RNA–Protein interactions for RNA: ENST00000543694.1

LRTM2-206, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-206ENST00000543694 RNF17Q9BXT8 1623 aaKnown RBP24.06■■□□□ 1.44
LRTM2-206ENST00000543694 PLEKHH2Q8IVE3 1493 aa24.04■■□□□ 1.44
LRTM2-206ENST00000543694 ADGBQ8N7X0 1667 aa24.04■■□□□ 1.44
LRTM2-206ENST00000543694 NPHP4O75161 1426 aaPredicted RBP24.02■■□□□ 1.44
LRTM2-206ENST00000543694 VPS8Q8N3P4 1428 aa24.02■■□□□ 1.44
LRTM2-206ENST00000543694 RGS17Q9UGC6 210 aaPredicted RBP24.02■■□□□ 1.44
LRTM2-206ENST00000543694 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.02■■□□□ 1.44
LRTM2-206ENST00000543694 SYNMO15061 1565 aa24.01■■□□□ 1.43
LRTM2-206ENST00000543694 KIAA1107Q9UPP5 1409 aa24.01■■□□□ 1.43
LRTM2-206ENST00000543694 DEPDC5O75140 1603 aa23.99■■□□□ 1.43
LRTM2-206ENST00000543694 THEMISQ8N1K5 641 aaPredicted RBP23.98■■□□□ 1.43
LRTM2-206ENST00000543694 CASKIN1Q8WXD9 1431 aa23.98■■□□□ 1.43
LRTM2-206ENST00000543694 MED14O60244 1454 aa23.98■■□□□ 1.43
LRTM2-206ENST00000543694 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
LRTM2-206ENST00000543694 IQGAP1P46940 1657 aa23.98■■□□□ 1.43
LRTM2-206ENST00000543694 LRRC7Q96NW7 1537 aa23.97■■□□□ 1.43
LRTM2-206ENST00000543694 FAM135AQ9P2D6 1515 aa23.97■■□□□ 1.43
LRTM2-206ENST00000543694 PZPP20742 1482 aa23.96■■□□□ 1.43
LRTM2-206ENST00000543694 UGGT1Q9NYU2 1555 aa23.95■■□□□ 1.43
LRTM2-206ENST00000543694 FBXO31Q5XUX0 539 aaPredicted RBP23.95■■□□□ 1.42
LRTM2-206ENST00000543694 CFDP1Q9UEE9 299 aaPredicted RBP23.94■■□□□ 1.42
LRTM2-206ENST00000543694 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
LRTM2-206ENST00000543694 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
LRTM2-206ENST00000543694 STRCP1A6NGW2 1772 aa23.91■■□□□ 1.42
LRTM2-206ENST00000543694 CCNB3Q8WWL7 1395 aa23.89■■□□□ 1.41
LRTM2-206ENST00000543694 POTEAQ6S8J7 498 aa23.88■■□□□ 1.41
LRTM2-206ENST00000543694 MIA2Q96PC5 1412 aa23.87■■□□□ 1.41
LRTM2-206ENST00000543694 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
LRTM2-206ENST00000543694 DHX29Q7Z478 1369 aaKnown RBP23.85■■□□□ 1.41
LRTM2-206ENST00000543694 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
LRTM2-206ENST00000543694 KIF3BO15066 747 aa23.84■■□□□ 1.41
LRTM2-206ENST00000543694 SETD1AO15047 1707 aaKnown RBP23.84■■□□□ 1.41
LRTM2-206ENST00000543694 APLP2Q06481 763 aa23.82■■□□□ 1.4
LRTM2-206ENST00000543694 RTEL1-TNFRSF6BF6WH68 1400 aa23.82■■□□□ 1.4
LRTM2-206ENST00000543694 MAP3K1Q13233 1512 aa23.79■■□□□ 1.4
LRTM2-206ENST00000543694 ZC3H13Q5T200 1668 aaKnown RBP23.77■■□□□ 1.4
LRTM2-206ENST00000543694 FAM135BQ49AJ0 1406 aa23.76■■□□□ 1.39
LRTM2-206ENST00000543694 MBD5Q9P267 1494 aa23.75■■□□□ 1.39
LRTM2-206ENST00000543694 ZNF644Q9H582 1327 aaPredicted RBP23.73■■□□□ 1.39
LRTM2-206ENST00000543694 MTUS2Q5JR59 1369 aa23.72■■□□□ 1.39
LRTM2-206ENST00000543694 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
LRTM2-206ENST00000543694 XIRP1Q702N8 1843 aaKnown RBP23.7■■□□□ 1.39
LRTM2-206ENST00000543694 TIAM1Q13009 1591 aa23.69■■□□□ 1.38
LRTM2-206ENST00000543694 CCDC141Q6ZP82 1450 aa23.68■■□□□ 1.38
LRTM2-206ENST00000543694 ROBO1Q9Y6N7 1651 aa23.67■■□□□ 1.38
LRTM2-206ENST00000543694 UBR1Q8IWV7 1749 aa23.65■■□□□ 1.38
LRTM2-206ENST00000543694 ERVK-7P63135 1459 aa23.65■■□□□ 1.38
LRTM2-206ENST00000543694 LRRC9Q6ZRR7 1453 aa23.63■■□□□ 1.37
LRTM2-206ENST00000543694 ABCC3O15438 1527 aa23.62■■□□□ 1.37
LRTM2-206ENST00000543694 TXNDC2Q86VQ3 553 aa23.61■■□□□ 1.37
LRTM2-206ENST00000543694 UPF1Q92900 1129 aaKnown RBP eCLIP23.61■■□□□ 1.37
LRTM2-206ENST00000543694 TMEM94Q12767 1356 aa23.6■■□□□ 1.37
LRTM2-206ENST00000543694 EHBP1L1Q8N3D4 1523 aa23.59■■□□□ 1.37
LRTM2-206ENST00000543694 EID1Q9Y6B2 187 aa23.59■■□□□ 1.37
LRTM2-206ENST00000543694 SLIT1O75093 1534 aa23.59■■□□□ 1.37
LRTM2-206ENST00000543694 ARHGAP23Q9P227 1491 aa23.58■■□□□ 1.37
LRTM2-206ENST00000543694 JCADQ9P266 1359 aa23.57■■□□□ 1.36
LRTM2-206ENST00000543694 LTKP29376 864 aa23.57■■□□□ 1.36
LRTM2-206ENST00000543694 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
LRTM2-206ENST00000543694 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
LRTM2-206ENST00000543694 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
LRTM2-206ENST00000543694 PHLPP1O60346 1717 aa23.56■■□□□ 1.36
LRTM2-206ENST00000543694 TRIM52Q96A61 297 aa23.54■■□□□ 1.36
LRTM2-206ENST00000543694 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
LRTM2-206ENST00000543694 TSPY4P0CV99 314 aa23.51■■□□□ 1.35
LRTM2-206ENST00000543694 TSPY10P0CW01 314 aa23.51■■□□□ 1.35
LRTM2-206ENST00000543694 ZNF772Q68DY9 489 aaPredicted RBP23.5■■□□□ 1.35
LRTM2-206ENST00000543694 PROSER2Q86WR7 435 aaPredicted RBP23.5■■□□□ 1.35
LRTM2-206ENST00000543694 CEP152O94986 1710 aa23.5■■□□□ 1.35
LRTM2-206ENST00000543694 CFAP65Q6ZU64 1925 aaKnown RBP23.49■■□□□ 1.35
LRTM2-206ENST00000543694 EIF2AK4Q9P2K8 1649 aaKnown RBP23.49■■□□□ 1.35
LRTM2-206ENST00000543694 MSH6P52701 1360 aa23.49■■□□□ 1.35
LRTM2-206ENST00000543694 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
LRTM2-206ENST00000543694 KCNA6P17658 529 aa23.47■■□□□ 1.35
LRTM2-206ENST00000543694 PRDM15P57071 1507 aaPredicted RBP23.46■■□□□ 1.35
LRTM2-206ENST00000543694 NKTRP30414 1462 aaKnown RBP23.45■■□□□ 1.34
LRTM2-206ENST00000543694 RBM33Q96EV2 1170 aaKnown RBP23.45■■□□□ 1.34
LRTM2-206ENST00000543694 STAG3Q9UJ98 1225 aa23.45■■□□□ 1.34
LRTM2-206ENST00000543694 TMEM2Q9UHN6 1383 aa23.44■■□□□ 1.34
LRTM2-206ENST00000543694 SPATA31A6Q5VVP1 1343 aa23.44■■□□□ 1.34
LRTM2-206ENST00000543694 LRP6O75581 1613 aa23.44■■□□□ 1.34
LRTM2-206ENST00000543694 MROH1Q8NDA8 1641 aa23.44■■□□□ 1.34
LRTM2-206ENST00000543694 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
LRTM2-206ENST00000543694 PIK3C2BO00750 1634 aa23.42■■□□□ 1.34
LRTM2-206ENST00000543694 COL16A1Q07092 1604 aaPredicted RBP23.42■■□□□ 1.34
LRTM2-206ENST00000543694 SLAIN2Q9P270 581 aa23.42■■□□□ 1.34
LRTM2-206ENST00000543694 NWD1Q149M9 1564 aa23.4■■□□□ 1.34
LRTM2-206ENST00000543694 RXRBP28702 533 aa23.4■■□□□ 1.34
LRTM2-206ENST00000543694 FGD6Q6ZV73 1430 aa23.4■■□□□ 1.34
LRTM2-206ENST00000543694 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.33
LRTM2-206ENST00000543694 MAST1Q9Y2H9 1570 aa23.38■■□□□ 1.33
LRTM2-206ENST00000543694 EFCAB6Q5THR3 1501 aa23.38■■□□□ 1.33
LRTM2-206ENST00000543694 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
LRTM2-206ENST00000543694 CDK12Q9NYV4 1490 aaPredicted RBP23.36■■□□□ 1.33
LRTM2-206ENST00000543694 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
LRTM2-206ENST00000543694 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
LRTM2-206ENST00000543694 TET3O43151 1660 aa23.34■■□□□ 1.33
LRTM2-206ENST00000543694 SHPRHQ149N8 1683 aa23.33■■□□□ 1.33
LRTM2-206ENST00000543694 BCANQ96GW7 911 aa23.33■■□□□ 1.33
LRTM2-206ENST00000543694 DUOX2Q9NRD8 1548 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms