RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 C3P01024 1663 aa16.81■□□□□ 0.28
DDB1-222ENST00000543627 SHANK2Q9UPX8 1470 aa16.81■□□□□ 0.28
DDB1-222ENST00000543627 DUOX2Q9NRD8 1548 aa16.8■□□□□ 0.28
DDB1-222ENST00000543627 FBXO31Q5XUX0 539 aaPredicted RBP16.8■□□□□ 0.28
DDB1-222ENST00000543627 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
DDB1-222ENST00000543627 LMTK3Q96Q04 1460 aa16.78■□□□□ 0.28
DDB1-222ENST00000543627 NCOA1Q15788 1441 aa16.78■□□□□ 0.28
DDB1-222ENST00000543627 PTPRKQ15262 1439 aa16.77■□□□□ 0.27
DDB1-222ENST00000543627 KANK1Q14678 1352 aa16.75■□□□□ 0.27
DDB1-222ENST00000543627 ERBINQ96RT1 1412 aa16.74■□□□□ 0.27
DDB1-222ENST00000543627 MROH2AA6NES4 1674 aa16.74■□□□□ 0.27
DDB1-222ENST00000543627 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
DDB1-222ENST00000543627 SETD1BQ9UPS6 1966 aaKnown RBP16.73■□□□□ 0.27
DDB1-222ENST00000543627 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
DDB1-222ENST00000543627 ANKRD50Q9ULJ7 1429 aa16.72■□□□□ 0.27
DDB1-222ENST00000543627 EIF2AK4Q9P2K8 1649 aaKnown RBP16.71■□□□□ 0.27
DDB1-222ENST00000543627 ADGRL2O95490 1459 aa16.71■□□□□ 0.27
DDB1-222ENST00000543627 NPATQ14207 1427 aa16.7■□□□□ 0.26
DDB1-222ENST00000543627 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
DDB1-222ENST00000543627 CFAP65Q6ZU64 1925 aaKnown RBP16.69■□□□□ 0.26
DDB1-222ENST00000543627 TNRQ92752 1358 aa16.69■□□□□ 0.26
DDB1-222ENST00000543627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.69■□□□□ 0.265e-11■■□□□ 11.4
DDB1-222ENST00000543627 RNF17Q9BXT8 1623 aaKnown RBP16.69■□□□□ 0.26
DDB1-222ENST00000543627 ABCC3O15438 1527 aa16.68■□□□□ 0.26
DDB1-222ENST00000543627 CEP152O94986 1710 aa16.67■□□□□ 0.26
DDB1-222ENST00000543627 PZPP20742 1482 aa16.67■□□□□ 0.26
DDB1-222ENST00000543627 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
DDB1-222ENST00000543627 MROH1Q8NDA8 1641 aa16.66■□□□□ 0.26
DDB1-222ENST00000543627 NCKAP5LQ9HCH0 1330 aa16.66■□□□□ 0.26
DDB1-222ENST00000543627 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
DDB1-222ENST00000543627 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
DDB1-222ENST00000543627 FAM135AQ9P2D6 1515 aa16.63■□□□□ 0.25
DDB1-222ENST00000543627 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
DDB1-222ENST00000543627 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
DDB1-222ENST00000543627 MYO3AQ8NEV4 1616 aa16.62■□□□□ 0.25
DDB1-222ENST00000543627 ZC3H13Q5T200 1668 aaKnown RBP16.62■□□□□ 0.25
DDB1-222ENST00000543627 NUP155O75694 1391 aa16.62■□□□□ 0.25
DDB1-222ENST00000543627 PRDM15P57071 1507 aaPredicted RBP16.61■□□□□ 0.25
DDB1-222ENST00000543627 THEMISQ8N1K5 641 aaPredicted RBP16.6■□□□□ 0.25
DDB1-222ENST00000543627 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
DDB1-222ENST00000543627 ERVK-7P63135 1459 aa16.59■□□□□ 0.25
DDB1-222ENST00000543627 DEPDC5O75140 1603 aa16.59■□□□□ 0.25
DDB1-222ENST00000543627 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.24
DDB1-222ENST00000543627 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
DDB1-222ENST00000543627 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
DDB1-222ENST00000543627 ARHGAP31Q2M1Z3 1444 aa16.55■□□□□ 0.24
DDB1-222ENST00000543627 UGGT1Q9NYU2 1555 aa16.55■□□□□ 0.24
DDB1-222ENST00000543627 NLRP1Q9C000 1473 aa16.54■□□□□ 0.24
DDB1-222ENST00000543627 NAIPQ13075 1403 aa16.54■□□□□ 0.24
DDB1-222ENST00000543627 STRCQ7RTU9 1775 aa16.54■□□□□ 0.24
DDB1-222ENST00000543627 PKD2Q13563 968 aa16.54■□□□□ 0.24
DDB1-222ENST00000543627 IDI1Q13907 227 aa16.54■□□□□ 0.24
DDB1-222ENST00000543627 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
DDB1-222ENST00000543627 SPATA31D1Q6ZQQ2 1576 aa16.54■□□□□ 0.24
DDB1-222ENST00000543627 VWDEQ8N2E2 1590 aa16.52■□□□□ 0.24
DDB1-222ENST00000543627 LMTK2Q8IWU2 1503 aa16.52■□□□□ 0.24
DDB1-222ENST00000543627 ZNF142P52746 1687 aaPredicted RBP16.52■□□□□ 0.23
DDB1-222ENST00000543627 UNC13BO14795 1591 aa16.51■□□□□ 0.23
DDB1-222ENST00000543627 EFCAB6Q5THR3 1501 aa16.5■□□□□ 0.23
DDB1-222ENST00000543627 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
DDB1-222ENST00000543627 BCANQ96GW7 911 aa16.5■□□□□ 0.23
DDB1-222ENST00000543627 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
DDB1-222ENST00000543627 SLC52A1Q9NWF4 448 aa16.49■□□□□ 0.23
DDB1-222ENST00000543627 EID1Q9Y6B2 187 aa16.49■□□□□ 0.23
DDB1-222ENST00000543627 HFM1A2PYH4 1435 aa16.48■□□□□ 0.23
DDB1-222ENST00000543627 PTPRTO14522 1441 aa16.48■□□□□ 0.23
DDB1-222ENST00000543627 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
DDB1-222ENST00000543627 TET3O43151 1660 aa16.47■□□□□ 0.23
DDB1-222ENST00000543627 FBXO41Q8TF61 875 aa16.47■□□□□ 0.23
DDB1-222ENST00000543627 CERKQ8TCT0 537 aa16.46■□□□□ 0.23
DDB1-222ENST00000543627 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.23
DDB1-222ENST00000543627 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
DDB1-222ENST00000543627 NOS1P29475 1434 aa16.45■□□□□ 0.22
DDB1-222ENST00000543627 IQGAP3Q86VI3 1631 aa16.45■□□□□ 0.22
DDB1-222ENST00000543627 LTKP29376 864 aa16.45■□□□□ 0.22
DDB1-222ENST00000543627 PIK3C2BO00750 1634 aa16.45■□□□□ 0.22
DDB1-222ENST00000543627 SYNMO15061 1565 aa16.44■□□□□ 0.22
DDB1-222ENST00000543627 RPRD2Q5VT52 1461 aaKnown RBP16.44■□□□□ 0.22
DDB1-222ENST00000543627 FOXD1Q16676 465 aa16.44■□□□□ 0.22
DDB1-222ENST00000543627 NUTM2DQ5VT03 806 aaPredicted RBP16.44■□□□□ 0.22
DDB1-222ENST00000543627 E9PCH4 1651 aa16.43■□□□□ 0.22
DDB1-222ENST00000543627 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
DDB1-222ENST00000543627 UBR1Q8IWV7 1749 aa16.42■□□□□ 0.22
DDB1-222ENST00000543627 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
DDB1-222ENST00000543627 NPHP4O75161 1426 aaPredicted RBP16.42■□□□□ 0.22
DDB1-222ENST00000543627 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
DDB1-222ENST00000543627 TMEM2Q9UHN6 1383 aa16.4■□□□□ 0.22
DDB1-222ENST00000543627 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
DDB1-222ENST00000543627 HDGFP51858 240 aaKnown RBP16.39■□□□□ 0.21
DDB1-222ENST00000543627 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
DDB1-222ENST00000543627 SCAF11Q99590 1463 aaKnown RBP16.38■□□□□ 0.21
DDB1-222ENST00000543627 SLC26A8Q96RN1 970 aa16.38■□□□□ 0.21
DDB1-222ENST00000543627 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
DDB1-222ENST00000543627 NEURL4Q96JN8 1562 aa16.36■□□□□ 0.21
DDB1-222ENST00000543627 ADGRB3O60242 1522 aa16.35■□□□□ 0.21
DDB1-222ENST00000543627 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
DDB1-222ENST00000543627 SLIT1O75093 1534 aa16.34■□□□□ 0.21
DDB1-222ENST00000543627 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDB1-222ENST00000543627 ARHGAP23Q9P227 1491 aa16.33■□□□□ 0.2
DDB1-222ENST00000543627 IQGAP1P46940 1657 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms