RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 BCORL1Q5H9F3 1711 aa9.07□□□□□ -0.96
PTPRO-208ENST00000542557 ZCCHC11Q5TAX3 1644 aaKnown RBP9.07□□□□□ -0.96
PTPRO-208ENST00000542557 IQGAP3Q86VI3 1631 aa9.07□□□□□ -0.96
PTPRO-208ENST00000542557 PRKRIP1Q9H875 184 aaPredicted RBP9.07□□□□□ -0.96
PTPRO-208ENST00000542557 HOMEZQ8IX15 550 aa9.06□□□□□ -0.96
PTPRO-208ENST00000542557 MAGI2Q86UL8 1455 aa9.06□□□□□ -0.96
PTPRO-208ENST00000542557 BCANQ96GW7 911 aa9.05□□□□□ -0.96
PTPRO-208ENST00000542557 ARAP3Q8WWN8 1544 aa9.05□□□□□ -0.96
PTPRO-208ENST00000542557 DUOX2Q9NRD8 1548 aa9.05□□□□□ -0.96
PTPRO-208ENST00000542557 ABCC1P33527 1531 aa9.05□□□□□ -0.96
PTPRO-208ENST00000542557 NEFLP07196 543 aa9.04□□□□□ -0.96
PTPRO-208ENST00000542557 ERBINQ96RT1 1412 aa9.04□□□□□ -0.96
PTPRO-208ENST00000542557 ROCK2O75116 1388 aaKnown RBP9.04□□□□□ -0.96
PTPRO-208ENST00000542557 PLCH2O75038 1416 aa9.04□□□□□ -0.96
PTPRO-208ENST00000542557 DHX29Q7Z478 1369 aaKnown RBP9.03□□□□□ -0.96
PTPRO-208ENST00000542557 LAMC1P11047 1609 aa9.03□□□□□ -0.96
PTPRO-208ENST00000542557 FKBP8Q14318 412 aa9.03□□□□□ -0.96
PTPRO-208ENST00000542557 ATP10AO60312 1499 aa9.03□□□□□ -0.96
PTPRO-208ENST00000542557 TRPM1Q7Z4N2 1603 aa9.03□□□□□ -0.96
PTPRO-208ENST00000542557 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPRO-208ENST00000542557 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
PTPRO-208ENST00000542557 E9PCH4 1651 aa9.02□□□□□ -0.97
PTPRO-208ENST00000542557 PRAG1Q86YV5 1406 aa9.01□□□□□ -0.97
PTPRO-208ENST00000542557 PLA2R1Q13018 1463 aa9.01□□□□□ -0.97
PTPRO-208ENST00000542557 EIF2AK4Q9P2K8 1649 aaKnown RBP9.01□□□□□ -0.97
PTPRO-208ENST00000542557 GPRASP1Q5JY77 1395 aa9□□□□□ -0.97
PTPRO-208ENST00000542557 CCDC184Q52MB2 194 aa9□□□□□ -0.97
PTPRO-208ENST00000542557 ZNF326Q5BKZ1 582 aaKnown RBP9□□□□□ -0.97
PTPRO-208ENST00000542557 CARD11Q9BXL7 1154 aa9□□□□□ -0.97
PTPRO-208ENST00000542557 MRS2Q9HD23 443 aa9□□□□□ -0.97
PTPRO-208ENST00000542557 ZBED9Q6R2W3 1325 aa8.99□□□□□ -0.97
PTPRO-208ENST00000542557 RTEL1-TNFRSF6BF6WH68 1400 aa8.99□□□□□ -0.97
PTPRO-208ENST00000542557 EFCAB2Q5VUJ9 269 aa8.99□□□□□ -0.97
PTPRO-208ENST00000542557 A2MP01023 1474 aa8.99□□□□□ -0.97
PTPRO-208ENST00000542557 ZFYVE16Q7Z3T8 1539 aa8.98□□□□□ -0.97
PTPRO-208ENST00000542557 KTN1Q86UP2 1357 aaKnown RBP8.98□□□□□ -0.97
PTPRO-208ENST00000542557 PRDM15P57071 1507 aaPredicted RBP8.98□□□□□ -0.97
PTPRO-208ENST00000542557 TULP1O00294 542 aaPredicted RBP8.98□□□□□ -0.97
PTPRO-208ENST00000542557 TSHZ2Q9NRE2 1034 aa8.98□□□□□ -0.97
PTPRO-208ENST00000542557 DEPDC5O75140 1603 aa8.97□□□□□ -0.97
PTPRO-208ENST00000542557 ABCA9Q8IUA7 1624 aa8.97□□□□□ -0.97
PTPRO-208ENST00000542557 DCAF11Q8TEB1 546 aa8.97□□□□□ -0.97
PTPRO-208ENST00000542557 RNF17Q9BXT8 1623 aaKnown RBP8.97□□□□□ -0.97
PTPRO-208ENST00000542557 ERICH6BQ5W0A0 696 aa8.97□□□□□ -0.97
PTPRO-208ENST00000542557 TRAPPC8Q9Y2L5 1435 aa8.96□□□□□ -0.97
PTPRO-208ENST00000542557 WDR7Q9Y4E6 1490 aa8.96□□□□□ -0.98
PTPRO-208ENST00000542557 INO80Q9ULG1 1556 aaPredicted RBP8.96□□□□□ -0.98
PTPRO-208ENST00000542557 TRPM2O94759 1503 aa8.95□□□□□ -0.98
PTPRO-208ENST00000542557 ST20-MTHFSA0A0A6YYL1 179 aa8.94□□□□□ -0.98
PTPRO-208ENST00000542557 FAM9BQ8IZU0 186 aa8.94□□□□□ -0.98
PTPRO-208ENST00000542557 COL17A1Q9UMD9 1497 aaPredicted RBP8.94□□□□□ -0.98
PTPRO-208ENST00000542557 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
PTPRO-208ENST00000542557 CEP152O94986 1710 aa8.93□□□□□ -0.98
PTPRO-208ENST00000542557 TET3O43151 1660 aa8.93□□□□□ -0.98
PTPRO-208ENST00000542557 VWDEQ8N2E2 1590 aa8.93□□□□□ -0.98
PTPRO-208ENST00000542557 NEURL4Q96JN8 1562 aa8.93□□□□□ -0.98
PTPRO-208ENST00000542557 SPHKAPQ2M3C7 1700 aa8.93□□□□□ -0.98
PTPRO-208ENST00000542557 ATP7AQ04656 1500 aa8.93□□□□□ -0.98
PTPRO-208ENST00000542557 MADDQ8WXG6 1647 aa8.92□□□□□ -0.98
PTPRO-208ENST00000542557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTPRO-208ENST00000542557 SPAG9O60271 1321 aaKnown RBP8.92□□□□□ -0.98
PTPRO-208ENST00000542557 PTPRTO14522 1441 aa8.92□□□□□ -0.98
PTPRO-208ENST00000542557 BRD4O60885 1362 aaPredicted RBP8.92□□□□□ -0.98
PTPRO-208ENST00000542557 SMG6Q86US8 1419 aaKnown RBP8.92□□□□□ -0.98
PTPRO-208ENST00000542557 FANCAO15360 1455 aa8.91□□□□□ -0.98
PTPRO-208ENST00000542557 RALBP1Q15311 655 aa8.91□□□□□ -0.98
PTPRO-208ENST00000542557 POLR3GLQ9BT43 218 aa8.91□□□□□ -0.98
PTPRO-208ENST00000542557 LRPPRCP42704 1394 aaKnown RBP8.91□□□□□ -0.98
PTPRO-208ENST00000542557 IQGAP1P46940 1657 aa8.9□□□□□ -0.98
PTPRO-208ENST00000542557 MYBBP1AQ9BQG0 1328 aaKnown RBP8.9□□□□□ -0.98
PTPRO-208ENST00000542557 STAC3Q96MF2 364 aa8.9□□□□□ -0.99
PTPRO-208ENST00000542557 PARD3Q8TEW0 1356 aa8.9□□□□□ -0.99
PTPRO-208ENST00000542557 CLTCL1P53675 1640 aa8.89□□□□□ -0.99
PTPRO-208ENST00000542557 PNISRQ8TF01 805 aaKnown RBP8.89□□□□□ -0.99
PTPRO-208ENST00000542557 MROH1Q8NDA8 1641 aa8.89□□□□□ -0.99
PTPRO-208ENST00000542557 ADGRL1O94910 1474 aa8.89□□□□□ -0.99
PTPRO-208ENST00000542557 WASHC2CQ9Y4E1 1318 aa8.89□□□□□ -0.99
PTPRO-208ENST00000542557 RGL3Q3MIN7 710 aa8.89□□□□□ -0.99
PTPRO-208ENST00000542557 KIAA1210Q9ULL0 1709 aa8.89□□□□□ -0.99
PTPRO-208ENST00000542557 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
PTPRO-208ENST00000542557 TESK2Q96S53 571 aa8.88□□□□□ -0.99
PTPRO-208ENST00000542557 ZMYM4Q5VZL5 1548 aa8.88□□□□□ -0.99
PTPRO-208ENST00000542557 SCAPERQ9BY12 1400 aa8.88□□□□□ -0.99
PTPRO-208ENST00000542557 ASXL2Q76L83 1435 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 INSRP06213 1382 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 KANK1Q14678 1352 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 CFAP74Q9C0B2 1584 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 PLCB2Q00722 1185 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 AFAP1Q8N556 730 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 TMC1Q8TDI8 760 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 PPP4R2Q9NY27 417 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 DISP3Q9P2K9 1392 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 NUDCQ9Y266 331 aa8.87□□□□□ -0.99
PTPRO-208ENST00000542557 TPRNQ4KMQ1 711 aa8.86□□□□□ -0.99
PTPRO-208ENST00000542557 EFCAB6Q5THR3 1501 aa8.86□□□□□ -0.99
PTPRO-208ENST00000542557 LMTK2Q8IWU2 1503 aa8.86□□□□□ -0.99
PTPRO-208ENST00000542557 RNF123Q5XPI4 1314 aa8.86□□□□□ -0.99
PTPRO-208ENST00000542557 KIDINS220Q9ULH0 1771 aa8.86□□□□□ -0.99
PTPRO-208ENST00000542557 PER1O15534 1290 aaPredicted RBP8.85□□□□□ -0.99
PTPRO-208ENST00000542557 NLRP13Q86W25 1043 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms