RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 HSPA2P54652 639 aa29.61■■■□□ 2.33
SPPL3-208ENST00000543854 DUOX2Q9NRD8 1548 aa29.6■■■□□ 2.33
SPPL3-208ENST00000543854 RNF17Q9BXT8 1623 aaKnown RBP29.6■■■□□ 2.33
SPPL3-208ENST00000543854 KIF15Q9NS87 1388 aa29.56■■■□□ 2.32
SPPL3-208ENST00000543854 FAM50AQ14320 339 aaKnown RBP29.52■■■□□ 2.32
SPPL3-208ENST00000543854 ZC3H13Q5T200 1668 aaKnown RBP29.52■■■□□ 2.32
SPPL3-208ENST00000543854 PTPRKQ15262 1439 aa29.52■■■□□ 2.32
SPPL3-208ENST00000543854 ERBINQ96RT1 1412 aa29.52■■■□□ 2.32
SPPL3-208ENST00000543854 MYO3AQ8NEV4 1616 aa29.51■■■□□ 2.31
SPPL3-208ENST00000543854 ANKRD30AQ9BXX3 1397 aa29.49■■■□□ 2.31
SPPL3-208ENST00000543854 WASHC2CQ9Y4E1 1318 aa29.48■■■□□ 2.31
SPPL3-208ENST00000543854 MROH1Q8NDA8 1641 aa29.48■■■□□ 2.31
SPPL3-208ENST00000543854 RRP7BPQ9NSQ0 103 aa29.47■■■□□ 2.31
SPPL3-208ENST00000543854 PZPP20742 1482 aa29.47■■■□□ 2.31
SPPL3-208ENST00000543854 ZNF142P52746 1687 aaPredicted RBP29.47■■■□□ 2.31
SPPL3-208ENST00000543854 ABCC3O15438 1527 aa29.45■■■□□ 2.31
SPPL3-208ENST00000543854 ADGRL2O95490 1459 aa29.45■■■□□ 2.31
SPPL3-208ENST00000543854 PRDM15P57071 1507 aaPredicted RBP29.44■■■□□ 2.3
SPPL3-208ENST00000543854 CHIC2Q9UKJ5 165 aa29.43■■■□□ 2.3
SPPL3-208ENST00000543854 NCOA1Q15788 1441 aa29.42■■■□□ 2.3
SPPL3-208ENST00000543854 CEP170BQ9Y4F5 1589 aaPredicted RBP29.42■■■□□ 2.3
SPPL3-208ENST00000543854 PPARGC1BQ86YN6 1023 aaKnown RBP29.41■■■□□ 2.3
SPPL3-208ENST00000543854 DEPDC5O75140 1603 aa29.41■■■□□ 2.3
SPPL3-208ENST00000543854 CEP152O94986 1710 aa29.4■■■□□ 2.3
SPPL3-208ENST00000543854 STRCQ7RTU9 1775 aa29.39■■■□□ 2.3
SPPL3-208ENST00000543854 CAMSAP1Q5T5Y3 1602 aa29.38■■■□□ 2.29
SPPL3-208ENST00000543854 TNRQ92752 1358 aa29.36■■■□□ 2.29
SPPL3-208ENST00000543854 A2ML1A8K2U0 1454 aa29.32■■■□□ 2.28
SPPL3-208ENST00000543854 FBXO31Q5XUX0 539 aaPredicted RBP29.32■■■□□ 2.28
SPPL3-208ENST00000543854 KANK1Q14678 1352 aa29.3■■■□□ 2.28
SPPL3-208ENST00000543854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.3■■■□□ 2.287e-9■□□□□ 11
SPPL3-208ENST00000543854 DMRT2Q9Y5R5 561 aa29.29■■■□□ 2.28
SPPL3-208ENST00000543854 SPATA31D1Q6ZQQ2 1576 aa29.29■■■□□ 2.28
SPPL3-208ENST00000543854 PLA2R1Q13018 1463 aa29.28■■■□□ 2.28
SPPL3-208ENST00000543854 ANKRD50Q9ULJ7 1429 aa29.28■■■□□ 2.28
SPPL3-208ENST00000543854 ERVK-7P63135 1459 aa29.27■■■□□ 2.28
SPPL3-208ENST00000543854 NLRP1Q9C000 1473 aa29.27■■■□□ 2.28
SPPL3-208ENST00000543854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.26■■■□□ 2.27
SPPL3-208ENST00000543854 ROCK1Q13464 1354 aa29.26■■■□□ 2.27
SPPL3-208ENST00000543854 VWDEQ8N2E2 1590 aa29.25■■■□□ 2.27
SPPL3-208ENST00000543854 PTPRTO14522 1441 aa29.24■■■□□ 2.27
SPPL3-208ENST00000543854 ARHGAP31Q2M1Z3 1444 aa29.23■■■□□ 2.27
SPPL3-208ENST00000543854 LMTK2Q8IWU2 1503 aa29.23■■■□□ 2.27
SPPL3-208ENST00000543854 RRBP1Q9P2E9 1410 aaKnown RBP29.22■■■□□ 2.27
SPPL3-208ENST00000543854 ITGAEP38570 1179 aa29.19■■■□□ 2.26
SPPL3-208ENST00000543854 UGGT1Q9NYU2 1555 aa29.18■■■□□ 2.26
SPPL3-208ENST00000543854 EFCAB6Q5THR3 1501 aa29.17■■■□□ 2.26
SPPL3-208ENST00000543854 CFAP65Q6ZU64 1925 aaKnown RBP29.17■■■□□ 2.26
SPPL3-208ENST00000543854 UNC13BO14795 1591 aa29.17■■■□□ 2.26
SPPL3-208ENST00000543854 POLR1AO95602 1720 aaPredicted RBP29.15■■■□□ 2.26
SPPL3-208ENST00000543854 PKD2Q13563 968 aa29.15■■■□□ 2.26
SPPL3-208ENST00000543854 NCKAP5LQ9HCH0 1330 aa29.14■■■□□ 2.25
SPPL3-208ENST00000543854 ILDR1Q86SU0 546 aaPredicted RBP29.11■■■□□ 2.25
SPPL3-208ENST00000543854 TET3O43151 1660 aa29.09■■■□□ 2.25
SPPL3-208ENST00000543854 THEMISQ8N1K5 641 aaPredicted RBP29.09■■■□□ 2.25
SPPL3-208ENST00000543854 UBR1Q8IWV7 1749 aa29.07■■■□□ 2.24
SPPL3-208ENST00000543854 GCC2Q8IWJ2 1684 aa29.06■■■□□ 2.24
SPPL3-208ENST00000543854 NEURL4Q96JN8 1562 aa29.06■■■□□ 2.24
SPPL3-208ENST00000543854 RPRD2Q5VT52 1461 aaKnown RBP29.05■■■□□ 2.24
SPPL3-208ENST00000543854 IQGAP3Q86VI3 1631 aa29.04■■■□□ 2.24
SPPL3-208ENST00000543854 CERKQ8TCT0 537 aa29.03■■■□□ 2.24
SPPL3-208ENST00000543854 SYNMO15061 1565 aa29.03■■■□□ 2.24
SPPL3-208ENST00000543854 FBXO41Q8TF61 875 aa29.02■■■□□ 2.24
SPPL3-208ENST00000543854 PIK3C2BO00750 1634 aa29.02■■■□□ 2.24
SPPL3-208ENST00000543854 NOS1P29475 1434 aa29.01■■■□□ 2.23
SPPL3-208ENST00000543854 ANKLE2Q86XL3 938 aa29■■■□□ 2.23
SPPL3-208ENST00000543854 LTBP4Q8N2S1 1624 aa28.99■■■□□ 2.23
SPPL3-208ENST00000543854 KDM5AP29375 1690 aaKnown RBP28.97■■■□□ 2.23
SPPL3-208ENST00000543854 MED14O60244 1454 aa28.96■■■□□ 2.23
SPPL3-208ENST00000543854 NUP155O75694 1391 aa28.95■■■□□ 2.22
SPPL3-208ENST00000543854 IQGAP1P46940 1657 aa28.95■■■□□ 2.22
SPPL3-208ENST00000543854 NPHP4O75161 1426 aaPredicted RBP28.94■■■□□ 2.22
SPPL3-208ENST00000543854 E9PCH4 1651 aa28.94■■■□□ 2.22
SPPL3-208ENST00000543854 SLIT1O75093 1534 aa28.94■■■□□ 2.22
SPPL3-208ENST00000543854 ADGRB3O60242 1522 aa28.93■■■□□ 2.22
SPPL3-208ENST00000543854 NAIPQ13075 1403 aa28.93■■■□□ 2.22
SPPL3-208ENST00000543854 ZNF335Q9H4Z2 1342 aaPredicted RBP28.92■■■□□ 2.22
SPPL3-208ENST00000543854 SCAF11Q99590 1463 aaKnown RBP28.91■■■□□ 2.22
SPPL3-208ENST00000543854 ARHGAP23Q9P227 1491 aa28.91■■■□□ 2.22
SPPL3-208ENST00000543854 STAG3Q9UJ98 1225 aa28.91■■■□□ 2.22
SPPL3-208ENST00000543854 HFM1A2PYH4 1435 aa28.9■■■□□ 2.22
SPPL3-208ENST00000543854 IDI1Q13907 227 aa28.88■■■□□ 2.21
SPPL3-208ENST00000543854 IQSEC2Q5JU85 1478 aa28.87■■■□□ 2.21
SPPL3-208ENST00000543854 SLC52A1Q9NWF4 448 aa28.87■■■□□ 2.21
SPPL3-208ENST00000543854 TMEM2Q9UHN6 1383 aa28.86■■■□□ 2.21
SPPL3-208ENST00000543854 EID1Q9Y6B2 187 aa28.82■■■□□ 2.2
SPPL3-208ENST00000543854 TXNDC2Q86VQ3 553 aa28.81■■■□□ 2.2
SPPL3-208ENST00000543854 CPS1P31327 1500 aa28.8■■■□□ 2.2
SPPL3-208ENST00000543854 SPHKAPQ2M3C7 1700 aa28.78■■■□□ 2.2
SPPL3-208ENST00000543854 LTKP29376 864 aa28.78■■■□□ 2.2
SPPL3-208ENST00000543854 TMEM131LA2VDJ0 1609 aa28.78■■■□□ 2.2
SPPL3-208ENST00000543854 MYO5BQ9ULV0 1848 aa28.78■■■□□ 2.2
SPPL3-208ENST00000543854 ZFYVE9O95405 1425 aa28.69■■■□□ 2.18
SPPL3-208ENST00000543854 TRIM52Q96A61 297 aa28.69■■■□□ 2.18
SPPL3-208ENST00000543854 CHGAP10645 457 aaKnown RBP28.68■■■□□ 2.18
SPPL3-208ENST00000543854 STRCP1A6NGW2 1772 aa28.67■■■□□ 2.18
SPPL3-208ENST00000543854 TRPM2O94759 1503 aa28.67■■■□□ 2.18
SPPL3-208ENST00000543854 RIMS2Q9UQ26 1411 aa28.67■■■□□ 2.18
SPPL3-208ENST00000543854 CLTCL1P53675 1640 aa28.62■■■□□ 2.17
SPPL3-208ENST00000543854 PPP1R15AO75807 674 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms