RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
SPTB-205ENST00000542694 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
SPTB-205ENST00000542694 MROH2AA6NES4 1674 aa23.64■■□□□ 1.38
SPTB-205ENST00000542694 ADGRL2O95490 1459 aa23.64■■□□□ 1.38
SPTB-205ENST00000542694 EIF2AK4Q9P2K8 1649 aaKnown RBP23.64■■□□□ 1.38
SPTB-205ENST00000542694 RRBP1Q9P2E9 1410 aaKnown RBP23.61■■□□□ 1.37
SPTB-205ENST00000542694 ROCK1Q13464 1354 aa23.61■■□□□ 1.37
SPTB-205ENST00000542694 NPATQ14207 1427 aa23.6■■□□□ 1.37
SPTB-205ENST00000542694 ITGAEP38570 1179 aa23.59■■□□□ 1.37
SPTB-205ENST00000542694 KANK1Q14678 1352 aa23.59■■□□□ 1.37
SPTB-205ENST00000542694 C3P01024 1663 aa23.59■■□□□ 1.37
SPTB-205ENST00000542694 CLTCQ00610 1675 aaKnown RBP23.58■■□□□ 1.37
SPTB-205ENST00000542694 KDM5DQ9BY66 1539 aa23.58■■□□□ 1.36
SPTB-205ENST00000542694 RNF17Q9BXT8 1623 aaKnown RBP23.57■■□□□ 1.36
SPTB-205ENST00000542694 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
SPTB-205ENST00000542694 ANKRD50Q9ULJ7 1429 aa23.55■■□□□ 1.36
SPTB-205ENST00000542694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.53■■□□□ 1.36
SPTB-205ENST00000542694 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
SPTB-205ENST00000542694 LMTK3Q96Q04 1460 aa23.52■■□□□ 1.36
SPTB-205ENST00000542694 PREX1Q8TCU6 1659 aa23.51■■□□□ 1.35
SPTB-205ENST00000542694 ZC3H13Q5T200 1668 aaKnown RBP23.5■■□□□ 1.35
SPTB-205ENST00000542694 PZPP20742 1482 aa23.49■■□□□ 1.35
SPTB-205ENST00000542694 ABCC3O15438 1527 aa23.47■■□□□ 1.35
SPTB-205ENST00000542694 PRDM15P57071 1507 aaPredicted RBP23.46■■□□□ 1.35
SPTB-205ENST00000542694 HSPA2P54652 639 aa23.45■■□□□ 1.34
SPTB-205ENST00000542694 TNRQ92752 1358 aa23.44■■□□□ 1.34
SPTB-205ENST00000542694 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
SPTB-205ENST00000542694 MROH1Q8NDA8 1641 aa23.44■■□□□ 1.34
SPTB-205ENST00000542694 FBXO31Q5XUX0 539 aaPredicted RBP23.43■■□□□ 1.34
SPTB-205ENST00000542694 DMRT2Q9Y5R5 561 aa23.43■■□□□ 1.34
SPTB-205ENST00000542694 ARHGAP31Q2M1Z3 1444 aa23.42■■□□□ 1.34
SPTB-205ENST00000542694 LMTK2Q8IWU2 1503 aa23.38■■□□□ 1.33
SPTB-205ENST00000542694 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
SPTB-205ENST00000542694 CEP152O94986 1710 aa23.36■■□□□ 1.33
SPTB-205ENST00000542694 VWDEQ8N2E2 1590 aa23.36■■□□□ 1.33
SPTB-205ENST00000542694 CAMSAP1Q5T5Y3 1602 aa23.36■■□□□ 1.33
SPTB-205ENST00000542694 THEMISQ8N1K5 641 aaPredicted RBP23.35■■□□□ 1.33
SPTB-205ENST00000542694 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
SPTB-205ENST00000542694 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
SPTB-205ENST00000542694 ERVK-7P63135 1459 aa23.33■■□□□ 1.33
SPTB-205ENST00000542694 NUP155O75694 1391 aa23.33■■□□□ 1.33
SPTB-205ENST00000542694 SPATA31D1Q6ZQQ2 1576 aa23.32■■□□□ 1.32
SPTB-205ENST00000542694 CFAP65Q6ZU64 1925 aaKnown RBP23.32■■□□□ 1.32
SPTB-205ENST00000542694 PKD2Q13563 968 aa23.32■■□□□ 1.32
SPTB-205ENST00000542694 MYO3AQ8NEV4 1616 aa23.32■■□□□ 1.32
SPTB-205ENST00000542694 CEP170BQ9Y4F5 1589 aaPredicted RBP23.31■■□□□ 1.32
SPTB-205ENST00000542694 HFM1A2PYH4 1435 aa23.31■■□□□ 1.32
SPTB-205ENST00000542694 NAIPQ13075 1403 aa23.31■■□□□ 1.32
SPTB-205ENST00000542694 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
SPTB-205ENST00000542694 ZNF142P52746 1687 aaPredicted RBP23.3■■□□□ 1.32
SPTB-205ENST00000542694 UNC13BO14795 1591 aa23.3■■□□□ 1.32
SPTB-205ENST00000542694 SLC52A1Q9NWF4 448 aa23.28■■□□□ 1.32
SPTB-205ENST00000542694 PLA2R1Q13018 1463 aa23.27■■□□□ 1.32
SPTB-205ENST00000542694 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.32
SPTB-205ENST00000542694 ANKLE2Q86XL3 938 aa23.25■■□□□ 1.31
SPTB-205ENST00000542694 STAG3Q9UJ98 1225 aa23.25■■□□□ 1.31
SPTB-205ENST00000542694 TET3O43151 1660 aa23.25■■□□□ 1.31
SPTB-205ENST00000542694 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
SPTB-205ENST00000542694 UGGT1Q9NYU2 1555 aa23.23■■□□□ 1.31
SPTB-205ENST00000542694 GCC2Q8IWJ2 1684 aa23.23■■□□□ 1.31
SPTB-205ENST00000542694 PTPRTO14522 1441 aa23.23■■□□□ 1.31
SPTB-205ENST00000542694 IQGAP3Q86VI3 1631 aa23.22■■□□□ 1.31
SPTB-205ENST00000542694 NOS1P29475 1434 aa23.22■■□□□ 1.31
SPTB-205ENST00000542694 STRCQ7RTU9 1775 aa23.19■■□□□ 1.3
SPTB-205ENST00000542694 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
SPTB-205ENST00000542694 IDI1Q13907 227 aa23.19■■□□□ 1.3
SPTB-205ENST00000542694 EID1Q9Y6B2 187 aa23.16■■□□□ 1.3
SPTB-205ENST00000542694 HDGFP51858 240 aaKnown RBP23.15■■□□□ 1.3
SPTB-205ENST00000542694 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
SPTB-205ENST00000542694 SETD5Q9C0A6 1442 aa23.14■■□□□ 1.29
SPTB-205ENST00000542694 KDM5AP29375 1690 aaKnown RBP23.11■■□□□ 1.29
SPTB-205ENST00000542694 E9PCH4 1651 aa23.1■■□□□ 1.29
SPTB-205ENST00000542694 TXNDC2Q86VQ3 553 aa23.1■■□□□ 1.29
SPTB-205ENST00000542694 SYNMO15061 1565 aa23.1■■□□□ 1.29
SPTB-205ENST00000542694 UBR1Q8IWV7 1749 aa23.09■■□□□ 1.29
SPTB-205ENST00000542694 HRCP23327 699 aa23.09■■□□□ 1.29
SPTB-205ENST00000542694 TMEM2Q9UHN6 1383 aa23.07■■□□□ 1.28
SPTB-205ENST00000542694 PIK3C2BO00750 1634 aa23.07■■□□□ 1.28
SPTB-205ENST00000542694 CHGAP10645 457 aaKnown RBP23.06■■□□□ 1.28
SPTB-205ENST00000542694 SLIT1O75093 1534 aa23.06■■□□□ 1.28
SPTB-205ENST00000542694 MED14O60244 1454 aa23.05■■□□□ 1.28
SPTB-205ENST00000542694 POLR1AO95602 1720 aaPredicted RBP23.05■■□□□ 1.28
SPTB-205ENST00000542694 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
SPTB-205ENST00000542694 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.04■■□□□ 1.28
SPTB-205ENST00000542694 MPHOSPH9Q99550 1183 aa23.04■■□□□ 1.28
SPTB-205ENST00000542694 NPHP4O75161 1426 aaPredicted RBP23.04■■□□□ 1.28
SPTB-205ENST00000542694 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
SPTB-205ENST00000542694 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
SPTB-205ENST00000542694 LTKP29376 864 aa23.01■■□□□ 1.27
SPTB-205ENST00000542694 CERKQ8TCT0 537 aa23.01■■□□□ 1.27
SPTB-205ENST00000542694 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
SPTB-205ENST00000542694 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
SPTB-205ENST00000542694 PPP1R15AO75807 674 aaPredicted RBP22.97■■□□□ 1.27
SPTB-205ENST00000542694 NEURL4Q96JN8 1562 aa22.97■■□□□ 1.27
SPTB-205ENST00000542694 TMEM131LA2VDJ0 1609 aa22.95■■□□□ 1.26
SPTB-205ENST00000542694 BCANQ96GW7 911 aa22.95■■□□□ 1.26
SPTB-205ENST00000542694 IQGAP1P46940 1657 aa22.94■■□□□ 1.26
SPTB-205ENST00000542694 TRPM2O94759 1503 aa22.94■■□□□ 1.26
SPTB-205ENST00000542694 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
SPTB-205ENST00000542694 RIMS2Q9UQ26 1411 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms