RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 ANKRD30AQ9BXX3 1397 aa25.03■■□□□ 1.6
CIT-212ENST00000543239 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
CIT-212ENST00000543239 ADGRL2O95490 1459 aa25.02■■□□□ 1.6
CIT-212ENST00000543239 KDM5DQ9BY66 1539 aa25.02■■□□□ 1.6
CIT-212ENST00000543239 NPATQ14207 1427 aa25.01■■□□□ 1.59
CIT-212ENST00000543239 ERBINQ96RT1 1412 aa25.01■■□□□ 1.59
CIT-212ENST00000543239 NCOA1Q15788 1441 aa24.99■■□□□ 1.59
CIT-212ENST00000543239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.99■■□□□ 1.59
CIT-212ENST00000543239 SETD1BQ9UPS6 1966 aaKnown RBP24.99■■□□□ 1.59
CIT-212ENST00000543239 UHRF1BP1Q6BDS2 1440 aa24.98■■□□□ 1.59
CIT-212ENST00000543239 RRP7BPQ9NSQ0 103 aa24.98■■□□□ 1.59
CIT-212ENST00000543239 CHIC2Q9UKJ5 165 aa24.97■■□□□ 1.59
CIT-212ENST00000543239 ZC3H13Q5T200 1668 aaKnown RBP24.94■■□□□ 1.58
CIT-212ENST00000543239 MROH1Q8NDA8 1641 aa24.94■■□□□ 1.58
CIT-212ENST00000543239 WASHC2CQ9Y4E1 1318 aa24.94■■□□□ 1.58
CIT-212ENST00000543239 PTPRKQ15262 1439 aa24.94■■□□□ 1.58
CIT-212ENST00000543239 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
CIT-212ENST00000543239 RRBP1Q9P2E9 1410 aaKnown RBP24.91■■□□□ 1.58
CIT-212ENST00000543239 PZPP20742 1482 aa24.9■■□□□ 1.58
CIT-212ENST00000543239 ABCC3O15438 1527 aa24.9■■□□□ 1.58
CIT-212ENST00000543239 DEPDC5O75140 1603 aa24.9■■□□□ 1.58
CIT-212ENST00000543239 HSPA2P54652 639 aa24.89■■□□□ 1.58
CIT-212ENST00000543239 ROCK1Q13464 1354 aa24.88■■□□□ 1.57
CIT-212ENST00000543239 MYO3AQ8NEV4 1616 aa24.85■■□□□ 1.57
CIT-212ENST00000543239 ANKRD50Q9ULJ7 1429 aa24.84■■□□□ 1.57
CIT-212ENST00000543239 CEP152O94986 1710 aa24.83■■□□□ 1.57
CIT-212ENST00000543239 ZNF142P52746 1687 aaPredicted RBP24.82■■□□□ 1.56
CIT-212ENST00000543239 CAMSAP1Q5T5Y3 1602 aa24.82■■□□□ 1.56
CIT-212ENST00000543239 KANK1Q14678 1352 aa24.81■■□□□ 1.56
CIT-212ENST00000543239 VWDEQ8N2E2 1590 aa24.8■■□□□ 1.56
CIT-212ENST00000543239 TNRQ92752 1358 aa24.8■■□□□ 1.56
CIT-212ENST00000543239 FBXO31Q5XUX0 539 aaPredicted RBP24.79■■□□□ 1.56
CIT-212ENST00000543239 CEP170BQ9Y4F5 1589 aaPredicted RBP24.79■■□□□ 1.56
CIT-212ENST00000543239 ITGAEP38570 1179 aa24.78■■□□□ 1.56
CIT-212ENST00000543239 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
CIT-212ENST00000543239 LMTK2Q8IWU2 1503 aa24.77■■□□□ 1.56
CIT-212ENST00000543239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.77■■□□□ 1.56
CIT-212ENST00000543239 SPATA31D1Q6ZQQ2 1576 aa24.76■■□□□ 1.55
CIT-212ENST00000543239 A2ML1A8K2U0 1454 aa24.76■■□□□ 1.55
CIT-212ENST00000543239 ERVK-7P63135 1459 aa24.74■■□□□ 1.55
CIT-212ENST00000543239 NLRP1Q9C000 1473 aa24.73■■□□□ 1.55
CIT-212ENST00000543239 STRCQ7RTU9 1775 aa24.72■■□□□ 1.55
CIT-212ENST00000543239 UNC13BO14795 1591 aa24.72■■□□□ 1.55
CIT-212ENST00000543239 PLA2R1Q13018 1463 aa24.7■■□□□ 1.55
CIT-212ENST00000543239 EFCAB6Q5THR3 1501 aa24.68■■□□□ 1.54
CIT-212ENST00000543239 DMRT2Q9Y5R5 561 aa24.68■■□□□ 1.54
CIT-212ENST00000543239 PTPRTO14522 1441 aa24.64■■□□□ 1.54
CIT-212ENST00000543239 UGGT1Q9NYU2 1555 aa24.63■■□□□ 1.53
CIT-212ENST00000543239 TET3O43151 1660 aa24.63■■□□□ 1.53
CIT-212ENST00000543239 RPRD2Q5VT52 1461 aaKnown RBP24.63■■□□□ 1.53
CIT-212ENST00000543239 GCC2Q8IWJ2 1684 aa24.62■■□□□ 1.53
CIT-212ENST00000543239 IQGAP3Q86VI3 1631 aa24.61■■□□□ 1.53
CIT-212ENST00000543239 NAIPQ13075 1403 aa24.61■■□□□ 1.53
CIT-212ENST00000543239 PKD2Q13563 968 aa24.6■■□□□ 1.53
CIT-212ENST00000543239 CFAP65Q6ZU64 1925 aaKnown RBP24.6■■□□□ 1.53
CIT-212ENST00000543239 HFM1A2PYH4 1435 aa24.6■■□□□ 1.53
CIT-212ENST00000543239 THEMISQ8N1K5 641 aaPredicted RBP24.59■■□□□ 1.53
CIT-212ENST00000543239 NOS1P29475 1434 aa24.59■■□□□ 1.53
CIT-212ENST00000543239 NUP155O75694 1391 aa24.56■■□□□ 1.52
CIT-212ENST00000543239 NCKAP5LQ9HCH0 1330 aa24.55■■□□□ 1.52
CIT-212ENST00000543239 SYNMO15061 1565 aa24.54■■□□□ 1.52
CIT-212ENST00000543239 UBR1Q8IWV7 1749 aa24.54■■□□□ 1.52
CIT-212ENST00000543239 POLR1AO95602 1720 aaPredicted RBP24.53■■□□□ 1.52
CIT-212ENST00000543239 PIK3C2BO00750 1634 aa24.51■■□□□ 1.51
CIT-212ENST00000543239 E9PCH4 1651 aa24.51■■□□□ 1.51
CIT-212ENST00000543239 KDM5AP29375 1690 aaKnown RBP24.51■■□□□ 1.51
CIT-212ENST00000543239 NEURL4Q96JN8 1562 aa24.5■■□□□ 1.51
CIT-212ENST00000543239 ANKLE2Q86XL3 938 aa24.49■■□□□ 1.51
CIT-212ENST00000543239 SLC52A1Q9NWF4 448 aa24.49■■□□□ 1.51
CIT-212ENST00000543239 IDI1Q13907 227 aa24.47■■□□□ 1.51
CIT-212ENST00000543239 SLIT1O75093 1534 aa24.46■■□□□ 1.51
CIT-212ENST00000543239 MED14O60244 1454 aa24.46■■□□□ 1.51
CIT-212ENST00000543239 ARHGAP23Q9P227 1491 aa24.45■■□□□ 1.51
CIT-212ENST00000543239 ADGRB3O60242 1522 aa24.44■■□□□ 1.5
CIT-212ENST00000543239 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
CIT-212ENST00000543239 NPHP4O75161 1426 aaPredicted RBP24.42■■□□□ 1.5
CIT-212ENST00000543239 SCAF11Q99590 1463 aaKnown RBP24.4■■□□□ 1.5
CIT-212ENST00000543239 TMEM2Q9UHN6 1383 aa24.4■■□□□ 1.5
CIT-212ENST00000543239 LTBP4Q8N2S1 1624 aa24.39■■□□□ 1.5
CIT-212ENST00000543239 CERKQ8TCT0 537 aa24.39■■□□□ 1.49
CIT-212ENST00000543239 IQGAP1P46940 1657 aa24.38■■□□□ 1.49
CIT-212ENST00000543239 TRIM52Q96A61 297 aa24.37■■□□□ 1.49
CIT-212ENST00000543239 SPHKAPQ2M3C7 1700 aa24.36■■□□□ 1.49
CIT-212ENST00000543239 EID1Q9Y6B2 187 aa24.36■■□□□ 1.49
CIT-212ENST00000543239 TXNDC2Q86VQ3 553 aa24.35■■□□□ 1.49
CIT-212ENST00000543239 TMEM131LA2VDJ0 1609 aa24.35■■□□□ 1.49
CIT-212ENST00000543239 LTKP29376 864 aa24.34■■□□□ 1.49
CIT-212ENST00000543239 ZNF335Q9H4Z2 1342 aaPredicted RBP24.34■■□□□ 1.49
CIT-212ENST00000543239 ACIN1Q9UKV3 1341 aaKnown RBP24.34■■□□□ 1.49
CIT-212ENST00000543239 FBXO41Q8TF61 875 aa24.32■■□□□ 1.48
CIT-212ENST00000543239 SETD5Q9C0A6 1442 aa24.31■■□□□ 1.48
CIT-212ENST00000543239 ILDR1Q86SU0 546 aaPredicted RBP24.3■■□□□ 1.48
CIT-212ENST00000543239 SLC4A1APQ9BWU0 796 aaKnown RBP24.3■■□□□ 1.48
CIT-212ENST00000543239 IQSEC2Q5JU85 1478 aa24.3■■□□□ 1.48
CIT-212ENST00000543239 TRPM2O94759 1503 aa24.3■■□□□ 1.48
CIT-212ENST00000543239 MYO5BQ9ULV0 1848 aa24.28■■□□□ 1.48
CIT-212ENST00000543239 ZFYVE9O95405 1425 aa24.28■■□□□ 1.48
CIT-212ENST00000543239 CPS1P31327 1500 aa24.25■■□□□ 1.47
CIT-212ENST00000543239 CHGAP10645 457 aaKnown RBP24.25■■□□□ 1.47
CIT-212ENST00000543239 HDGFP51858 240 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms