RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TRIM52Q96A61 297 aa7.25□□□□□ -1.25
ATPAF1-212ENST00000542495 TROQ12816 1431 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-212ENST00000542495 CNTLNQ9NXG0 1405 aa7.25□□□□□ -1.25
ATPAF1-212ENST00000542495 EIF4G2P78344 907 aaKnown RBP eCLIP7.25□□□□□ -1.25
ATPAF1-212ENST00000542495 SPRYD3Q8NCJ5 442 aa7.25□□□□□ -1.25
ATPAF1-212ENST00000542495 L3MBTL2Q969R5 705 aa7.25□□□□□ -1.25
ATPAF1-212ENST00000542495 ADGRL2O95490 1459 aa7.25□□□□□ -1.25
ATPAF1-212ENST00000542495 ITSN2Q9NZM3 1697 aa7.24□□□□□ -1.25
ATPAF1-212ENST00000542495 SPATA31E1Q6ZUB1 1445 aa7.24□□□□□ -1.25
ATPAF1-212ENST00000542495 STAG3Q9UJ98 1225 aa7.24□□□□□ -1.25
ATPAF1-212ENST00000542495 PZPP20742 1482 aa7.24□□□□□ -1.25
ATPAF1-212ENST00000542495 CEP170Q5SW79 1584 aa7.24□□□□□ -1.25
ATPAF1-212ENST00000542495 ADGBQ8N7X0 1667 aa7.24□□□□□ -1.25
ATPAF1-212ENST00000542495 POLR1AO95602 1720 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-212ENST00000542495 CROCC2H7BZ55 1655 aa7.23□□□□□ -1.25
ATPAF1-212ENST00000542495 CAMSAP2Q08AD1 1489 aa7.23□□□□□ -1.25
ATPAF1-212ENST00000542495 CDK11AQ9UQ88 783 aaPredicted RBP7.23□□□□□ -1.25
ATPAF1-212ENST00000542495 GPATCH8Q9UKJ3 1502 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-212ENST00000542495 ZNF644Q9H582 1327 aaPredicted RBP7.23□□□□□ -1.25
ATPAF1-212ENST00000542495 MBD5Q9P267 1494 aa7.23□□□□□ -1.25
ATPAF1-212ENST00000542495 CCDC7Q96M83 1385 aa7.23□□□□□ -1.25
ATPAF1-212ENST00000542495 NUP160Q12769 1436 aa7.22□□□□□ -1.25
ATPAF1-212ENST00000542495 PRG4Q92954 1404 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-212ENST00000542495 NBPF8Q3BBV2 869 aa7.22□□□□□ -1.25
ATPAF1-212ENST00000542495 KIF14Q15058 1648 aa7.21□□□□□ -1.25
ATPAF1-212ENST00000542495 C11orf95C9JLR9 678 aaPredicted RBP7.21□□□□□ -1.25
ATPAF1-212ENST00000542495 NEFLP07196 543 aa7.21□□□□□ -1.25
ATPAF1-212ENST00000542495 PRKAR2AP13861 404 aaKnown RBP7.21□□□□□ -1.25
ATPAF1-212ENST00000542495 PLCD3Q8N3E9 789 aa7.21□□□□□ -1.25
ATPAF1-212ENST00000542495 PLB1Q6P1J6 1458 aa7.21□□□□□ -1.26
ATPAF1-212ENST00000542495 ARID3CA6NKF2 412 aa7.2□□□□□ -1.26
ATPAF1-212ENST00000542495 POTEIP0CG38 1075 aa7.2□□□□□ -1.26
ATPAF1-212ENST00000542495 ABCA8O94911 1581 aa7.2□□□□□ -1.26
ATPAF1-212ENST00000542495 KIAA1107Q9UPP5 1409 aa7.2□□□□□ -1.26
ATPAF1-212ENST00000542495 ZNF692Q9BU19 519 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-212ENST00000542495 SHANK2Q9UPX8 1470 aa7.2□□□□□ -1.26
ATPAF1-212ENST00000542495 CARMIL2Q6F5E8 1435 aa7.19□□□□□ -1.26
ATPAF1-212ENST00000542495 PRKRIP1Q9H875 184 aaPredicted RBP7.19□□□□□ -1.26
ATPAF1-212ENST00000542495 ABCC10Q5T3U5 1492 aa7.19□□□□□ -1.26
ATPAF1-212ENST00000542495 ERCC6L2Q5T890 1561 aa7.19□□□□□ -1.26
ATPAF1-212ENST00000542495 SHROOM2Q13796 1616 aa7.19□□□□□ -1.26
ATPAF1-212ENST00000542495 CHGAP10645 457 aaKnown RBP7.18□□□□□ -1.26
ATPAF1-212ENST00000542495 CFDP1Q9UEE9 299 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-212ENST00000542495 KDM5DQ9BY66 1539 aa7.18□□□□□ -1.26
ATPAF1-212ENST00000542495 CDC42BPAQ5VT25 1732 aa7.18□□□□□ -1.26
ATPAF1-212ENST00000542495 HNRNPUQ00839 825 aaKnown RBP eCLIP7.18□□□□□ -1.26
ATPAF1-212ENST00000542495 SSUH2Q9Y2M2 353 aa7.18□□□□□ -1.26
ATPAF1-212ENST00000542495 KIF7Q2M1P5 1343 aa7.17□□□□□ -1.26
ATPAF1-212ENST00000542495 ANKRD30AQ9BXX3 1397 aa7.17□□□□□ -1.26
ATPAF1-212ENST00000542495 UHRF1BP1Q6BDS2 1440 aa7.17□□□□□ -1.26
ATPAF1-212ENST00000542495 CCDC184Q52MB2 194 aa7.17□□□□□ -1.26
ATPAF1-212ENST00000542495 ERICH6BQ5W0A0 696 aa7.17□□□□□ -1.26
ATPAF1-212ENST00000542495 JPH4Q96JJ6 628 aa7.16□□□□□ -1.26
ATPAF1-212ENST00000542495 ANKRD50Q9ULJ7 1429 aa7.16□□□□□ -1.26
ATPAF1-212ENST00000542495 ATP10BO94823 1461 aa7.16□□□□□ -1.26
ATPAF1-212ENST00000542495 ARHGEF12Q9NZN5 1544 aa7.16□□□□□ -1.26
ATPAF1-212ENST00000542495 KDM5CP41229 1560 aa7.16□□□□□ -1.26
ATPAF1-212ENST00000542495 ARHGEF5Q12774 1597 aa7.16□□□□□ -1.26
ATPAF1-212ENST00000542495 ARID4BQ4LE39 1312 aaPredicted RBP7.15□□□□□ -1.26
ATPAF1-212ENST00000542495 DHX29Q7Z478 1369 aaKnown RBP7.15□□□□□ -1.26
ATPAF1-212ENST00000542495 PTPRGP23470 1445 aa7.15□□□□□ -1.26
ATPAF1-212ENST00000542495 BCORL1Q5H9F3 1711 aa7.15□□□□□ -1.26
ATPAF1-212ENST00000542495 SPDYE2BA6NHP3 402 aa7.15□□□□□ -1.27
ATPAF1-212ENST00000542495 SPDYE6P0CI01 402 aa7.15□□□□□ -1.27
ATPAF1-212ENST00000542495 SPDYE2Q495Y8 402 aa7.15□□□□□ -1.27
ATPAF1-212ENST00000542495 ZBED9Q6R2W3 1325 aa7.15□□□□□ -1.27
ATPAF1-212ENST00000542495 RALGAPBQ86X10 1494 aa7.15□□□□□ -1.27
ATPAF1-212ENST00000542495 C9orf84Q5VXU9 1444 aa7.14□□□□□ -1.27
ATPAF1-212ENST00000542495 CIZ1Q9ULV3 898 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-212ENST00000542495 RBM19Q9Y4C8 960 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-212ENST00000542495 USP47Q96K76 1375 aa7.13□□□□□ -1.27
ATPAF1-212ENST00000542495 PLEKHD1A6NEE1 506 aa7.13□□□□□ -1.27
ATPAF1-212ENST00000542495 ANP32EQ9BTT0 268 aa7.13□□□□□ -1.27
ATPAF1-212ENST00000542495 MRS2Q9HD23 443 aa7.13□□□□□ -1.27
ATPAF1-212ENST00000542495 KIF13AQ9H1H9 1805 aa7.12□□□□□ -1.27
ATPAF1-212ENST00000542495 NBR1Q14596 966 aa7.11□□□□□ -1.27
ATPAF1-212ENST00000542495 HS6ST3Q8IZP7 471 aa7.11□□□□□ -1.27
ATPAF1-212ENST00000542495 ZNF777Q9ULD5 760 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-212ENST00000542495 ROCK2O75116 1388 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-212ENST00000542495 NUP155O75694 1391 aa7.11□□□□□ -1.27
ATPAF1-212ENST00000542495 PREX2Q70Z35 1606 aa7.11□□□□□ -1.27
ATPAF1-212ENST00000542495 SAMD9LQ8IVG5 1584 aa7.11□□□□□ -1.27
ATPAF1-212ENST00000542495 MAST1Q9Y2H9 1570 aa7.1□□□□□ -1.27
ATPAF1-212ENST00000542495 CDC42BPBQ9Y5S2 1711 aa7.1□□□□□ -1.27
ATPAF1-212ENST00000542495 CCDC141Q6ZP82 1450 aa7.1□□□□□ -1.27
ATPAF1-212ENST00000542495 FAM9BQ8IZU0 186 aa7.1□□□□□ -1.27
ATPAF1-212ENST00000542495 PPP4R2Q9NY27 417 aa7.1□□□□□ -1.27
ATPAF1-212ENST00000542495 SMG6Q86US8 1419 aaKnown RBP7.1□□□□□ -1.27
ATPAF1-212ENST00000542495 KIF15Q9NS87 1388 aa7.09□□□□□ -1.27
ATPAF1-212ENST00000542495 FAM69CQ0P6D2 419 aa7.09□□□□□ -1.27
ATPAF1-212ENST00000542495 E9PCH4 1651 aa7.09□□□□□ -1.28
ATPAF1-212ENST00000542495 RNF123Q5XPI4 1314 aa7.08□□□□□ -1.28
ATPAF1-212ENST00000542495 UNC13BO14795 1591 aa7.08□□□□□ -1.28
ATPAF1-212ENST00000542495 TSPY4P0CV99 314 aa7.08□□□□□ -1.28
ATPAF1-212ENST00000542495 TSPY10P0CW01 314 aa7.08□□□□□ -1.28
ATPAF1-212ENST00000542495 RSPH4AQ5TD94 716 aa7.08□□□□□ -1.28
ATPAF1-212ENST00000542495 FAM135AQ9P2D6 1515 aa7.08□□□□□ -1.28
ATPAF1-212ENST00000542495 RNF25Q96BH1 459 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-212ENST00000542495 ZBTB47Q9UFB7 747 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-212ENST00000542495 KTN1Q86UP2 1357 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms