RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	EFCAB6	Q5THR3	1501 aa		11.07	□□□□□ -0.64
GTF2H3-212	ENST00000543341	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.07	□□□□□ -0.64
GTF2H3-212	ENST00000543341	SPHKAP	Q2M3C7	1700 aa		11.07	□□□□□ -0.64
GTF2H3-212	ENST00000543341	YEATS2	Q9ULM3	1422 aa		11.06	□□□□□ -0.64
GTF2H3-212	ENST00000543341	IFT172	Q9UG01	1749 aa		11.06	□□□□□ -0.64
GTF2H3-212	ENST00000543341	ACIN1	Q9UKV3	1341 aa	Known RBP	11.06	□□□□□ -0.64
GTF2H3-212	ENST00000543341	DHX29	Q7Z478	1369 aa	Known RBP	11.06	□□□□□ -0.64
GTF2H3-212	ENST00000543341	ANKRD30A	Q9BXX3	1397 aa		11.06	□□□□□ -0.64
GTF2H3-212	ENST00000543341	ABCC3	O15438	1527 aa		11.05	□□□□□ -0.64
GTF2H3-212	ENST00000543341	KCNH8	Q96L42	1107 aa		11.05	□□□□□ -0.64
GTF2H3-212	ENST00000543341	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.04	□□□□□ -0.64
GTF2H3-212	ENST00000543341	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.04	□□□□□ -0.64
GTF2H3-212	ENST00000543341	KIF15	Q9NS87	1388 aa		11.03	□□□□□ -0.64
GTF2H3-212	ENST00000543341	ANKRD50	Q9ULJ7	1429 aa		11.03	□□□□□ -0.64
GTF2H3-212	ENST00000543341	PREX1	Q8TCU6	1659 aa		11.03	□□□□□ -0.64
GTF2H3-212	ENST00000543341	FER1L4	A9Z1Z3	1794 aa		11.03	□□□□□ -0.64
GTF2H3-212	ENST00000543341	ARHGAP31	Q2M1Z3	1444 aa		11.02	□□□□□ -0.64
GTF2H3-212	ENST00000543341	SCAF1	Q9H7N4	1312 aa	Known RBP	11.02	□□□□□ -0.65
GTF2H3-212	ENST00000543341	RPRD2	Q5VT52	1461 aa	Known RBP	11.02	□□□□□ -0.65
GTF2H3-212	ENST00000543341	RAB3GAP2	Q9H2M9	1393 aa		11.02	□□□□□ -0.65
GTF2H3-212	ENST00000543341	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.02	□□□□□ -0.65
GTF2H3-212	ENST00000543341	CLTC	Q00610	1675 aa	Known RBP	11.01	□□□□□ -0.65
GTF2H3-212	ENST00000543341	ZNF142	P52746	1687 aa	Predicted RBP	11.01	□□□□□ -0.65
GTF2H3-212	ENST00000543341	TRPM2	O94759	1503 aa		11.01	□□□□□ -0.65
GTF2H3-212	ENST00000543341	SPATA31D1	Q6ZQQ2	1576 aa		11.01	□□□□□ -0.65
GTF2H3-212	ENST00000543341	C3	P01024	1663 aa		11	□□□□□ -0.65
GTF2H3-212	ENST00000543341	PTPRT	O14522	1441 aa		11	□□□□□ -0.65
GTF2H3-212	ENST00000543341	CCER1	Q8TC90	406 aa	Predicted RBP	10.99	□□□□□ -0.65
GTF2H3-212	ENST00000543341	SYNM	O15061	1565 aa		10.99	□□□□□ -0.65
GTF2H3-212	ENST00000543341	DHX57	Q6P158	1386 aa	Known RBP	10.97	□□□□□ -0.65
GTF2H3-212	ENST00000543341	AFAP1	Q8N556	730 aa		10.97	□□□□□ -0.65
GTF2H3-212	ENST00000543341	MYT1	Q01538	1121 aa		10.97	□□□□□ -0.65
GTF2H3-212	ENST00000543341	SPAG9	O60271	1321 aa	Known RBP	10.97	□□□□□ -0.65
GTF2H3-212	ENST00000543341	PLA2R1	Q13018	1463 aa		10.95	□□□□□ -0.66
GTF2H3-212	ENST00000543341	CENPB	P07199	599 aa	Predicted RBP	10.95	□□□□□ -0.66
GTF2H3-212	ENST00000543341	CLTCL1	P53675	1640 aa		10.95	□□□□□ -0.66
GTF2H3-212	ENST00000543341	NOS1	P29475	1434 aa		10.94	□□□□□ -0.66
GTF2H3-212	ENST00000543341	MADD	Q8WXG6	1647 aa		10.94	□□□□□ -0.66
GTF2H3-212	ENST00000543341	CLSPN	Q9HAW4	1339 aa		10.93	□□□□□ -0.66
GTF2H3-212	ENST00000543341	RAPGEF3	O95398	923 aa		10.92	□□□□□ -0.66
GTF2H3-212	ENST00000543341	PPP6R1	Q9UPN7	881 aa		10.92	□□□□□ -0.66
GTF2H3-212	ENST00000543341	PPL	O60437	1756 aa		10.92	□□□□□ -0.66
GTF2H3-212	ENST00000543341	ADGRB3	O60242	1522 aa		10.92	□□□□□ -0.66
GTF2H3-212	ENST00000543341	FAM50A	Q14320	339 aa	Known RBP	10.92	□□□□□ -0.66
GTF2H3-212	ENST00000543341	TMEM131L	A2VDJ0	1609 aa		10.92	□□□□□ -0.66
GTF2H3-212	ENST00000543341	MYO3A	Q8NEV4	1616 aa		10.91	□□□□□ -0.66
GTF2H3-212	ENST00000543341	SETD1A	O15047	1707 aa	Known RBP	10.91	□□□□□ -0.66
GTF2H3-212	ENST00000543341	UBR1	Q8IWV7	1749 aa		10.91	□□□□□ -0.66
GTF2H3-212	ENST00000543341	KIF1B	O60333	1816 aa		10.91	□□□□□ -0.66
GTF2H3-212	ENST00000543341	KIAA1210	Q9ULL0	1709 aa		10.9	□□□□□ -0.66
GTF2H3-212	ENST00000543341	MYO5B	Q9ULV0	1848 aa		10.9	□□□□□ -0.66
GTF2H3-212	ENST00000543341	TSPY4	P0CV99	314 aa		10.9	□□□□□ -0.66
GTF2H3-212	ENST00000543341	TSPY10	P0CW01	314 aa		10.9	□□□□□ -0.66
GTF2H3-212	ENST00000543341	CNTLN	Q9NXG0	1405 aa		10.89	□□□□□ -0.67
GTF2H3-212	ENST00000543341	LAMC1	P11047	1609 aa		10.89	□□□□□ -0.67
GTF2H3-212	ENST00000543341	ANKRD30B	Q9BXX2	1392 aa		10.89	□□□□□ -0.67
GTF2H3-212	ENST00000543341	RIMS1	Q86UR5	1692 aa	Known RBP	10.89	□□□□□ -0.67
GTF2H3-212	ENST00000543341	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.89	□□□□□ -0.67
GTF2H3-212	ENST00000543341	NPAT	Q14207	1427 aa		10.88	□□□□□ -0.67
GTF2H3-212	ENST00000543341	ERVK-7	P63135	1459 aa		10.88	□□□□□ -0.67
GTF2H3-212	ENST00000543341	NRXN1	Q9ULB1	1477 aa		10.88	□□□□□ -0.67
GTF2H3-212	ENST00000543341	SPATA31E1	Q6ZUB1	1445 aa		10.86	□□□□□ -0.67
GTF2H3-212	ENST00000543341	UGGT1	Q9NYU2	1555 aa		10.86	□□□□□ -0.67
GTF2H3-212	ENST00000543341	GTF3C3	Q9Y5Q9	886 aa		10.85	□□□□□ -0.67
GTF2H3-212	ENST00000543341	PLPPR3	Q6T4P5	718 aa		10.84	□□□□□ -0.67
GTF2H3-212	ENST00000543341	RRP7BP	Q9NSQ0	103 aa		10.84	□□□□□ -0.67
GTF2H3-212	ENST00000543341	NEXMIF	Q5QGS0	1516 aa		10.83	□□□□□ -0.68
GTF2H3-212	ENST00000543341	NRXN3	Q9Y4C0	1643 aa		10.83	□□□□□ -0.68
GTF2H3-212	ENST00000543341	TRPM1	Q7Z4N2	1603 aa		10.83	□□□□□ -0.68
GTF2H3-212	ENST00000543341	MYOM2	P54296	1465 aa		10.82	□□□□□ -0.68
GTF2H3-212	ENST00000543341	NEUROD1	Q13562	356 aa		10.81	□□□□□ -0.68
GTF2H3-212	ENST00000543341	CHIC2	Q9UKJ5	165 aa		10.81	□□□□□ -0.68
GTF2H3-212	ENST00000543341	SLIT1	O75093	1534 aa		10.81	□□□□□ -0.68
GTF2H3-212	ENST00000543341	UHRF1BP1	Q6BDS2	1440 aa		10.8	□□□□□ -0.68
GTF2H3-212	ENST00000543341	POLR1A	O95602	1720 aa	Predicted RBP	10.8	□□□□□ -0.68
GTF2H3-212	ENST00000543341	DIEXF	Q68CQ4	756 aa	Known RBP	10.79	□□□□□ -0.68
GTF2H3-212	ENST00000543341	ARHGAP23	Q9P227	1491 aa		10.79	□□□□□ -0.68
GTF2H3-212	ENST00000543341	MPHOSPH9	Q99550	1183 aa		10.79	□□□□□ -0.68
GTF2H3-212	ENST00000543341	NUP155	O75694	1391 aa		10.79	□□□□□ -0.68
GTF2H3-212	ENST00000543341	KNDC1	Q76NI1	1749 aa		10.79	□□□□□ -0.68
GTF2H3-212	ENST00000543341	NLRP1	Q9C000	1473 aa		10.79	□□□□□ -0.68
GTF2H3-212	ENST00000543341	IQGAP1	P46940	1657 aa		10.78	□□□□□ -0.68
GTF2H3-212	ENST00000543341	YTHDC1	Q96MU7	727 aa	Known RBP	10.78	□□□□□ -0.68
GTF2H3-212	ENST00000543341	ZFYVE9	O95405	1425 aa		10.78	□□□□□ -0.68
GTF2H3-212	ENST00000543341	PRAG1	Q86YV5	1406 aa		10.78	□□□□□ -0.68
GTF2H3-212	ENST00000543341	SETBP1	Q9Y6X0	1596 aa		10.77	□□□□□ -0.68
GTF2H3-212	ENST00000543341	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.77	□□□□□ -0.69
GTF2H3-212	ENST00000543341	KANK1	Q14678	1352 aa		10.77	□□□□□ -0.69
GTF2H3-212	ENST00000543341	TRH	P20396	242 aa	Predicted RBP	10.76	□□□□□ -0.69
GTF2H3-212	ENST00000543341	PTPRM	P28827	1452 aa		10.76	□□□□□ -0.69
GTF2H3-212	ENST00000543341	A2ML1	A8K2U0	1454 aa		10.74	□□□□□ -0.69
GTF2H3-212	ENST00000543341	TIMELESS	Q9UNS1	1208 aa		10.74	□□□□□ -0.69
GTF2H3-212	ENST00000543341	ZMYM3	Q14202	1370 aa		10.73	□□□□□ -0.69
GTF2H3-212	ENST00000543341	DIP2A	Q14689	1571 aa		10.73	□□□□□ -0.69
GTF2H3-212	ENST00000543341	KIF3B	O15066	747 aa		10.73	□□□□□ -0.69
GTF2H3-212	ENST00000543341	MED14	O60244	1454 aa		10.72	□□□□□ -0.69
GTF2H3-212	ENST00000543341	SETD1B	Q9UPS6	1966 aa	Known RBP	10.72	□□□□□ -0.69
GTF2H3-212	ENST00000543341	ITGAE	P38570	1179 aa		10.72	□□□□□ -0.69
GTF2H3-212	ENST00000543341	STRC	Q7RTU9	1775 aa		10.72	□□□□□ -0.69
GTF2H3-212	ENST00000543341	ADGRB1	O14514	1584 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms