RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 KANK1Q14678 1352 aa11.79□□□□□ -0.52
MRPL40P1-201ENST00000542687 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
MRPL40P1-201ENST00000542687 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
MRPL40P1-201ENST00000542687 DIP2CQ9Y2E4 1556 aa11.77□□□□□ -0.53
MRPL40P1-201ENST00000542687 ABCA6Q8N139 1617 aa11.76□□□□□ -0.53
MRPL40P1-201ENST00000542687 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
MRPL40P1-201ENST00000542687 PKD2Q13563 968 aa11.75□□□□□ -0.53
MRPL40P1-201ENST00000542687 MLECQ14165 292 aa11.75□□□□□ -0.53
MRPL40P1-201ENST00000542687 WASHC2CQ9Y4E1 1318 aa11.75□□□□□ -0.53
MRPL40P1-201ENST00000542687 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
MRPL40P1-201ENST00000542687 CLSPNQ9HAW4 1339 aa11.74□□□□□ -0.53
MRPL40P1-201ENST00000542687 ARHGEF40Q8TER5 1519 aa11.74□□□□□ -0.53
MRPL40P1-201ENST00000542687 REREQ9P2R6 1566 aa11.72□□□□□ -0.53
MRPL40P1-201ENST00000542687 AGLP35573 1532 aa11.72□□□□□ -0.53
MRPL40P1-201ENST00000542687 FOXD1Q16676 465 aa11.72□□□□□ -0.53
MRPL40P1-201ENST00000542687 PZPP20742 1482 aa11.71□□□□□ -0.53
MRPL40P1-201ENST00000542687 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
MRPL40P1-201ENST00000542687 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.54
MRPL40P1-201ENST00000542687 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
MRPL40P1-201ENST00000542687 FAM135AQ9P2D6 1515 aa11.7□□□□□ -0.54
MRPL40P1-201ENST00000542687 UNC13BO14795 1591 aa11.69□□□□□ -0.54
MRPL40P1-201ENST00000542687 ZEB1P37275 1124 aaPredicted RBP11.68□□□□□ -0.54
MRPL40P1-201ENST00000542687 NEUROD1Q13562 356 aa11.68□□□□□ -0.54
MRPL40P1-201ENST00000542687 SIN3AQ96ST3 1273 aa11.67□□□□□ -0.54
MRPL40P1-201ENST00000542687 ANKRD30BQ9BXX2 1392 aa11.67□□□□□ -0.54
MRPL40P1-201ENST00000542687 PRDM15P57071 1507 aaPredicted RBP11.66□□□□□ -0.54
MRPL40P1-201ENST00000542687 RNF17Q9BXT8 1623 aaKnown RBP11.65□□□□□ -0.54
MRPL40P1-201ENST00000542687 VWDEQ8N2E2 1590 aa11.65□□□□□ -0.54
MRPL40P1-201ENST00000542687 BCORL1Q5H9F3 1711 aa11.65□□□□□ -0.54
MRPL40P1-201ENST00000542687 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.55
MRPL40P1-201ENST00000542687 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
MRPL40P1-201ENST00000542687 IQGAP3Q86VI3 1631 aa11.64□□□□□ -0.55
MRPL40P1-201ENST00000542687 ABCC3O15438 1527 aa11.64□□□□□ -0.55
MRPL40P1-201ENST00000542687 MROH1Q8NDA8 1641 aa11.64□□□□□ -0.55
MRPL40P1-201ENST00000542687 ARHGAP31Q2M1Z3 1444 aa11.62□□□□□ -0.55
MRPL40P1-201ENST00000542687 CNTLNQ9NXG0 1405 aa11.62□□□□□ -0.55
MRPL40P1-201ENST00000542687 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
MRPL40P1-201ENST00000542687 ADAMTSL3P82987 1691 aa11.62□□□□□ -0.55
MRPL40P1-201ENST00000542687 TIMELESSQ9UNS1 1208 aa11.61□□□□□ -0.55
MRPL40P1-201ENST00000542687 NPATQ14207 1427 aa11.6□□□□□ -0.55
MRPL40P1-201ENST00000542687 MADDQ8WXG6 1647 aa11.6□□□□□ -0.55
MRPL40P1-201ENST00000542687 RPRD2Q5VT52 1461 aaKnown RBP11.6□□□□□ -0.55
MRPL40P1-201ENST00000542687 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
MRPL40P1-201ENST00000542687 CCDC144AA2RUR9 1427 aa11.6□□□□□ -0.55
MRPL40P1-201ENST00000542687 PTPRTO14522 1441 aa11.6□□□□□ -0.55
MRPL40P1-201ENST00000542687 PTPRMP28827 1452 aa11.59□□□□□ -0.55
MRPL40P1-201ENST00000542687 SLC52A1Q9NWF4 448 aa11.59□□□□□ -0.55
MRPL40P1-201ENST00000542687 SIGLEC1Q9BZZ2 1709 aa11.59□□□□□ -0.55
MRPL40P1-201ENST00000542687 EFCAB6Q5THR3 1501 aa11.59□□□□□ -0.55
MRPL40P1-201ENST00000542687 TET3O43151 1660 aa11.59□□□□□ -0.55
MRPL40P1-201ENST00000542687 PLA2R1Q13018 1463 aa11.58□□□□□ -0.56
MRPL40P1-201ENST00000542687 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
MRPL40P1-201ENST00000542687 RIMS1Q86UR5 1692 aaKnown RBP11.57□□□□□ -0.56
MRPL40P1-201ENST00000542687 CEBPAP49715 358 aaPredicted RBP11.57□□□□□ -0.56
MRPL40P1-201ENST00000542687 PLPPR3Q6T4P5 718 aa11.57□□□□□ -0.56
MRPL40P1-201ENST00000542687 CHGAP10645 457 aaKnown RBP11.56□□□□□ -0.56
MRPL40P1-201ENST00000542687 NOS1P29475 1434 aa11.56□□□□□ -0.56
MRPL40P1-201ENST00000542687 RGL3Q3MIN7 710 aa11.56□□□□□ -0.56
MRPL40P1-201ENST00000542687 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
MRPL40P1-201ENST00000542687 IDI1Q13907 227 aa11.55□□□□□ -0.56
MRPL40P1-201ENST00000542687 L3MBTL2Q969R5 705 aa11.55□□□□□ -0.56
MRPL40P1-201ENST00000542687 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
MRPL40P1-201ENST00000542687 E9PCH4 1651 aa11.54□□□□□ -0.56
MRPL40P1-201ENST00000542687 CAMSAP1Q5T5Y3 1602 aa11.53□□□□□ -0.56
MRPL40P1-201ENST00000542687 ERVK-7P63135 1459 aa11.53□□□□□ -0.56
MRPL40P1-201ENST00000542687 CEP152O94986 1710 aa11.53□□□□□ -0.56
MRPL40P1-201ENST00000542687 TRPM2O94759 1503 aa11.53□□□□□ -0.56
MRPL40P1-201ENST00000542687 TNRQ92752 1358 aa11.53□□□□□ -0.56
MRPL40P1-201ENST00000542687 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.57
MRPL40P1-201ENST00000542687 ZNF326Q5BKZ1 582 aaKnown RBP11.52□□□□□ -0.57
MRPL40P1-201ENST00000542687 CLTCQ00610 1675 aaKnown RBP11.52□□□□□ -0.57
MRPL40P1-201ENST00000542687 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
MRPL40P1-201ENST00000542687 DCAF11Q8TEB1 546 aa11.51□□□□□ -0.57
MRPL40P1-201ENST00000542687 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
MRPL40P1-201ENST00000542687 KDM2AQ9Y2K7 1162 aa11.5□□□□□ -0.57
MRPL40P1-201ENST00000542687 RPGRIP1LQ68CZ1 1315 aa11.49□□□□□ -0.57
MRPL40P1-201ENST00000542687 SPATA31E1Q6ZUB1 1445 aa11.48□□□□□ -0.57
MRPL40P1-201ENST00000542687 LMTK3Q96Q04 1460 aa11.48□□□□□ -0.57
MRPL40P1-201ENST00000542687 SPATA31D1Q6ZQQ2 1576 aa11.48□□□□□ -0.57
MRPL40P1-201ENST00000542687 UGGT1Q9NYU2 1555 aa11.47□□□□□ -0.57
MRPL40P1-201ENST00000542687 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
MRPL40P1-201ENST00000542687 SYNMO15061 1565 aa11.46□□□□□ -0.57
MRPL40P1-201ENST00000542687 SPHKAPQ2M3C7 1700 aa11.46□□□□□ -0.58
MRPL40P1-201ENST00000542687 MROH2AA6NES4 1674 aa11.46□□□□□ -0.58
MRPL40P1-201ENST00000542687 CLTCL1P53675 1640 aa11.46□□□□□ -0.58
MRPL40P1-201ENST00000542687 NLRP1Q9C000 1473 aa11.45□□□□□ -0.58
MRPL40P1-201ENST00000542687 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
MRPL40P1-201ENST00000542687 THEMISQ8N1K5 641 aaPredicted RBP11.45□□□□□ -0.58
MRPL40P1-201ENST00000542687 PREX1Q8TCU6 1659 aa11.44□□□□□ -0.58
MRPL40P1-201ENST00000542687 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
MRPL40P1-201ENST00000542687 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
MRPL40P1-201ENST00000542687 NEURL4Q96JN8 1562 aa11.42□□□□□ -0.58
MRPL40P1-201ENST00000542687 NUTM2DQ5VT03 806 aaPredicted RBP11.42□□□□□ -0.58
MRPL40P1-201ENST00000542687 ADGRB3O60242 1522 aa11.41□□□□□ -0.58
MRPL40P1-201ENST00000542687 C3P01024 1663 aa11.41□□□□□ -0.58
MRPL40P1-201ENST00000542687 A2ML1A8K2U0 1454 aa11.41□□□□□ -0.58
MRPL40P1-201ENST00000542687 EID1Q9Y6B2 187 aa11.41□□□□□ -0.58
MRPL40P1-201ENST00000542687 PIK3C2BO00750 1634 aa11.41□□□□□ -0.58
MRPL40P1-201ENST00000542687 ADGRF5Q8IZF2 1346 aa11.4□□□□□ -0.58
MRPL40P1-201ENST00000542687 FBXO41Q8TF61 875 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms