RNA–Protein interactions for RNA: ENST00000542984.1

CACNA1C-IT1-201, CACNA1C intronic transcript 1, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT1, Length 687 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT1-201ENST00000542984 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 MLH3Q9UHC1 1453 aa9.52□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 PIP4K2BP78356 416 aa9.51□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 PTPRKQ15262 1439 aa9.5□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 CDK13Q14004 1512 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 ABCA6Q8N139 1617 aa9.49□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 ZMYM3Q14202 1370 aa9.48□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 CEP170BQ9Y4F5 1589 aaPredicted RBP9.47□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 MYO3AQ8NEV4 1616 aa9.47□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 RTN4Q9NQC3 1192 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 MYT1LQ9UL68 1186 aa9.47□□□□□ -0.89
CACNA1C-IT1-201ENST00000542984 PRKAR2AP13861 404 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 RANGAP1P46060 587 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 RGS17Q9UGC6 210 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 SHANK2Q9UPX8 1470 aa9.46□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 HAX1O00165 279 aa9.45□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 EVX2Q03828 476 aa9.45□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 AMER1Q5JTC6 1135 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 POLR1AO95602 1720 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 ALKQ9UM73 1620 aa9.44□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 KIDINS220Q9ULH0 1771 aa9.44□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 KIF14Q15058 1648 aa9.43□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 ARHGAP5Q13017 1502 aa9.43□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 CDK11AQ9UQ88 783 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 CDC42BPBQ9Y5S2 1711 aa9.42□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 CLTCQ00610 1675 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 DNMT1P26358 1616 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 A2ML1A8K2U0 1454 aa9.4□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 ITSN2Q9NZM3 1697 aa9.4□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 VWDEQ8N2E2 1590 aa9.4□□□□□ -0.9
CACNA1C-IT1-201ENST00000542984 LRRIQ1Q96JM4 1722 aa9.39□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 NEURL4Q96JN8 1562 aa9.39□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 ABCC1P33527 1531 aa9.39□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 TROQ12816 1431 aaPredicted RBP9.38□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 POTEAQ6S8J7 498 aa9.37□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 CLIP1P30622 1438 aa9.37□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 MED14O60244 1454 aa9.36□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 DEPDC5O75140 1603 aa9.36□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 PREX2Q70Z35 1606 aa9.36□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 ANKLE2Q86XL3 938 aa9.36□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 SYNMO15061 1565 aa9.35□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 ARHGAP35Q9NRY4 1499 aa9.34□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 PLXNC1O60486 1568 aa9.34□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 SAMD9LQ8IVG5 1584 aa9.34□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 C19orf67A6NJJ6 358 aa9.34□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 THEMISQ8N1K5 641 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 LRRC7Q96NW7 1537 aa9.34□□□□□ -0.91
CACNA1C-IT1-201ENST00000542984 STRCP1A6NGW2 1772 aa9.33□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 FMN1Q68DA7 1419 aa9.32□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 SETD1AO15047 1707 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 IQGAP1P46940 1657 aa9.32□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 SPAG9O60271 1321 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 FAM135BQ49AJ0 1406 aa9.31□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 UPF1Q92900 1129 aaKnown RBP eCLIP9.31□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 A2MP01023 1474 aa9.31□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 CDC42BPAQ5VT25 1732 aa9.31□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 TNRQ92752 1358 aa9.3□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 GGT6Q6P531 493 aa9.3□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 ATP7AQ04656 1500 aa9.3□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 ADGBQ8N7X0 1667 aa9.29□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 NLRP1Q9C000 1473 aa9.29□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 SRCAPQ6ZRS2 3230 aa9.29□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 SPDYE4A6NLX3 237 aa9.29□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 FAM135AQ9P2D6 1515 aa9.29□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 EEA1Q15075 1411 aa9.29□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 INO80Q9ULG1 1556 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.28□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 XIRP1Q702N8 1843 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-IT1-201ENST00000542984 KIAA1107Q9UPP5 1409 aa9.27□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 UGGT1Q9NYU2 1555 aa9.27□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 PZPP20742 1482 aa9.27□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 PLEKHH2Q8IVE3 1493 aa9.26□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 MIA2Q96PC5 1412 aa9.25□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 ZC3H13Q5T200 1668 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 SYCP2Q9BX26 1530 aa9.25□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 KDM5DQ9BY66 1539 aa9.25□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 FBXO31Q5XUX0 539 aaPredicted RBP9.24□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 HNRNPMP52272 730 aaKnown RBP eCLIP9.23□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 ZNF772Q68DY9 489 aaPredicted RBP9.23□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 FARP1Q9Y4F1 1045 aaPredicted RBP9.23□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 CCDC18Q5T9S5 1454 aa9.22□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 GPATCH8Q9UKJ3 1502 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 ROBO1Q9Y6N7 1651 aa9.22□□□□□ -0.93
CACNA1C-IT1-201ENST00000542984 SLC24A1O60721 1099 aa9.21□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 STAG3Q9UJ98 1225 aa9.21□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 ZNF777Q9ULD5 760 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 JCADQ9P266 1359 aa9.21□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 RTEL1-TNFRSF6BF6WH68 1400 aa9.21□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 CREBZFQ9NS37 354 aa9.2□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 DHX29Q7Z478 1369 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-IT1-201ENST00000542984 CASKIN1Q8WXD9 1431 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms