RNA–Protein interactions for RNA: ENST00000543548.1

NTF3-205, Transcript of neurotrophin 3, humanhuman

TSL 3

Gene NTF3, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3-205ENST00000543548 KIAA1107Q9UPP5 1409 aa25.45■■□□□ 1.66
NTF3-205ENST00000543548 CCDC18Q5T9S5 1454 aa25.44■■□□□ 1.66
NTF3-205ENST00000543548 TNRQ92752 1358 aa25.44■■□□□ 1.66
NTF3-205ENST00000543548 ANKLE2Q86XL3 938 aa25.43■■□□□ 1.66
NTF3-205ENST00000543548 LRRC7Q96NW7 1537 aa25.41■■□□□ 1.66
NTF3-205ENST00000543548 MED14O60244 1454 aa25.4■■□□□ 1.66
NTF3-205ENST00000543548 NPHP4O75161 1426 aaPredicted RBP25.4■■□□□ 1.66
NTF3-205ENST00000543548 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
NTF3-205ENST00000543548 POTEAQ6S8J7 498 aa25.37■■□□□ 1.65
NTF3-205ENST00000543548 CFDP1Q9UEE9 299 aaPredicted RBP25.36■■□□□ 1.65
NTF3-205ENST00000543548 DEPDC5O75140 1603 aa25.36■■□□□ 1.65
NTF3-205ENST00000543548 PZPP20742 1482 aa25.35■■□□□ 1.65
NTF3-205ENST00000543548 THEMISQ8N1K5 641 aaPredicted RBP25.34■■□□□ 1.65
NTF3-205ENST00000543548 ZNF644Q9H582 1327 aaPredicted RBP25.34■■□□□ 1.65
NTF3-205ENST00000543548 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
NTF3-205ENST00000543548 IQGAP1P46940 1657 aa25.32■■□□□ 1.64
NTF3-205ENST00000543548 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
NTF3-205ENST00000543548 DHX29Q7Z478 1369 aaKnown RBP25.31■■□□□ 1.64
NTF3-205ENST00000543548 MIA2Q96PC5 1412 aa25.31■■□□□ 1.64
NTF3-205ENST00000543548 UGGT1Q9NYU2 1555 aa25.31■■□□□ 1.64
NTF3-205ENST00000543548 MBD5Q9P267 1494 aa25.29■■□□□ 1.64
NTF3-205ENST00000543548 KIF3BO15066 747 aa25.28■■□□□ 1.64
NTF3-205ENST00000543548 NLRP1Q9C000 1473 aa25.27■■□□□ 1.64
NTF3-205ENST00000543548 KDM5DQ9BY66 1539 aa25.26■■□□□ 1.63
NTF3-205ENST00000543548 CCNB3Q8WWL7 1395 aa25.25■■□□□ 1.63
NTF3-205ENST00000543548 FAM135AQ9P2D6 1515 aa25.25■■□□□ 1.63
NTF3-205ENST00000543548 SYNMO15061 1565 aa25.25■■□□□ 1.63
NTF3-205ENST00000543548 FYCO1Q9BQS8 1478 aa25.24■■□□□ 1.63
NTF3-205ENST00000543548 XIRP1Q702N8 1843 aaKnown RBP25.23■■□□□ 1.63
NTF3-205ENST00000543548 RTEL1-TNFRSF6BF6WH68 1400 aa25.23■■□□□ 1.63
NTF3-205ENST00000543548 WASHC2CQ9Y4E1 1318 aa25.22■■□□□ 1.63
NTF3-205ENST00000543548 ZC3H13Q5T200 1668 aaKnown RBP25.22■■□□□ 1.63
NTF3-205ENST00000543548 SETD1AO15047 1707 aaKnown RBP25.2■■□□□ 1.63
NTF3-205ENST00000543548 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
NTF3-205ENST00000543548 TIAM1Q13009 1591 aa25.15■■□□□ 1.62
NTF3-205ENST00000543548 FAM135BQ49AJ0 1406 aa25.13■■□□□ 1.61
NTF3-205ENST00000543548 LTKP29376 864 aa25.11■■□□□ 1.61
NTF3-205ENST00000543548 UBR1Q8IWV7 1749 aa25.07■■□□□ 1.6
NTF3-205ENST00000543548 NCOA2Q15596 1464 aa25.07■■□□□ 1.6
NTF3-205ENST00000543548 MTUS2Q5JR59 1369 aa25.06■■□□□ 1.6
NTF3-205ENST00000543548 SCAF11Q99590 1463 aaKnown RBP25.06■■□□□ 1.6
NTF3-205ENST00000543548 ERVK-7P63135 1459 aa25.05■■□□□ 1.6
NTF3-205ENST00000543548 CFAP65Q6ZU64 1925 aaKnown RBP25.04■■□□□ 1.6
NTF3-205ENST00000543548 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
NTF3-205ENST00000543548 ABCC3O15438 1527 aa25.03■■□□□ 1.6
NTF3-205ENST00000543548 ROBO1Q9Y6N7 1651 aa25.03■■□□□ 1.6
NTF3-205ENST00000543548 ARHGAP23Q9P227 1491 aa25.02■■□□□ 1.6
NTF3-205ENST00000543548 TXNDC2Q86VQ3 553 aa25.01■■□□□ 1.59
NTF3-205ENST00000543548 UPF1Q92900 1129 aaKnown RBP eCLIP25.01■■□□□ 1.59
NTF3-205ENST00000543548 SLIT1O75093 1534 aa24.98■■□□□ 1.59
NTF3-205ENST00000543548 TMEM94Q12767 1356 aa24.98■■□□□ 1.59
NTF3-205ENST00000543548 RBM33Q96EV2 1170 aaKnown RBP24.98■■□□□ 1.59
NTF3-205ENST00000543548 CAMSAP2Q08AD1 1489 aa24.96■■□□□ 1.59
NTF3-205ENST00000543548 MAP3K1Q13233 1512 aa24.96■■□□□ 1.59
NTF3-205ENST00000543548 CEP162Q5TB80 1403 aa24.95■■□□□ 1.58
NTF3-205ENST00000543548 MROH1Q8NDA8 1641 aa24.94■■□□□ 1.58
NTF3-205ENST00000543548 EHBP1L1Q8N3D4 1523 aa24.92■■□□□ 1.58
NTF3-205ENST00000543548 RSPH4AQ5TD94 716 aa24.92■■□□□ 1.58
NTF3-205ENST00000543548 CEP152O94986 1710 aa24.91■■□□□ 1.58
NTF3-205ENST00000543548 KCNA6P17658 529 aa24.87■■□□□ 1.57
NTF3-205ENST00000543548 ARHGEF5Q12774 1597 aa24.87■■□□□ 1.57
NTF3-205ENST00000543548 LRP6O75581 1613 aa24.86■■□□□ 1.57
NTF3-205ENST00000543548 PHLPP1O60346 1717 aa24.86■■□□□ 1.57
NTF3-205ENST00000543548 JCADQ9P266 1359 aa24.86■■□□□ 1.57
NTF3-205ENST00000543548 PROSER2Q86WR7 435 aaPredicted RBP24.86■■□□□ 1.57
NTF3-205ENST00000543548 TRIM52Q96A61 297 aa24.85■■□□□ 1.57
NTF3-205ENST00000543548 EID1Q9Y6B2 187 aa24.85■■□□□ 1.57
NTF3-205ENST00000543548 TMEM2Q9UHN6 1383 aa24.84■■□□□ 1.57
NTF3-205ENST00000543548 TSPY4P0CV99 314 aa24.84■■□□□ 1.57
NTF3-205ENST00000543548 TSPY10P0CW01 314 aa24.84■■□□□ 1.57
NTF3-205ENST00000543548 PIK3C2BO00750 1634 aa24.83■■□□□ 1.57
NTF3-205ENST00000543548 TET3O43151 1660 aa24.83■■□□□ 1.57
NTF3-205ENST00000543548 SLC26A8Q96RN1 970 aa24.82■■□□□ 1.56
NTF3-205ENST00000543548 LRRC9Q6ZRR7 1453 aa24.82■■□□□ 1.56
NTF3-205ENST00000543548 PRDM15P57071 1507 aaPredicted RBP24.81■■□□□ 1.56
NTF3-205ENST00000543548 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
NTF3-205ENST00000543548 EIF2AK4Q9P2K8 1649 aaKnown RBP24.81■■□□□ 1.56
NTF3-205ENST00000543548 COL16A1Q07092 1604 aaPredicted RBP24.8■■□□□ 1.56
NTF3-205ENST00000543548 MAST1Q9Y2H9 1570 aa24.78■■□□□ 1.56
NTF3-205ENST00000543548 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
NTF3-205ENST00000543548 SRCAPQ6ZRS2 3230 aa24.76■■□□□ 1.55
NTF3-205ENST00000543548 NWD1Q149M9 1564 aa24.75■■□□□ 1.55
NTF3-205ENST00000543548 ZNF772Q68DY9 489 aaPredicted RBP24.74■■□□□ 1.55
NTF3-205ENST00000543548 MSH6P52701 1360 aa24.73■■□□□ 1.55
NTF3-205ENST00000543548 NKTRP30414 1462 aaKnown RBP24.72■■□□□ 1.55
NTF3-205ENST00000543548 IDI1Q13907 227 aa24.72■■□□□ 1.55
NTF3-205ENST00000543548 SPATA31A6Q5VVP1 1343 aa24.7■■□□□ 1.54
NTF3-205ENST00000543548 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
NTF3-205ENST00000543548 RXRBP28702 533 aa24.68■■□□□ 1.54
NTF3-205ENST00000543548 MEX3CQ5U5Q3 659 aaKnown RBP24.68■■□□□ 1.54
NTF3-205ENST00000543548 STAG3Q9UJ98 1225 aa24.68■■□□□ 1.54
NTF3-205ENST00000543548 FGD6Q6ZV73 1430 aa24.68■■□□□ 1.54
NTF3-205ENST00000543548 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
NTF3-205ENST00000543548 DUOX2Q9NRD8 1548 aa24.65■■□□□ 1.54
NTF3-205ENST00000543548 CDK12Q9NYV4 1490 aaPredicted RBP24.64■■□□□ 1.53
NTF3-205ENST00000543548 SHPRHQ149N8 1683 aa24.63■■□□□ 1.53
NTF3-205ENST00000543548 CHD2O14647 1828 aaKnown RBP24.63■■□□□ 1.53
NTF3-205ENST00000543548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.61■■□□□ 1.53
NTF3-205ENST00000543548 AHDC1Q5TGY3 1603 aaPredicted RBP24.6■■□□□ 1.53
NTF3-205ENST00000543548 DIP2AQ14689 1571 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms