ENST00000544151 CFAP65Q6ZU64 1925 aaKnown RBP24.21■■□□□ 1.47
LDHB-210ENST00000544151 ADGRL2O95490 1459 aa24.2■■□□□ 1.47
LDHB-210ENST00000544151 PLA2R1Q13018 1463 aa24.2■■□□□ 1.47
LDHB-210ENST00000544151 FBXO31Q5XUX0 539 aaPredicted RBP24.2■■□□□ 1.46
LDHB-210ENST00000544151 DMRT2Q9Y5R5 561 aa24.2■■□□□ 1.46
LDHB-210ENST00000544151 PTPRTO14522 1441 aa24.19■■□□□ 1.46
LDHB-210ENST00000544151 POLR1AO95602 1720 aaPredicted RBP24.19■■□□□ 1.46
LDHB-210ENST00000544151 SPATA31D1Q6ZQQ2 1576 aa24.18■■□□□ 1.46
LDHB-210ENST00000544151 ERVK-7P63135 1459 aa24.15■■□□□ 1.46
LDHB-210ENST00000544151 NLRP1Q9C000 1473 aa24.15■■□□□ 1.46
LDHB-210ENST00000544151 PPARGC1BQ86YN6 1023 aaKnown RBP24.12■■□□□ 1.45
LDHB-210ENST00000544151 UGGT1Q9NYU2 1555 aa24.12■■□□□ 1.45
LDHB-210ENST00000544151 FBXO41Q8TF61 875 aa24.11■■□□□ 1.45
LDHB-210ENST00000544151 NCKAP5LQ9HCH0 1330 aa24.1■■□□□ 1.45
LDHB-210ENST00000544151 VWDEQ8N2E2 1590 aa24.09■■□□□ 1.45
LDHB-210ENST00000544151 KANK1Q14678 1352 aa24.09■■□□□ 1.45
LDHB-210ENST00000544151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.09■■□□□ 1.45
LDHB-210ENST00000544151 LMTK2Q8IWU2 1503 aa24.07■■□□□ 1.44
LDHB-210ENST00000544151 ADRA2BP18089 450 aa24.07■■□□□ 1.44
LDHB-210ENST00000544151 CERKQ8TCT0 537 aa24.07■■□□□ 1.44
LDHB-210ENST00000544151 ARHGAP31Q2M1Z3 1444 aa24.07■■□□□ 1.44
LDHB-210ENST00000544151 NEURL4Q96JN8 1562 aa24.07■■□□□ 1.44
LDHB-210ENST00000544151 PKD2Q13563 968 aa24.06■■□□□ 1.44
LDHB-210ENST00000544151 ANKRD50Q9ULJ7 1429 aa24.06■■□□□ 1.44
LDHB-210ENST00000544151 UBR1Q8IWV7 1749 aa24.06■■□□□ 1.44
LDHB-210ENST00000544151 LTBP4Q8N2S1 1624 aa24.05■■□□□ 1.44
LDHB-210ENST00000544151 EFCAB6Q5THR3 1501 aa24.05■■□□□ 1.44
LDHB-210ENST00000544151 UNC13BO14795 1591 aa24.03■■□□□ 1.44
LDHB-210ENST00000544151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.03■■□□□ 1.44
LDHB-210ENST00000544151 ROCK1Q13464 1354 aa24■■□□□ 1.43
LDHB-210ENST00000544151 PIK3C2BO00750 1634 aa23.99■■□□□ 1.43
LDHB-210ENST00000544151 TET3O43151 1660 aa23.99■■□□□ 1.43
LDHB-210ENST00000544151 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
LDHB-210ENST00000544151 IQGAP1P46940 1657 aa23.98■■□□□ 1.43
LDHB-210ENST00000544151 ITGAEP38570 1179 aa23.97■■□□□ 1.43
LDHB-210ENST00000544151 THEMISQ8N1K5 641 aaPredicted RBP23.97■■□□□ 1.43
LDHB-210ENST00000544151 SYNMO15061 1565 aa23.96■■□□□ 1.43
LDHB-210ENST00000544151 ZNF335Q9H4Z2 1342 aaPredicted RBP23.95■■□□□ 1.42
LDHB-210ENST00000544151 RRBP1Q9P2E9 1410 aaKnown RBP23.94■■□□□ 1.42
LDHB-210ENST00000544151 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
LDHB-210ENST00000544151 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
LDHB-210ENST00000544151 ANKLE2Q86XL3 938 aa23.92■■□□□ 1.42
LDHB-210ENST00000544151 MED14O60244 1454 aa23.92■■□□□ 1.42
LDHB-210ENST00000544151 IQSEC2Q5JU85 1478 aa23.92■■□□□ 1.42
LDHB-210ENST00000544151 RPRD2Q5VT52 1461 aaKnown RBP23.91■■□□□ 1.42
LDHB-210ENST00000544151 NPHP4O75161 1426 aaPredicted RBP23.91■■□□□ 1.42
LDHB-210ENST00000544151 E9PCH4 1651 aa23.89■■□□□ 1.42
LDHB-210ENST00000544151 NOS1P29475 1434 aa23.89■■□□□ 1.41
LDHB-210ENST00000544151 SLIT1O75093 1534 aa23.89■■□□□ 1.41
LDHB-210ENST00000544151 ADGRB3O60242 1522 aa23.88■■□□□ 1.41
LDHB-210ENST00000544151 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
LDHB-210ENST00000544151 ARHGAP23Q9P227 1491 aa23.87■■□□□ 1.41
LDHB-210ENST00000544151 MYO5BQ9ULV0 1848 aa23.85■■□□□ 1.41
LDHB-210ENST00000544151 STAG3Q9UJ98 1225 aa23.83■■□□□ 1.41
LDHB-210ENST00000544151 CPS1P31327 1500 aa23.83■■□□□ 1.41
LDHB-210ENST00000544151 STRCP1A6NGW2 1772 aa23.8■■□□□ 1.4
LDHB-210ENST00000544151 IDI1Q13907 227 aa23.79■■□□□ 1.4
LDHB-210ENST00000544151 NUP155O75694 1391 aa23.78■■□□□ 1.4
LDHB-210ENST00000544151 TMEM2Q9UHN6 1383 aa23.78■■□□□ 1.4
LDHB-210ENST00000544151 SPHKAPQ2M3C7 1700 aa23.76■■□□□ 1.39
LDHB-210ENST00000544151 TMEM131LA2VDJ0 1609 aa23.75■■□□□ 1.39
LDHB-210ENST00000544151 LTKP29376 864 aa23.75■■□□□ 1.39
LDHB-210ENST00000544151 TXNDC2Q86VQ3 553 aa23.75■■□□□ 1.39
LDHB-210ENST00000544151 SLC52A1Q9NWF4 448 aa23.75■■□□□ 1.39
LDHB-210ENST00000544151 EID1Q9Y6B2 187 aa23.75■■□□□ 1.39
LDHB-210ENST00000544151 NAIPQ13075 1403 aa23.75■■□□□ 1.39
LDHB-210ENST00000544151 HFM1A2PYH4 1435 aa23.69■■□□□ 1.38
LDHB-210ENST00000544151 UBAP1LF5GYI3 381 aa23.67■■□□□ 1.38
LDHB-210ENST00000544151 ZFYVE9O95405 1425 aa23.66■■□□□ 1.38
LDHB-210ENST00000544151 LRRC7Q96NW7 1537 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms