RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 RGS17Q9UGC6 210 aaPredicted RBP15.52■□□□□ 0.08
C2CD3-219ENST00000542930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.51■□□□□ 0.07
C2CD3-219ENST00000542930 FBXO31Q5XUX0 539 aaPredicted RBP15.51■□□□□ 0.07
C2CD3-219ENST00000542930 THEMISQ8N1K5 641 aaPredicted RBP15.51■□□□□ 0.07
C2CD3-219ENST00000542930 CFDP1Q9UEE9 299 aaPredicted RBP15.51■□□□□ 0.07
C2CD3-219ENST00000542930 MED14O60244 1454 aa15.51■□□□□ 0.07
C2CD3-219ENST00000542930 NPHP4O75161 1426 aaPredicted RBP15.5■□□□□ 0.07
C2CD3-219ENST00000542930 ADGBQ8N7X0 1667 aa15.49■□□□□ 0.07
C2CD3-219ENST00000542930 SENP3Q9H4L4 574 aaPredicted RBP15.49■□□□□ 0.07
C2CD3-219ENST00000542930 PZPP20742 1482 aa15.47■□□□□ 0.07
C2CD3-219ENST00000542930 DEPDC5O75140 1603 aa15.47■□□□□ 0.07
C2CD3-219ENST00000542930 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
C2CD3-219ENST00000542930 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.07
C2CD3-219ENST00000542930 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.07
C2CD3-219ENST00000542930 NLRP1Q9C000 1473 aa15.46■□□□□ 0.06
C2CD3-219ENST00000542930 MIA2Q96PC5 1412 aa15.45■□□□□ 0.06
C2CD3-219ENST00000542930 FAM135AQ9P2D6 1515 aa15.45■□□□□ 0.06
C2CD3-219ENST00000542930 RNF17Q9BXT8 1623 aaKnown RBP15.45■□□□□ 0.06
C2CD3-219ENST00000542930 FYCO1Q9BQS8 1478 aa15.45■□□□□ 0.06
C2CD3-219ENST00000542930 UGGT1Q9NYU2 1555 aa15.45■□□□□ 0.06
C2CD3-219ENST00000542930 RTEL1-TNFRSF6BF6WH68 1400 aa15.44■□□□□ 0.06
C2CD3-219ENST00000542930 KDM5DQ9BY66 1539 aa15.43■□□□□ 0.06
C2CD3-219ENST00000542930 KIF3BO15066 747 aa15.43■□□□□ 0.06
C2CD3-219ENST00000542930 WASHC2CQ9Y4E1 1318 aa15.43■□□□□ 0.06
C2CD3-219ENST00000542930 IQGAP1P46940 1657 aa15.42■□□□□ 0.06
C2CD3-219ENST00000542930 SYNMO15061 1565 aa15.42■□□□□ 0.06
C2CD3-219ENST00000542930 STRCP1A6NGW2 1772 aa15.41■□□□□ 0.06
C2CD3-219ENST00000542930 MBD5Q9P267 1494 aa15.4■□□□□ 0.06
C2CD3-219ENST00000542930 POTEAQ6S8J7 498 aa15.4■□□□□ 0.06
C2CD3-219ENST00000542930 ZNF644Q9H582 1327 aaPredicted RBP15.4■□□□□ 0.06
C2CD3-219ENST00000542930 MTUS2Q5JR59 1369 aa15.35■□□□□ 0.05
C2CD3-219ENST00000542930 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
C2CD3-219ENST00000542930 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
C2CD3-219ENST00000542930 TIAM1Q13009 1591 aa15.32■□□□□ 0.04
C2CD3-219ENST00000542930 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
C2CD3-219ENST00000542930 CCDC141Q6ZP82 1450 aa15.31■□□□□ 0.04
C2CD3-219ENST00000542930 SCAF11Q99590 1463 aaKnown RBP15.29■□□□□ 0.04
C2CD3-219ENST00000542930 XIRP1Q702N8 1843 aaKnown RBP15.28■□□□□ 0.04
C2CD3-219ENST00000542930 ERVK-7P63135 1459 aa15.27■□□□□ 0.04
C2CD3-219ENST00000542930 LTKP29376 864 aa15.27■□□□□ 0.04
C2CD3-219ENST00000542930 TXNDC2Q86VQ3 553 aa15.26■□□□□ 0.03
C2CD3-219ENST00000542930 CEP162Q5TB80 1403 aa15.26■□□□□ 0.03
C2CD3-219ENST00000542930 ABCC3O15438 1527 aa15.25■□□□□ 0.03
C2CD3-219ENST00000542930 UBR1Q8IWV7 1749 aa15.25■□□□□ 0.03
C2CD3-219ENST00000542930 ARHGAP23Q9P227 1491 aa15.25■□□□□ 0.03
C2CD3-219ENST00000542930 SLIT1O75093 1534 aa15.24■□□□□ 0.03
C2CD3-219ENST00000542930 EHBP1L1Q8N3D4 1523 aa15.24■□□□□ 0.03
C2CD3-219ENST00000542930 SETD1AO15047 1707 aaKnown RBP15.24■□□□□ 0.03
C2CD3-219ENST00000542930 TSPY4P0CV99 314 aa15.24■□□□□ 0.03
C2CD3-219ENST00000542930 TSPY10P0CW01 314 aa15.24■□□□□ 0.03
C2CD3-219ENST00000542930 NCOA2Q15596 1464 aa15.24■□□□□ 0.03
C2CD3-219ENST00000542930 SRCAPQ6ZRS2 3230 aa15.24■□□□□ 0.03
C2CD3-219ENST00000542930 CAMSAP2Q08AD1 1489 aa15.23■□□□□ 0.03
C2CD3-219ENST00000542930 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
C2CD3-219ENST00000542930 EID1Q9Y6B2 187 aa15.23■□□□□ 0.03
C2CD3-219ENST00000542930 TMEM94Q12767 1356 aa15.23■□□□□ 0.03
C2CD3-219ENST00000542930 ROBO1Q9Y6N7 1651 aa15.22■□□□□ 0.03
C2CD3-219ENST00000542930 UPF1Q92900 1129 aaKnown RBP eCLIP15.22■□□□□ 0.03
C2CD3-219ENST00000542930 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
C2CD3-219ENST00000542930 KCNA6P17658 529 aa15.19■□□□□ 0.02
C2CD3-219ENST00000542930 JCADQ9P266 1359 aa15.19■□□□□ 0.02
C2CD3-219ENST00000542930 ARHGEF5Q12774 1597 aa15.19■□□□□ 0.02
C2CD3-219ENST00000542930 PROSER2Q86WR7 435 aaPredicted RBP15.18■□□□□ 0.02
C2CD3-219ENST00000542930 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
C2CD3-219ENST00000542930 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
C2CD3-219ENST00000542930 EIF2AK4Q9P2K8 1649 aaKnown RBP15.16■□□□□ 0.02
C2CD3-219ENST00000542930 MROH1Q8NDA8 1641 aa15.15■□□□□ 0.02
C2CD3-219ENST00000542930 ZNF772Q68DY9 489 aaPredicted RBP15.15■□□□□ 0.02
C2CD3-219ENST00000542930 RBM33Q96EV2 1170 aaKnown RBP15.15■□□□□ 0.02
C2CD3-219ENST00000542930 SLAIN2Q9P270 581 aa15.15■□□□□ 0.02
C2CD3-219ENST00000542930 ARHGAP31Q2M1Z3 1444 aa15.15■□□□□ 0.02
C2CD3-219ENST00000542930 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
C2CD3-219ENST00000542930 PRDM15P57071 1507 aaPredicted RBP15.14■□□□□ 0.01
C2CD3-219ENST00000542930 MSH6P52701 1360 aa15.13■□□□□ 0.01
C2CD3-219ENST00000542930 PHLPP1O60346 1717 aa15.13■□□□□ 0.01
C2CD3-219ENST00000542930 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
C2CD3-219ENST00000542930 MAST1Q9Y2H9 1570 aa15.13■□□□□ 0.01
C2CD3-219ENST00000542930 CEP152O94986 1710 aa15.12■□□□□ 0.01
C2CD3-219ENST00000542930 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
C2CD3-219ENST00000542930 SLC26A8Q96RN1 970 aa15.12■□□□□ 0.01
C2CD3-219ENST00000542930 NKTRP30414 1462 aaKnown RBP15.12■□□□□ 0.01
C2CD3-219ENST00000542930 SPATA31A6Q5VVP1 1343 aa15.12■□□□□ 0.01
C2CD3-219ENST00000542930 TET3O43151 1660 aa15.11■□□□□ 0.01
C2CD3-219ENST00000542930 PIK3C2BO00750 1634 aa15.1■□□□□ 0.01
C2CD3-219ENST00000542930 MEX3CQ5U5Q3 659 aaKnown RBP15.1■□□□□ 0.01
C2CD3-219ENST00000542930 FGD6Q6ZV73 1430 aa15.09■□□□□ 0.01
C2CD3-219ENST00000542930 LRP6O75581 1613 aa15.09■□□□□ 0.01
C2CD3-219ENST00000542930 EFCAB6Q5THR3 1501 aa15.08■□□□□ 0.01
C2CD3-219ENST00000542930 NWD1Q149M9 1564 aa15.08■□□□□ 0
C2CD3-219ENST00000542930 COL16A1Q07092 1604 aaPredicted RBP15.08■□□□□ 0
C2CD3-219ENST00000542930 RXRBP28702 533 aa15.08■□□□□ 0
C2CD3-219ENST00000542930 KDM5AP29375 1690 aaKnown RBP15.08■□□□□ 0
C2CD3-219ENST00000542930 IDI1Q13907 227 aa15.07■□□□□ 0
C2CD3-219ENST00000542930 DUOX2Q9NRD8 1548 aa15.07■□□□□ 0
C2CD3-219ENST00000542930 CDK12Q9NYV4 1490 aaPredicted RBP15.05■□□□□ -0
C2CD3-219ENST00000542930 BCANQ96GW7 911 aa15.03■□□□□ -0
C2CD3-219ENST00000542930 NCOA3Q9Y6Q9 1424 aa15.02■□□□□ -0
C2CD3-219ENST00000542930 ERBINQ96RT1 1412 aa15.01□□□□□ -0.01
C2CD3-219ENST00000542930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.01
C2CD3-219ENST00000542930 KANK1Q14678 1352 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms