RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 LRRC9Q6ZRR7 1453 aa41.19■■■■■ 4.18
PDCD2-209ENST00000542896 ZNF335Q9H4Z2 1342 aaPredicted RBP41.18■■■■■ 4.18
PDCD2-209ENST00000542896 A2ML1A8K2U0 1454 aa41.18■■■■■ 4.18
PDCD2-209ENST00000542896 WASHC2CQ9Y4E1 1318 aa41.17■■■■■ 4.18
PDCD2-209ENST00000542896 ARHGEF5Q12774 1597 aa41.16■■■■■ 4.18
PDCD2-209ENST00000542896 KDM5DQ9BY66 1539 aa41.15■■■■■ 4.18
PDCD2-209ENST00000542896 FBXO31Q5XUX0 539 aaPredicted RBP41.15■■■■■ 4.18
PDCD2-209ENST00000542896 TNRQ92752 1358 aa41.14■■■■■ 4.18
PDCD2-209ENST00000542896 FAM135AQ9P2D6 1515 aa41.13■■■■■ 4.17
PDCD2-209ENST00000542896 PZPP20742 1482 aa41.1■■■■■ 4.17
PDCD2-209ENST00000542896 DNMT1P26358 1616 aaKnown RBP41.08■■■■■ 4.17
PDCD2-209ENST00000542896 KANK4Q5T7N3 995 aaPredicted RBP41.06■■■■■ 4.16
PDCD2-209ENST00000542896 DISP3Q9P2K9 1392 aa41.05■■■■■ 4.16
PDCD2-209ENST00000542896 MAP3K1Q13233 1512 aa41.01■■■■■ 4.16
PDCD2-209ENST00000542896 UBAP1LF5GYI3 381 aa40.98■■■■■ 4.15
PDCD2-209ENST00000542896 MIA2Q96PC5 1412 aa40.97■■■■■ 4.15
PDCD2-209ENST00000542896 MAST1Q9Y2H9 1570 aa40.96■■■■■ 4.15
PDCD2-209ENST00000542896 MYOM3Q5VTT5 1437 aa40.96■■■■■ 4.15
PDCD2-209ENST00000542896 NLRP1Q9C000 1473 aa40.92■■■■■ 4.14
PDCD2-209ENST00000542896 THEMISQ8N1K5 641 aaPredicted RBP40.92■■■■■ 4.14
PDCD2-209ENST00000542896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.91■■■■■ 4.14
PDCD2-209ENST00000542896 ANKLE2Q86XL3 938 aa40.91■■■■■ 4.14
PDCD2-209ENST00000542896 RNF17Q9BXT8 1623 aaKnown RBP40.88■■■■■ 4.13
PDCD2-209ENST00000542896 NEURL4Q96JN8 1562 aa40.86■■■■■ 4.13
PDCD2-209ENST00000542896 UGGT1Q9NYU2 1555 aa40.86■■■■■ 4.13
PDCD2-209ENST00000542896 ABCC3O15438 1527 aa40.85■■■■■ 4.13
PDCD2-209ENST00000542896 POLR1AO95602 1720 aaPredicted RBP40.84■■■■■ 4.13
PDCD2-209ENST00000542896 APLP2Q06481 763 aa40.83■■■■■ 4.13
PDCD2-209ENST00000542896 EIF2AK4Q9P2K8 1649 aaKnown RBP40.82■■■■■ 4.13
PDCD2-209ENST00000542896 ILDR2Q71H61 639 aa40.82■■■■■ 4.13
PDCD2-209ENST00000542896 ZC3H13Q5T200 1668 aaKnown RBP40.8■■■■■ 4.12
PDCD2-209ENST00000542896 SPATA31D1Q6ZQQ2 1576 aa40.8■■■■■ 4.12
PDCD2-209ENST00000542896 SHANK2Q9UPX8 1470 aa40.77■■■■■ 4.12
PDCD2-209ENST00000542896 DUOX2Q9NRD8 1548 aa40.77■■■■■ 4.12
PDCD2-209ENST00000542896 CPS1P31327 1500 aa40.76■■■■■ 4.12
PDCD2-209ENST00000542896 NPHP4O75161 1426 aaPredicted RBP40.76■■■■■ 4.11
PDCD2-209ENST00000542896 ERVK-7P63135 1459 aa40.74■■■■■ 4.11
PDCD2-209ENST00000542896 MROH1Q8NDA8 1641 aa40.73■■■■■ 4.11
PDCD2-209ENST00000542896 KIF15Q9NS87 1388 aa40.71■■■■■ 4.11
PDCD2-209ENST00000542896 MED14O60244 1454 aa40.7■■■■■ 4.11
PDCD2-209ENST00000542896 ABCC5O15440 1437 aa40.69■■■■■ 4.1
PDCD2-209ENST00000542896 RRP7BPQ9NSQ0 103 aa40.69■■■■■ 4.1
PDCD2-209ENST00000542896 SCAF1Q9H7N4 1312 aaKnown RBP40.68■■■■■ 4.1
PDCD2-209ENST00000542896 DEPDC5O75140 1603 aa40.68■■■■■ 4.1
PDCD2-209ENST00000542896 TOM1O60784 492 aa40.67■■■■■ 4.1
PDCD2-209ENST00000542896 PTPN23Q9H3S7 1636 aa40.64■■■■■ 4.1
PDCD2-209ENST00000542896 PIP4K2BP78356 416 aa40.64■■■■■ 4.1
PDCD2-209ENST00000542896 ERBINQ96RT1 1412 aa40.64■■■■■ 4.1
PDCD2-209ENST00000542896 VWDEQ8N2E2 1590 aa40.64■■■■■ 4.1
PDCD2-209ENST00000542896 CEP152O94986 1710 aa40.63■■■■■ 4.09
PDCD2-209ENST00000542896 DAPK1P53355 1430 aa40.6■■■■■ 4.09
PDCD2-209ENST00000542896 SOCS7O14512 581 aa40.6■■■■■ 4.09
PDCD2-209ENST00000542896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.59■■■■■ 4.09
PDCD2-209ENST00000542896 CROCC2H7BZ55 1655 aa40.58■■■■■ 4.09
PDCD2-209ENST00000542896 FGD6Q6ZV73 1430 aa40.58■■■■■ 4.09
PDCD2-209ENST00000542896 PRDM15P57071 1507 aaPredicted RBP40.57■■■■■ 4.09
PDCD2-209ENST00000542896 IQGAP1P46940 1657 aa40.57■■■■■ 4.09
PDCD2-209ENST00000542896 ARHGAP31Q2M1Z3 1444 aa40.56■■■■■ 4.08
PDCD2-209ENST00000542896 HSPA1LP34931 641 aa40.53■■■■■ 4.08
PDCD2-209ENST00000542896 KANK1Q14678 1352 aa40.51■■■■■ 4.08
PDCD2-209ENST00000542896 CHIC2Q9UKJ5 165 aa40.51■■■■■ 4.08
PDCD2-209ENST00000542896 ANKRD30AQ9BXX3 1397 aa40.49■■■■■ 4.07
PDCD2-209ENST00000542896 UBR1Q8IWV7 1749 aa40.48■■■■■ 4.07
PDCD2-209ENST00000542896 CFAP65Q6ZU64 1925 aaKnown RBP40.48■■■■■ 4.07
PDCD2-209ENST00000542896 SCAF11Q99590 1463 aaKnown RBP40.47■■■■■ 4.07
PDCD2-209ENST00000542896 TXNDC2Q86VQ3 553 aa40.46■■■■■ 4.07
PDCD2-209ENST00000542896 LTKP29376 864 aa40.42■■■■■ 4.06
PDCD2-209ENST00000542896 ARHGAP23Q9P227 1491 aa40.41■■■■■ 4.06
PDCD2-209ENST00000542896 EID1Q9Y6B2 187 aa40.41■■■■■ 4.06
PDCD2-209ENST00000542896 STAG3Q9UJ98 1225 aa40.4■■■■■ 4.06
PDCD2-209ENST00000542896 SLIT1O75093 1534 aa40.4■■■■■ 4.06
PDCD2-209ENST00000542896 LRRC7Q96NW7 1537 aa40.4■■■■■ 4.06
PDCD2-209ENST00000542896 STRCP1A6NGW2 1772 aa40.35■■■■■ 4.05
PDCD2-209ENST00000542896 SYNMO15061 1565 aa40.34■■■■■ 4.05
PDCD2-209ENST00000542896 LMTK2Q8IWU2 1503 aa40.33■■■■■ 4.05
PDCD2-209ENST00000542896 ALKQ9UM73 1620 aa40.32■■■■■ 4.05
PDCD2-209ENST00000542896 FAM50AQ14320 339 aaKnown RBP40.32■■■■■ 4.05
PDCD2-209ENST00000542896 PIK3C2BO00750 1634 aa40.31■■■■■ 4.04
PDCD2-209ENST00000542896 TMEM2Q9UHN6 1383 aa40.31■■■■■ 4.04
PDCD2-209ENST00000542896 IDI1Q13907 227 aa40.29■■■■■ 4.04
PDCD2-209ENST00000542896 ADGRL2O95490 1459 aa40.26■■■■■ 4.04
PDCD2-209ENST00000542896 MED1Q15648 1581 aaPredicted RBP40.25■■■■■ 4.03
PDCD2-209ENST00000542896 EFCAB6Q5THR3 1501 aa40.24■■■■■ 4.03
PDCD2-209ENST00000542896 SENP3Q9H4L4 574 aaPredicted RBP40.23■■■■■ 4.03
PDCD2-209ENST00000542896 NOS1P29475 1434 aa40.2■■■■■ 4.03
PDCD2-209ENST00000542896 ANKRD50Q9ULJ7 1429 aa40.17■■■■■ 4.02
PDCD2-209ENST00000542896 KDM5AP29375 1690 aaKnown RBP40.15■■■■■ 4.02
PDCD2-209ENST00000542896 SLC52A1Q9NWF4 448 aa40.15■■■■■ 4.02
PDCD2-209ENST00000542896 PHF23Q9BUL5 403 aaPredicted RBP40.11■■■■■ 4.01
PDCD2-209ENST00000542896 SLC26A8Q96RN1 970 aa40.09■■■■■ 4.01
PDCD2-209ENST00000542896 ADGRB3O60242 1522 aa40.09■■■■■ 4.01
PDCD2-209ENST00000542896 KCNA6P17658 529 aa40.07■■■■■ 4.01
PDCD2-209ENST00000542896 RPRD2Q5VT52 1461 aaKnown RBP40.07■■■■■ 4
PDCD2-209ENST00000542896 BCANQ96GW7 911 aa40.05■■■■■ 4
PDCD2-209ENST00000542896 TMEM94Q12767 1356 aa40.04■■■■■ 4
PDCD2-209ENST00000542896 TET3O43151 1660 aa40.02■■■■■ 4
PDCD2-209ENST00000542896 PROSER2Q86WR7 435 aaPredicted RBP40■■■■□ 3.99
PDCD2-209ENST00000542896 XIRP1Q702N8 1843 aaKnown RBP39.99■■■■□ 3.99
PDCD2-209ENST00000542896 RBM33Q96EV2 1170 aaKnown RBP39.94■■■■□ 3.98
PDCD2-209ENST00000542896 HDGFP51858 240 aaKnown RBP39.93■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms