RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 IQGAP1P46940 1657 aa14.64□□□□□ -0.07
CD4-211ENST00000543755 A2MP01023 1474 aa14.63□□□□□ -0.07
CD4-211ENST00000543755 PREX2Q70Z35 1606 aa14.63□□□□□ -0.07
CD4-211ENST00000543755 RXRBP28702 533 aa14.63□□□□□ -0.07
CD4-211ENST00000543755 SAMD9LQ8IVG5 1584 aa14.63□□□□□ -0.07
CD4-211ENST00000543755 FAM135AQ9P2D6 1515 aa14.62□□□□□ -0.07
CD4-211ENST00000543755 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
CD4-211ENST00000543755 DEPDC5O75140 1603 aa14.61□□□□□ -0.07
CD4-211ENST00000543755 JCADQ9P266 1359 aa14.6□□□□□ -0.07
CD4-211ENST00000543755 UGGT1Q9NYU2 1555 aa14.6□□□□□ -0.07
CD4-211ENST00000543755 FOXD1Q16676 465 aa14.59□□□□□ -0.07
CD4-211ENST00000543755 ATP7AQ04656 1500 aa14.59□□□□□ -0.07
CD4-211ENST00000543755 PLXNC1O60486 1568 aa14.59□□□□□ -0.07
CD4-211ENST00000543755 ROBO1Q9Y6N7 1651 aa14.58□□□□□ -0.07
CD4-211ENST00000543755 HNRNPMP52272 730 aaKnown RBP eCLIP14.57□□□□□ -0.08
CD4-211ENST00000543755 NLRP1Q9C000 1473 aa14.57□□□□□ -0.08
CD4-211ENST00000543755 NUTM2BA6NNL0 878 aaPredicted RBP14.55□□□□□ -0.08
CD4-211ENST00000543755 NUTM2EB1AL46 878 aaPredicted RBP14.55□□□□□ -0.08
CD4-211ENST00000543755 NUTM2DQ5VT03 806 aaPredicted RBP14.55□□□□□ -0.08
CD4-211ENST00000543755 NUTM2AQ8IVF1 878 aaPredicted RBP14.55□□□□□ -0.08
CD4-211ENST00000543755 RBM33Q96EV2 1170 aaKnown RBP14.55□□□□□ -0.08
CD4-211ENST00000543755 SYCP2Q9BX26 1530 aa14.55□□□□□ -0.08
CD4-211ENST00000543755 SETBP1Q9Y6X0 1596 aa14.55□□□□□ -0.08
CD4-211ENST00000543755 LRP6O75581 1613 aa14.55□□□□□ -0.08
CD4-211ENST00000543755 PZPP20742 1482 aa14.53□□□□□ -0.08
CD4-211ENST00000543755 MIA2Q96PC5 1412 aa14.53□□□□□ -0.08
CD4-211ENST00000543755 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
CD4-211ENST00000543755 CDK12Q9NYV4 1490 aaPredicted RBP14.52□□□□□ -0.08
CD4-211ENST00000543755 WASHC2CQ9Y4E1 1318 aa14.52□□□□□ -0.08
CD4-211ENST00000543755 PLEKHH2Q8IVE3 1493 aa14.51□□□□□ -0.09
CD4-211ENST00000543755 TMEM94Q12767 1356 aa14.51□□□□□ -0.09
CD4-211ENST00000543755 PHLPP1O60346 1717 aa14.51□□□□□ -0.09
CD4-211ENST00000543755 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
CD4-211ENST00000543755 EEA1Q15075 1411 aa14.5□□□□□ -0.09
CD4-211ENST00000543755 SPATA31A6Q5VVP1 1343 aa14.5□□□□□ -0.09
CD4-211ENST00000543755 ADGBQ8N7X0 1667 aa14.5□□□□□ -0.09
CD4-211ENST00000543755 KDM5DQ9BY66 1539 aa14.5□□□□□ -0.09
CD4-211ENST00000543755 XIRP1Q702N8 1843 aaKnown RBP14.5□□□□□ -0.09
CD4-211ENST00000543755 LRRC9Q6ZRR7 1453 aa14.5□□□□□ -0.09
CD4-211ENST00000543755 CDC42BPAQ5VT25 1732 aa14.49□□□□□ -0.09
CD4-211ENST00000543755 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
CD4-211ENST00000543755 KIF3BO15066 747 aa14.48□□□□□ -0.09
CD4-211ENST00000543755 RGS12O14924 1447 aa14.48□□□□□ -0.09
CD4-211ENST00000543755 ZC3H13Q5T200 1668 aaKnown RBP14.47□□□□□ -0.09
CD4-211ENST00000543755 CFDP1Q9UEE9 299 aaPredicted RBP14.47□□□□□ -0.09
CD4-211ENST00000543755 CCDC18Q5T9S5 1454 aa14.46□□□□□ -0.09
CD4-211ENST00000543755 UBTFP17480 764 aaKnown RBP14.45□□□□□ -0.1
CD4-211ENST00000543755 PROSER2Q86WR7 435 aaPredicted RBP14.45□□□□□ -0.1
CD4-211ENST00000543755 DHX29Q7Z478 1369 aaKnown RBP14.45□□□□□ -0.1
CD4-211ENST00000543755 SCAF11Q99590 1463 aaKnown RBP14.44□□□□□ -0.1
CD4-211ENST00000543755 AFF2P51816 1311 aa14.44□□□□□ -0.1
CD4-211ENST00000543755 SLAIN2Q9P270 581 aa14.44□□□□□ -0.1
CD4-211ENST00000543755 ATAD2Q6PL18 1390 aa14.44□□□□□ -0.1
CD4-211ENST00000543755 TXNDC2Q86VQ3 553 aa14.43□□□□□ -0.1
CD4-211ENST00000543755 EID1Q9Y6B2 187 aa14.43□□□□□ -0.1
CD4-211ENST00000543755 ARHGAP35Q9NRY4 1499 aa14.43□□□□□ -0.1
CD4-211ENST00000543755 GPATCH8Q9UKJ3 1502 aaKnown RBP14.42□□□□□ -0.1
CD4-211ENST00000543755 FGD6Q6ZV73 1430 aa14.41□□□□□ -0.1
CD4-211ENST00000543755 MAP3K1Q13233 1512 aa14.41□□□□□ -0.1
CD4-211ENST00000543755 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
CD4-211ENST00000543755 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
CD4-211ENST00000543755 LTKP29376 864 aa14.41□□□□□ -0.1
CD4-211ENST00000543755 RBM6P78332 1123 aaKnown RBP14.41□□□□□ -0.1
CD4-211ENST00000543755 MSH6P52701 1360 aa14.41□□□□□ -0.1
CD4-211ENST00000543755 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
CD4-211ENST00000543755 QTRT2Q9H974 415 aaKnown RBP14.39□□□□□ -0.11
CD4-211ENST00000543755 RTEL1-TNFRSF6BF6WH68 1400 aa14.39□□□□□ -0.11
CD4-211ENST00000543755 IFFO2Q5TF58 517 aa14.38□□□□□ -0.11
CD4-211ENST00000543755 KCNA6P17658 529 aa14.37□□□□□ -0.11
CD4-211ENST00000543755 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
CD4-211ENST00000543755 CASKIN1Q8WXD9 1431 aa14.35□□□□□ -0.11
CD4-211ENST00000543755 C8orf37Q96NL8 207 aa14.35□□□□□ -0.11
CD4-211ENST00000543755 PRDM15P57071 1507 aaPredicted RBP14.33□□□□□ -0.12
CD4-211ENST00000543755 NGLY1Q96IV0 654 aa14.33□□□□□ -0.12
CD4-211ENST00000543755 SHPRHQ149N8 1683 aa14.33□□□□□ -0.12
CD4-211ENST00000543755 NCOA2Q15596 1464 aa14.32□□□□□ -0.12
CD4-211ENST00000543755 TIAM1Q13009 1591 aa14.32□□□□□ -0.12
CD4-211ENST00000543755 SLC26A8Q96RN1 970 aa14.32□□□□□ -0.12
CD4-211ENST00000543755 YY1P25490 414 aa14.31□□□□□ -0.12
CD4-211ENST00000543755 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
CD4-211ENST00000543755 UBR1Q8IWV7 1749 aa14.31□□□□□ -0.12
CD4-211ENST00000543755 ERVK-7P63135 1459 aa14.31□□□□□ -0.12
CD4-211ENST00000543755 SLIT1O75093 1534 aa14.31□□□□□ -0.12
CD4-211ENST00000543755 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
CD4-211ENST00000543755 C14orf37Q86TY3 774 aa14.29□□□□□ -0.12
CD4-211ENST00000543755 ZNF644Q9H582 1327 aaPredicted RBP14.29□□□□□ -0.12
CD4-211ENST00000543755 NKTRP30414 1462 aaKnown RBP14.28□□□□□ -0.12
CD4-211ENST00000543755 CCDC125Q86Z20 511 aa14.28□□□□□ -0.12
CD4-211ENST00000543755 BCANQ96GW7 911 aa14.28□□□□□ -0.12
CD4-211ENST00000543755 LRP5O75197 1615 aa14.27□□□□□ -0.12
CD4-211ENST00000543755 ABCC3O15438 1527 aa14.27□□□□□ -0.12
CD4-211ENST00000543755 MBD5Q9P267 1494 aa14.27□□□□□ -0.12
CD4-211ENST00000543755 RSPH4AQ5TD94 716 aa14.26□□□□□ -0.13
CD4-211ENST00000543755 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
CD4-211ENST00000543755 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
CD4-211ENST00000543755 MTUS2Q5JR59 1369 aa14.24□□□□□ -0.13
CD4-211ENST00000543755 TMEM2Q9UHN6 1383 aa14.24□□□□□ -0.13
CD4-211ENST00000543755 TSPY4P0CV99 314 aa14.24□□□□□ -0.13
CD4-211ENST00000543755 TSPY10P0CW01 314 aa14.24□□□□□ -0.13
CD4-211ENST00000543755 CCDC141Q6ZP82 1450 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms