RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 KDM5DQ9BY66 1539 aa29.05■■■□□ 2.24
TMED3-204ENST00000543455 FAM135AQ9P2D6 1515 aa29.05■■■□□ 2.24
TMED3-204ENST00000543455 DAPK1P53355 1430 aa29.04■■■□□ 2.24
TMED3-204ENST00000543455 EIF2AK4Q9P2K8 1649 aaKnown RBP29.03■■■□□ 2.24
TMED3-204ENST00000543455 MYO3AQ8NEV4 1616 aa29.03■■■□□ 2.24
TMED3-204ENST00000543455 ILDR1Q86SU0 546 aaPredicted RBP29.02■■■□□ 2.24
TMED3-204ENST00000543455 MROH1Q8NDA8 1641 aa29.01■■■□□ 2.24
TMED3-204ENST00000543455 DUOX2Q9NRD8 1548 aa29■■■□□ 2.23
TMED3-204ENST00000543455 ZNF142P52746 1687 aaPredicted RBP29■■■□□ 2.23
TMED3-204ENST00000543455 PZPP20742 1482 aa28.96■■■□□ 2.23
TMED3-204ENST00000543455 KIF15Q9NS87 1388 aa28.96■■■□□ 2.23
TMED3-204ENST00000543455 CEP170BQ9Y4F5 1589 aaPredicted RBP28.95■■■□□ 2.22
TMED3-204ENST00000543455 WASHC2CQ9Y4E1 1318 aa28.95■■■□□ 2.22
TMED3-204ENST00000543455 ABCC3O15438 1527 aa28.94■■■□□ 2.22
TMED3-204ENST00000543455 NCOA1Q15788 1441 aa28.94■■■□□ 2.22
TMED3-204ENST00000543455 FBXO31Q5XUX0 539 aaPredicted RBP28.93■■■□□ 2.22
TMED3-204ENST00000543455 CAMSAP1Q5T5Y3 1602 aa28.93■■■□□ 2.22
TMED3-204ENST00000543455 ZC3H13Q5T200 1668 aaKnown RBP28.92■■■□□ 2.22
TMED3-204ENST00000543455 RRP7BPQ9NSQ0 103 aa28.91■■■□□ 2.22
TMED3-204ENST00000543455 CEP152O94986 1710 aa28.9■■■□□ 2.22
TMED3-204ENST00000543455 ERBINQ96RT1 1412 aa28.89■■■□□ 2.22
TMED3-204ENST00000543455 CHIC2Q9UKJ5 165 aa28.88■■■□□ 2.21
TMED3-204ENST00000543455 PRDM15P57071 1507 aaPredicted RBP28.86■■■□□ 2.21
TMED3-204ENST00000543455 A2ML1A8K2U0 1454 aa28.86■■■□□ 2.21
TMED3-204ENST00000543455 PTPRTO14522 1441 aa28.86■■■□□ 2.21
TMED3-204ENST00000543455 TNRQ92752 1358 aa28.86■■■□□ 2.21
TMED3-204ENST00000543455 ADGRL2O95490 1459 aa28.86■■■□□ 2.21
TMED3-204ENST00000543455 DEPDC5O75140 1603 aa28.85■■■□□ 2.21
TMED3-204ENST00000543455 FAM50AQ14320 339 aaKnown RBP28.85■■■□□ 2.21
TMED3-204ENST00000543455 ANKRD30AQ9BXX3 1397 aa28.83■■■□□ 2.21
TMED3-204ENST00000543455 DMRT2Q9Y5R5 561 aa28.83■■■□□ 2.21
TMED3-204ENST00000543455 PLA2R1Q13018 1463 aa28.83■■■□□ 2.21
TMED3-204ENST00000543455 SPATA31D1Q6ZQQ2 1576 aa28.8■■■□□ 2.2
TMED3-204ENST00000543455 PPARGC1BQ86YN6 1023 aaKnown RBP28.79■■■□□ 2.2
TMED3-204ENST00000543455 NCKAP5LQ9HCH0 1330 aa28.79■■■□□ 2.2
TMED3-204ENST00000543455 CFAP65Q6ZU64 1925 aaKnown RBP28.77■■■□□ 2.2
TMED3-204ENST00000543455 FBXO41Q8TF61 875 aa28.77■■■□□ 2.2
TMED3-204ENST00000543455 ERVK-7P63135 1459 aa28.77■■■□□ 2.2
TMED3-204ENST00000543455 VWDEQ8N2E2 1590 aa28.75■■■□□ 2.19
TMED3-204ENST00000543455 NLRP1Q9C000 1473 aa28.74■■■□□ 2.19
TMED3-204ENST00000543455 CERKQ8TCT0 537 aa28.73■■■□□ 2.19
TMED3-204ENST00000543455 ARHGAP31Q2M1Z3 1444 aa28.72■■■□□ 2.19
TMED3-204ENST00000543455 LTBP4Q8N2S1 1624 aa28.71■■■□□ 2.19
TMED3-204ENST00000543455 PKD2Q13563 968 aa28.7■■■□□ 2.18
TMED3-204ENST00000543455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.7■■■□□ 2.183e-6■■■□□ 16.2
TMED3-204ENST00000543455 LMTK2Q8IWU2 1503 aa28.69■■■□□ 2.18
TMED3-204ENST00000543455 NEURL4Q96JN8 1562 aa28.68■■■□□ 2.18
TMED3-204ENST00000543455 UGGT1Q9NYU2 1555 aa28.68■■■□□ 2.18
TMED3-204ENST00000543455 POLR1AO95602 1720 aaPredicted RBP28.68■■■□□ 2.18
TMED3-204ENST00000543455 ANKRD50Q9ULJ7 1429 aa28.66■■■□□ 2.18
TMED3-204ENST00000543455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.64■■■□□ 2.18
TMED3-204ENST00000543455 KANK1Q14678 1352 aa28.63■■■□□ 2.17
TMED3-204ENST00000543455 ROCK1Q13464 1354 aa28.62■■■□□ 2.17
TMED3-204ENST00000543455 UBR1Q8IWV7 1749 aa28.61■■■□□ 2.17
TMED3-204ENST00000543455 EFCAB6Q5THR3 1501 aa28.6■■■□□ 2.17
TMED3-204ENST00000543455 THEMISQ8N1K5 641 aaPredicted RBP28.59■■■□□ 2.17
TMED3-204ENST00000543455 ZNF335Q9H4Z2 1342 aaPredicted RBP28.58■■■□□ 2.17
TMED3-204ENST00000543455 UNC13BO14795 1591 aa28.57■■■□□ 2.16
TMED3-204ENST00000543455 RRBP1Q9P2E9 1410 aaKnown RBP28.56■■■□□ 2.16
TMED3-204ENST00000543455 SYNMO15061 1565 aa28.55■■■□□ 2.16
TMED3-204ENST00000543455 MED14O60244 1454 aa28.54■■■□□ 2.16
TMED3-204ENST00000543455 ITGAEP38570 1179 aa28.53■■■□□ 2.16
TMED3-204ENST00000543455 PIK3C2BO00750 1634 aa28.53■■■□□ 2.16
TMED3-204ENST00000543455 ANKLE2Q86XL3 938 aa28.53■■■□□ 2.16
TMED3-204ENST00000543455 NOS1P29475 1434 aa28.52■■■□□ 2.16
TMED3-204ENST00000543455 TET3O43151 1660 aa28.51■■■□□ 2.15
TMED3-204ENST00000543455 ARHGAP23Q9P227 1491 aa28.49■■■□□ 2.15
TMED3-204ENST00000543455 NPHP4O75161 1426 aaPredicted RBP28.48■■■□□ 2.15
TMED3-204ENST00000543455 IQGAP1P46940 1657 aa28.48■■■□□ 2.15
TMED3-204ENST00000543455 IQSEC2Q5JU85 1478 aa28.48■■■□□ 2.15
TMED3-204ENST00000543455 GCC2Q8IWJ2 1684 aa28.47■■■□□ 2.15
TMED3-204ENST00000543455 SLIT1O75093 1534 aa28.47■■■□□ 2.15
TMED3-204ENST00000543455 RPRD2Q5VT52 1461 aaKnown RBP28.45■■■□□ 2.15
TMED3-204ENST00000543455 IQGAP3Q86VI3 1631 aa28.44■■■□□ 2.14
TMED3-204ENST00000543455 KDM5AP29375 1690 aaKnown RBP28.44■■■□□ 2.14
TMED3-204ENST00000543455 IDI1Q13907 227 aa28.44■■■□□ 2.14
TMED3-204ENST00000543455 E9PCH4 1651 aa28.42■■■□□ 2.14
TMED3-204ENST00000543455 SCAF11Q99590 1463 aaKnown RBP28.41■■■□□ 2.14
TMED3-204ENST00000543455 LTKP29376 864 aa28.4■■■□□ 2.14
TMED3-204ENST00000543455 ADGRB3O60242 1522 aa28.38■■■□□ 2.13
TMED3-204ENST00000543455 STRCP1A6NGW2 1772 aa28.38■■■□□ 2.13
TMED3-204ENST00000543455 TMEM2Q9UHN6 1383 aa28.37■■■□□ 2.13
TMED3-204ENST00000543455 NUP155O75694 1391 aa28.34■■■□□ 2.13
TMED3-204ENST00000543455 MYO5BQ9ULV0 1848 aa28.34■■■□□ 2.13
TMED3-204ENST00000543455 CPS1P31327 1500 aa28.34■■■□□ 2.13
TMED3-204ENST00000543455 TXNDC2Q86VQ3 553 aa28.34■■■□□ 2.13
TMED3-204ENST00000543455 NAIPQ13075 1403 aa28.33■■■□□ 2.13
TMED3-204ENST00000543455 SLC52A1Q9NWF4 448 aa28.33■■■□□ 2.13
TMED3-204ENST00000543455 STAG3Q9UJ98 1225 aa28.3■■■□□ 2.12
TMED3-204ENST00000543455 TMEM131LA2VDJ0 1609 aa28.29■■■□□ 2.12
TMED3-204ENST00000543455 EID1Q9Y6B2 187 aa28.26■■■□□ 2.11
TMED3-204ENST00000543455 HFM1A2PYH4 1435 aa28.24■■■□□ 2.11
TMED3-204ENST00000543455 ZFYVE9O95405 1425 aa28.24■■■□□ 2.11
TMED3-204ENST00000543455 LRRC7Q96NW7 1537 aa28.21■■■□□ 2.11
TMED3-204ENST00000543455 UBAP1LF5GYI3 381 aa28.21■■■□□ 2.11
TMED3-204ENST00000543455 SPHKAPQ2M3C7 1700 aa28.2■■■□□ 2.1
TMED3-204ENST00000543455 ALKQ9UM73 1620 aa28.19■■■□□ 2.1
TMED3-204ENST00000543455 RIMS2Q9UQ26 1411 aa28.17■■■□□ 2.1
TMED3-204ENST00000543455 XIRP1Q702N8 1843 aaKnown RBP28.15■■■□□ 2.1
TMED3-204ENST00000543455 SLC26A8Q96RN1 970 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms