RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 KIF15Q9NS87 1388 aa23.87■■□□□ 1.41
ECHDC2-223ENST00000542552 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
ECHDC2-223ENST00000542552 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
ECHDC2-223ENST00000542552 KDM5DQ9BY66 1539 aa23.84■■□□□ 1.41
ECHDC2-223ENST00000542552 NCOA1Q15788 1441 aa23.84■■□□□ 1.41
ECHDC2-223ENST00000542552 ADGRL2O95490 1459 aa23.83■■□□□ 1.41
ECHDC2-223ENST00000542552 RRP7BPQ9NSQ0 103 aa23.83■■□□□ 1.41
ECHDC2-223ENST00000542552 PTPRKQ15262 1439 aa23.83■■□□□ 1.4
ECHDC2-223ENST00000542552 UHRF1BP1Q6BDS2 1440 aa23.83■■□□□ 1.4
ECHDC2-223ENST00000542552 ERBINQ96RT1 1412 aa23.83■■□□□ 1.4
ECHDC2-223ENST00000542552 ANKRD30AQ9BXX3 1397 aa23.82■■□□□ 1.4
ECHDC2-223ENST00000542552 MROH1Q8NDA8 1641 aa23.82■■□□□ 1.4
ECHDC2-223ENST00000542552 HSPA2P54652 639 aa23.82■■□□□ 1.4
ECHDC2-223ENST00000542552 CHIC2Q9UKJ5 165 aa23.81■■□□□ 1.4
ECHDC2-223ENST00000542552 WASHC2CQ9Y4E1 1318 aa23.8■■□□□ 1.4
ECHDC2-223ENST00000542552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.79■■□□□ 1.4
ECHDC2-223ENST00000542552 ZC3H13Q5T200 1668 aaKnown RBP23.77■■□□□ 1.4
ECHDC2-223ENST00000542552 ABCC3O15438 1527 aa23.77■■□□□ 1.4
ECHDC2-223ENST00000542552 DEPDC5O75140 1603 aa23.76■■□□□ 1.39
ECHDC2-223ENST00000542552 PZPP20742 1482 aa23.75■■□□□ 1.39
ECHDC2-223ENST00000542552 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
ECHDC2-223ENST00000542552 MYO3AQ8NEV4 1616 aa23.72■■□□□ 1.39
ECHDC2-223ENST00000542552 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
ECHDC2-223ENST00000542552 CEP152O94986 1710 aa23.7■■□□□ 1.39
ECHDC2-223ENST00000542552 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.39
ECHDC2-223ENST00000542552 ROCK1Q13464 1354 aa23.7■■□□□ 1.38
ECHDC2-223ENST00000542552 FBXO31Q5XUX0 539 aaPredicted RBP23.7■■□□□ 1.38
ECHDC2-223ENST00000542552 STRCQ7RTU9 1775 aa23.7■■□□□ 1.38
ECHDC2-223ENST00000542552 CAMSAP1Q5T5Y3 1602 aa23.68■■□□□ 1.38
ECHDC2-223ENST00000542552 VWDEQ8N2E2 1590 aa23.67■■□□□ 1.38
ECHDC2-223ENST00000542552 ANKRD50Q9ULJ7 1429 aa23.67■■□□□ 1.38
ECHDC2-223ENST00000542552 CEP170BQ9Y4F5 1589 aaPredicted RBP23.66■■□□□ 1.38
ECHDC2-223ENST00000542552 TNRQ92752 1358 aa23.65■■□□□ 1.38
ECHDC2-223ENST00000542552 ARHGAP31Q2M1Z3 1444 aa23.64■■□□□ 1.37
ECHDC2-223ENST00000542552 A2ML1A8K2U0 1454 aa23.63■■□□□ 1.37
ECHDC2-223ENST00000542552 SPATA31D1Q6ZQQ2 1576 aa23.63■■□□□ 1.37
ECHDC2-223ENST00000542552 LMTK2Q8IWU2 1503 aa23.63■■□□□ 1.37
ECHDC2-223ENST00000542552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.37
ECHDC2-223ENST00000542552 KANK1Q14678 1352 aa23.62■■□□□ 1.37
ECHDC2-223ENST00000542552 ERVK-7P63135 1459 aa23.61■■□□□ 1.37
ECHDC2-223ENST00000542552 ITGAEP38570 1179 aa23.59■■□□□ 1.37
ECHDC2-223ENST00000542552 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
ECHDC2-223ENST00000542552 CFAP65Q6ZU64 1925 aaKnown RBP23.57■■□□□ 1.36
ECHDC2-223ENST00000542552 PLA2R1Q13018 1463 aa23.57■■□□□ 1.36
ECHDC2-223ENST00000542552 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
ECHDC2-223ENST00000542552 UNC13BO14795 1591 aa23.56■■□□□ 1.36
ECHDC2-223ENST00000542552 PTPRTO14522 1441 aa23.55■■□□□ 1.36
ECHDC2-223ENST00000542552 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
ECHDC2-223ENST00000542552 UGGT1Q9NYU2 1555 aa23.5■■□□□ 1.35
ECHDC2-223ENST00000542552 NCKAP5LQ9HCH0 1330 aa23.5■■□□□ 1.35
ECHDC2-223ENST00000542552 PKD2Q13563 968 aa23.49■■□□□ 1.35
ECHDC2-223ENST00000542552 TET3O43151 1660 aa23.48■■□□□ 1.35
ECHDC2-223ENST00000542552 THEMISQ8N1K5 641 aaPredicted RBP23.47■■□□□ 1.35
ECHDC2-223ENST00000542552 RPRD2Q5VT52 1461 aaKnown RBP23.46■■□□□ 1.35
ECHDC2-223ENST00000542552 IQGAP3Q86VI3 1631 aa23.46■■□□□ 1.35
ECHDC2-223ENST00000542552 GCC2Q8IWJ2 1684 aa23.46■■□□□ 1.35
ECHDC2-223ENST00000542552 UBR1Q8IWV7 1749 aa23.45■■□□□ 1.34
ECHDC2-223ENST00000542552 NOS1P29475 1434 aa23.45■■□□□ 1.34
ECHDC2-223ENST00000542552 NAIPQ13075 1403 aa23.45■■□□□ 1.34
ECHDC2-223ENST00000542552 POLR1AO95602 1720 aaPredicted RBP23.44■■□□□ 1.34
ECHDC2-223ENST00000542552 SYNMO15061 1565 aa23.44■■□□□ 1.34
ECHDC2-223ENST00000542552 NEURL4Q96JN8 1562 aa23.42■■□□□ 1.34
ECHDC2-223ENST00000542552 NUP155O75694 1391 aa23.41■■□□□ 1.34
ECHDC2-223ENST00000542552 HFM1A2PYH4 1435 aa23.41■■□□□ 1.34
ECHDC2-223ENST00000542552 PIK3C2BO00750 1634 aa23.41■■□□□ 1.34
ECHDC2-223ENST00000542552 KDM5AP29375 1690 aaKnown RBP23.4■■□□□ 1.34
ECHDC2-223ENST00000542552 E9PCH4 1651 aa23.39■■□□□ 1.34
ECHDC2-223ENST00000542552 IDI1Q13907 227 aa23.38■■□□□ 1.33
ECHDC2-223ENST00000542552 ANKLE2Q86XL3 938 aa23.38■■□□□ 1.33
ECHDC2-223ENST00000542552 MED14O60244 1454 aa23.37■■□□□ 1.33
ECHDC2-223ENST00000542552 LTBP4Q8N2S1 1624 aa23.36■■□□□ 1.33
ECHDC2-223ENST00000542552 ARHGAP23Q9P227 1491 aa23.36■■□□□ 1.33
ECHDC2-223ENST00000542552 SLIT1O75093 1534 aa23.35■■□□□ 1.33
ECHDC2-223ENST00000542552 CERKQ8TCT0 537 aa23.35■■□□□ 1.33
ECHDC2-223ENST00000542552 SLC52A1Q9NWF4 448 aa23.35■■□□□ 1.33
ECHDC2-223ENST00000542552 ILDR1Q86SU0 546 aaPredicted RBP23.34■■□□□ 1.33
ECHDC2-223ENST00000542552 ADGRB3O60242 1522 aa23.31■■□□□ 1.32
ECHDC2-223ENST00000542552 NPHP4O75161 1426 aaPredicted RBP23.31■■□□□ 1.32
ECHDC2-223ENST00000542552 TMEM2Q9UHN6 1383 aa23.29■■□□□ 1.32
ECHDC2-223ENST00000542552 FBXO41Q8TF61 875 aa23.29■■□□□ 1.32
ECHDC2-223ENST00000542552 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
ECHDC2-223ENST00000542552 LTKP29376 864 aa23.28■■□□□ 1.32
ECHDC2-223ENST00000542552 SCAF11Q99590 1463 aaKnown RBP23.28■■□□□ 1.32
ECHDC2-223ENST00000542552 ZNF335Q9H4Z2 1342 aaPredicted RBP23.28■■□□□ 1.32
ECHDC2-223ENST00000542552 STAG3Q9UJ98 1225 aa23.26■■□□□ 1.31
ECHDC2-223ENST00000542552 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
ECHDC2-223ENST00000542552 TXNDC2Q86VQ3 553 aa23.25■■□□□ 1.31
ECHDC2-223ENST00000542552 MYO5BQ9ULV0 1848 aa23.24■■□□□ 1.31
ECHDC2-223ENST00000542552 SPHKAPQ2M3C7 1700 aa23.23■■□□□ 1.31
ECHDC2-223ENST00000542552 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
ECHDC2-223ENST00000542552 IQSEC2Q5JU85 1478 aa23.22■■□□□ 1.31
ECHDC2-223ENST00000542552 TRIM52Q96A61 297 aa23.19■■□□□ 1.3
ECHDC2-223ENST00000542552 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
ECHDC2-223ENST00000542552 TRPM2O94759 1503 aa23.15■■□□□ 1.3
ECHDC2-223ENST00000542552 CPS1P31327 1500 aa23.15■■□□□ 1.3
ECHDC2-223ENST00000542552 SETD5Q9C0A6 1442 aa23.14■■□□□ 1.29
ECHDC2-223ENST00000542552 RIMS2Q9UQ26 1411 aa23.14■■□□□ 1.29
ECHDC2-223ENST00000542552 STRCP1A6NGW2 1772 aa23.14■■□□□ 1.29
ECHDC2-223ENST00000542552 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
ECHDC2-223ENST00000542552 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms