RNA–Protein interactions for RNA: ENST00000543888.1

C2CD5-217, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 4

Gene C2CD5, Length 572 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-217ENST00000543888 TYW1BQ6NUM6 668 aa8.23□□□□□ -1.09
C2CD5-217ENST00000543888 SLAIN1Q8ND83 568 aa8.23□□□□□ -1.09
C2CD5-217ENST00000543888 PCDHGA10Q9Y5H3 936 aa8.23□□□□□ -1.09
C2CD5-217ENST00000543888 NPDC1Q9NQX5 325 aaPredicted RBP8.22□□□□□ -1.09
C2CD5-217ENST00000543888 PLEKHG3A1L390 1219 aa8.21□□□□□ -1.1
C2CD5-217ENST00000543888 TSR1Q2NL82 804 aaKnown RBP8.21□□□□□ -1.1
C2CD5-217ENST00000543888 FBXW7Q969H0 707 aa8.2□□□□□ -1.1
C2CD5-217ENST00000543888 JPH4Q96JJ6 628 aa8.19□□□□□ -1.1
C2CD5-217ENST00000543888 SUPT5HO00267 1087 aaKnown RBP8.18□□□□□ -1.1
C2CD5-217ENST00000543888 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
C2CD5-217ENST00000543888 GIGYF2Q6Y7W6 1299 aaKnown RBP8.18□□□□□ -1.1
C2CD5-217ENST00000543888 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
C2CD5-217ENST00000543888 MS4A1P11836 297 aa8.16□□□□□ -1.1
C2CD5-217ENST00000543888 FOSBP53539 338 aa8.16□□□□□ -1.1
C2CD5-217ENST00000543888 FAM163AQ96GL9 167 aaPredicted RBP8.16□□□□□ -1.1
C2CD5-217ENST00000543888 REPIN1Q9BWE0 567 aaKnown RBP8.16□□□□□ -1.1
C2CD5-217ENST00000543888 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
C2CD5-217ENST00000543888 NUDT7P0C024 238 aa8.15□□□□□ -1.1
C2CD5-217ENST00000543888 CLCN1P35523 988 aa8.15□□□□□ -1.1
C2CD5-217ENST00000543888 MDM2Q00987 491 aaPredicted RBP8.15□□□□□ -1.1
C2CD5-217ENST00000543888 DOK7Q18PE1 504 aa8.15□□□□□ -1.1
C2CD5-217ENST00000543888 C6orf132Q5T0Z8 1188 aa8.15□□□□□ -1.1
C2CD5-217ENST00000543888 ZDHHC16Q969W1 377 aa8.15□□□□□ -1.1
C2CD5-217ENST00000543888 FAM161AQ3B820 660 aa8.14□□□□□ -1.11
C2CD5-217ENST00000543888 ARSIQ5FYB1 569 aa8.14□□□□□ -1.11
C2CD5-217ENST00000543888 CERKQ8TCT0 537 aa8.14□□□□□ -1.11
C2CD5-217ENST00000543888 KHSRPQ92945 711 aaKnown RBP eCLIP8.14□□□□□ -1.11
C2CD5-217ENST00000543888 GPCPD1Q9NPB8 672 aa8.14□□□□□ -1.11
C2CD5-217ENST00000543888 PADI6Q6TGC4 694 aa8.13□□□□□ -1.11
C2CD5-217ENST00000543888 ARXQ96QS3 562 aa8.13□□□□□ -1.11
C2CD5-217ENST00000543888 PHOX2BQ99453 314 aa8.13□□□□□ -1.11
C2CD5-217ENST00000543888 RIMBP2O15034 1052 aa8.12□□□□□ -1.11
C2CD5-217ENST00000543888 OATP04181 439 aa8.12□□□□□ -1.11
C2CD5-217ENST00000543888 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
C2CD5-217ENST00000543888 TMUB1Q9BVT8 246 aa8.11□□□□□ -1.11
C2CD5-217ENST00000543888 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
C2CD5-217ENST00000543888 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
C2CD5-217ENST00000543888 POTEJP0CG39 1038 aa8.1□□□□□ -1.11
C2CD5-217ENST00000543888 HOXB3P14651 431 aaPredicted RBP8.1□□□□□ -1.11
C2CD5-217ENST00000543888 SSTR3P32745 418 aaPredicted RBP8.1□□□□□ -1.11
C2CD5-217ENST00000543888 METTL3Q86U44 580 aaKnown RBP8.1□□□□□ -1.11
C2CD5-217ENST00000543888 ZNF710Q8N1W2 664 aa8.1□□□□□ -1.11
C2CD5-217ENST00000543888 NLRP7Q8WX94 980 aa8.1□□□□□ -1.11
C2CD5-217ENST00000543888 ADAM33Q9BZ11 813 aa8.1□□□□□ -1.11
C2CD5-217ENST00000543888 ZSWIM6Q9HCJ5 1215 aa8.09□□□□□ -1.11
C2CD5-217ENST00000543888 ADGRG1Q9Y653 693 aa8.09□□□□□ -1.11
C2CD5-217ENST00000543888 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
C2CD5-217ENST00000543888 SCUBE2Q9NQ36 999 aa8.08□□□□□ -1.12
C2CD5-217ENST00000543888 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
C2CD5-217ENST00000543888 PRSS12P56730 875 aa8.07□□□□□ -1.12
C2CD5-217ENST00000543888 SH3D19Q5HYK7 790 aa8.07□□□□□ -1.12
C2CD5-217ENST00000543888 PXYLP1Q8TE99 480 aa8.07□□□□□ -1.12
C2CD5-217ENST00000543888 BEGAINQ9BUH8 593 aa8.07□□□□□ -1.12
C2CD5-217ENST00000543888 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
C2CD5-217ENST00000543888 RBM27Q9P2N5 1060 aaKnown RBP8.07□□□□□ -1.12
C2CD5-217ENST00000543888 FLIIQ13045 1269 aa8.06□□□□□ -1.12
C2CD5-217ENST00000543888 TTC13Q8NBP0 860 aa8.06□□□□□ -1.12
C2CD5-217ENST00000543888 RBM46Q8TBY0 533 aaKnown RBP8.06□□□□□ -1.12
C2CD5-217ENST00000543888 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
C2CD5-217ENST00000543888 FAM217BQ9NTX9 383 aaPredicted RBP8.06□□□□□ -1.12
C2CD5-217ENST00000543888 LHX6Q9UPM6 363 aa8.06□□□□□ -1.12
C2CD5-217ENST00000543888 PPP4R3BQ5MIZ7 849 aa8.05□□□□□ -1.12
C2CD5-217ENST00000543888 MAMSTRQ6ZN01 415 aa8.05□□□□□ -1.12
C2CD5-217ENST00000543888 CDAN1Q8IWY9 1227 aa8.05□□□□□ -1.12
C2CD5-217ENST00000543888 HOMEZQ8IX15 550 aa8.05□□□□□ -1.12
C2CD5-217ENST00000543888 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
C2CD5-217ENST00000543888 PSDA5PKW4 1024 aaPredicted RBP8.02□□□□□ -1.13
C2CD5-217ENST00000543888 COL9A1P20849 921 aa8.02□□□□□ -1.13
C2CD5-217ENST00000543888 POLR3EQ9NVU0 708 aa8.02□□□□□ -1.13
C2CD5-217ENST00000543888 BCL2L12Q9HB09 334 aa8.01□□□□□ -1.13
C2CD5-217ENST00000543888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8□□□□□ -1.13
C2CD5-217ENST00000543888 PTPREP23469 700 aa8□□□□□ -1.13
C2CD5-217ENST00000543888 PROCA1Q8NCQ7 364 aaPredicted RBP8□□□□□ -1.13
C2CD5-217ENST00000543888 FAM198AQ9UFP1 575 aa8□□□□□ -1.13
C2CD5-217ENST00000543888 RCCD1A6NED2 376 aa7.99□□□□□ -1.13
C2CD5-217ENST00000543888 PPP1R3GB7ZBB8 358 aa7.99□□□□□ -1.13
C2CD5-217ENST00000543888 SNPHO15079 494 aa7.99□□□□□ -1.13
C2CD5-217ENST00000543888 ONECUT3O60422 494 aaPredicted RBP7.98□□□□□ -1.13
C2CD5-217ENST00000543888 MYSM1Q5VVJ2 828 aa7.98□□□□□ -1.13
C2CD5-217ENST00000543888 TBC1D2Q9BYX2 928 aa7.98□□□□□ -1.13
C2CD5-217ENST00000543888 TSKSQ9UJT2 592 aa7.98□□□□□ -1.13
C2CD5-217ENST00000543888 CLK2P49760 499 aaKnown RBP7.97□□□□□ -1.13
C2CD5-217ENST00000543888 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
C2CD5-217ENST00000543888 EYA1Q99502 592 aa7.97□□□□□ -1.13
C2CD5-217ENST00000543888 PNMA3Q9UL41 463 aa7.97□□□□□ -1.13
C2CD5-217ENST00000543888 NBPF26B4DH59 902 aa7.96□□□□□ -1.14
C2CD5-217ENST00000543888 HOXB1P14653 301 aaPredicted RBP7.96□□□□□ -1.14
C2CD5-217ENST00000543888 UBTFP17480 764 aaKnown RBP7.96□□□□□ -1.14
C2CD5-217ENST00000543888 DIXDC1Q155Q3 683 aa7.96□□□□□ -1.14
C2CD5-217ENST00000543888 PACS2Q86VP3 889 aa7.96□□□□□ -1.14
C2CD5-217ENST00000543888 TRIM6-TRIM34B2RNG4 842 aa7.95□□□□□ -1.14
C2CD5-217ENST00000543888 DNAJB2P25686 324 aa7.95□□□□□ -1.14
C2CD5-217ENST00000543888 TATDN2Q93075 761 aa7.95□□□□□ -1.14
C2CD5-217ENST00000543888 DDX11L8A8MPP1 907 aa7.94□□□□□ -1.14
C2CD5-217ENST00000543888 C3orf80F5H4A9 247 aa7.94□□□□□ -1.14
C2CD5-217ENST00000543888 MCM6Q14566 821 aa7.94□□□□□ -1.14
C2CD5-217ENST00000543888 SULF1Q8IWU6 871 aa7.94□□□□□ -1.14
C2CD5-217ENST00000543888 CLUAP1Q96AJ1 413 aa7.94□□□□□ -1.14
C2CD5-217ENST00000543888 MMRN1Q13201 1228 aa7.93□□□□□ -1.14
C2CD5-217ENST00000543888 NUTM1Q86Y26 1132 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms