RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 UNC13BO14795 1591 aa25.35■■□□□ 1.65
GTDC1-219ENST00000542155 KDM5DQ9BY66 1539 aa25.32■■□□□ 1.64
GTDC1-219ENST00000542155 EIF2AK4Q9P2K8 1649 aaKnown RBP25.3■■□□□ 1.64
GTDC1-219ENST00000542155 ACIN1Q9UKV3 1341 aaKnown RBP25.3■■□□□ 1.64
GTDC1-219ENST00000542155 ATP10AO60312 1499 aa25.3■■□□□ 1.64
GTDC1-219ENST00000542155 SIN3AQ96ST3 1273 aa25.3■■□□□ 1.64
GTDC1-219ENST00000542155 FAM135AQ9P2D6 1515 aa25.29■■□□□ 1.64
GTDC1-219ENST00000542155 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
GTDC1-219ENST00000542155 SIGLEC1Q9BZZ2 1709 aa25.29■■□□□ 1.64
GTDC1-219ENST00000542155 MROH1Q8NDA8 1641 aa25.29■■□□□ 1.64
GTDC1-219ENST00000542155 CLSPNQ9HAW4 1339 aa25.28■■□□□ 1.64
GTDC1-219ENST00000542155 PKD2Q13563 968 aa25.28■■□□□ 1.64
GTDC1-219ENST00000542155 ARHGEF40Q8TER5 1519 aa25.26■■□□□ 1.63
GTDC1-219ENST00000542155 GGT6Q6P531 493 aa25.25■■□□□ 1.63
GTDC1-219ENST00000542155 IQGAP3Q86VI3 1631 aa25.25■■□□□ 1.63
GTDC1-219ENST00000542155 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
GTDC1-219ENST00000542155 RNF17Q9BXT8 1623 aaKnown RBP25.22■■□□□ 1.63
GTDC1-219ENST00000542155 PRDM15P57071 1507 aaPredicted RBP25.22■■□□□ 1.63
GTDC1-219ENST00000542155 VWDEQ8N2E2 1590 aa25.22■■□□□ 1.63
GTDC1-219ENST00000542155 NEUROD1Q13562 356 aa25.2■■□□□ 1.63
GTDC1-219ENST00000542155 ANKRD30BQ9BXX2 1392 aa25.2■■□□□ 1.62
GTDC1-219ENST00000542155 REREQ9P2R6 1566 aa25.19■■□□□ 1.62
GTDC1-219ENST00000542155 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
GTDC1-219ENST00000542155 KANK1Q14678 1352 aa25.14■■□□□ 1.62
GTDC1-219ENST00000542155 AGLP35573 1532 aa25.14■■□□□ 1.62
GTDC1-219ENST00000542155 CEP152O94986 1710 aa25.14■■□□□ 1.61
GTDC1-219ENST00000542155 E9PCH4 1651 aa25.12■■□□□ 1.61
GTDC1-219ENST00000542155 MLECQ14165 292 aa25.11■■□□□ 1.61
GTDC1-219ENST00000542155 WASHC2CQ9Y4E1 1318 aa25.1■■□□□ 1.61
GTDC1-219ENST00000542155 PLA2R1Q13018 1463 aa25.1■■□□□ 1.61
GTDC1-219ENST00000542155 TET3O43151 1660 aa25.1■■□□□ 1.61
GTDC1-219ENST00000542155 ABCC3O15438 1527 aa25.09■■□□□ 1.61
GTDC1-219ENST00000542155 LMTK2Q8IWU2 1503 aa25.07■■□□□ 1.6
GTDC1-219ENST00000542155 ARID4BQ4LE39 1312 aaPredicted RBP25.06■■□□□ 1.6
GTDC1-219ENST00000542155 EFCAB6Q5THR3 1501 aa25.04■■□□□ 1.6
GTDC1-219ENST00000542155 CFAP65Q6ZU64 1925 aaKnown RBP25.04■■□□□ 1.6
GTDC1-219ENST00000542155 NPATQ14207 1427 aa25.01■■□□□ 1.59
GTDC1-219ENST00000542155 RPRD2Q5VT52 1461 aaKnown RBP25.01■■□□□ 1.59
GTDC1-219ENST00000542155 CAMSAP1Q5T5Y3 1602 aa25■■□□□ 1.59
GTDC1-219ENST00000542155 PTPRTO14522 1441 aa24.98■■□□□ 1.59
GTDC1-219ENST00000542155 ZC3H13Q5T200 1668 aaKnown RBP24.97■■□□□ 1.59
GTDC1-219ENST00000542155 CLTCQ00610 1675 aaKnown RBP24.96■■□□□ 1.59
GTDC1-219ENST00000542155 SPHKAPQ2M3C7 1700 aa24.96■■□□□ 1.59
GTDC1-219ENST00000542155 PPP6R1Q9UPN7 881 aa24.95■■□□□ 1.58
GTDC1-219ENST00000542155 TONSLQ96HA7 1378 aa24.94■■□□□ 1.58
GTDC1-219ENST00000542155 L3MBTL2Q969R5 705 aa24.93■■□□□ 1.58
GTDC1-219ENST00000542155 CCDC144AA2RUR9 1427 aa24.93■■□□□ 1.58
GTDC1-219ENST00000542155 UGGT1Q9NYU2 1555 aa24.93■■□□□ 1.58
GTDC1-219ENST00000542155 TRPM2O94759 1503 aa24.92■■□□□ 1.58
GTDC1-219ENST00000542155 ARHGAP31Q2M1Z3 1444 aa24.91■■□□□ 1.58
GTDC1-219ENST00000542155 FBXO31Q5XUX0 539 aaPredicted RBP24.91■■□□□ 1.58
GTDC1-219ENST00000542155 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
GTDC1-219ENST00000542155 CLTCL1P53675 1640 aa24.89■■□□□ 1.58
GTDC1-219ENST00000542155 PPP1R15AO75807 674 aaPredicted RBP24.89■■□□□ 1.57
GTDC1-219ENST00000542155 NOS1P29475 1434 aa24.87■■□□□ 1.57
GTDC1-219ENST00000542155 ZMYM3Q14202 1370 aa24.86■■□□□ 1.57
GTDC1-219ENST00000542155 RGL3Q3MIN7 710 aa24.85■■□□□ 1.57
GTDC1-219ENST00000542155 SYNMO15061 1565 aa24.84■■□□□ 1.57
GTDC1-219ENST00000542155 ESF1Q9H501 851 aaKnown RBP24.84■■□□□ 1.57
GTDC1-219ENST00000542155 PREX1Q8TCU6 1659 aa24.83■■□□□ 1.57
GTDC1-219ENST00000542155 CNTLNQ9NXG0 1405 aa24.82■■□□□ 1.56
GTDC1-219ENST00000542155 SPATA31E1Q6ZUB1 1445 aa24.81■■□□□ 1.56
GTDC1-219ENST00000542155 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
GTDC1-219ENST00000542155 ERVK-7P63135 1459 aa24.79■■□□□ 1.56
GTDC1-219ENST00000542155 FER1L4A9Z1Z3 1794 aa24.79■■□□□ 1.56
GTDC1-219ENST00000542155 IDI1Q13907 227 aa24.78■■□□□ 1.56
GTDC1-219ENST00000542155 NBPF8Q3BBV2 869 aa24.77■■□□□ 1.56
GTDC1-219ENST00000542155 DCAF11Q8TEB1 546 aa24.76■■□□□ 1.55
GTDC1-219ENST00000542155 KDM2AQ9Y2K7 1162 aa24.76■■□□□ 1.55
GTDC1-219ENST00000542155 PIK3C2BO00750 1634 aa24.76■■□□□ 1.55
GTDC1-219ENST00000542155 MADDQ8WXG6 1647 aa24.75■■□□□ 1.55
GTDC1-219ENST00000542155 SPATA31D1Q6ZQQ2 1576 aa24.74■■□□□ 1.55
GTDC1-219ENST00000542155 MROH2AA6NES4 1674 aa24.74■■□□□ 1.55
GTDC1-219ENST00000542155 PLPPR3Q6T4P5 718 aa24.74■■□□□ 1.55
GTDC1-219ENST00000542155 KIF1BO60333 1816 aa24.73■■□□□ 1.55
GTDC1-219ENST00000542155 CHGAP10645 457 aaKnown RBP24.72■■□□□ 1.55
GTDC1-219ENST00000542155 ADAMTSL3P82987 1691 aa24.72■■□□□ 1.55
GTDC1-219ENST00000542155 C3P01024 1663 aa24.71■■□□□ 1.55
GTDC1-219ENST00000542155 SLC52A1Q9NWF4 448 aa24.7■■□□□ 1.54
GTDC1-219ENST00000542155 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
GTDC1-219ENST00000542155 RIMS1Q86UR5 1692 aaKnown RBP24.69■■□□□ 1.54
GTDC1-219ENST00000542155 ADGRB3O60242 1522 aa24.68■■□□□ 1.54
GTDC1-219ENST00000542155 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
GTDC1-219ENST00000542155 NEURL4Q96JN8 1562 aa24.65■■□□□ 1.54
GTDC1-219ENST00000542155 TNRQ92752 1358 aa24.64■■□□□ 1.53
GTDC1-219ENST00000542155 TMEM131LA2VDJ0 1609 aa24.63■■□□□ 1.53
GTDC1-219ENST00000542155 UHRF1BP1Q6BDS2 1440 aa24.63■■□□□ 1.53
GTDC1-219ENST00000542155 PRAG1Q86YV5 1406 aa24.6■■□□□ 1.53
GTDC1-219ENST00000542155 NUTM2DQ5VT03 806 aaPredicted RBP24.59■■□□□ 1.53
GTDC1-219ENST00000542155 IFT172Q9UG01 1749 aa24.59■■□□□ 1.53
GTDC1-219ENST00000542155 ADGRF5Q8IZF2 1346 aa24.57■■□□□ 1.52
GTDC1-219ENST00000542155 A2ML1A8K2U0 1454 aa24.56■■□□□ 1.52
GTDC1-219ENST00000542155 PPLO60437 1756 aa24.55■■□□□ 1.52
GTDC1-219ENST00000542155 STAG3Q9UJ98 1225 aa24.55■■□□□ 1.52
GTDC1-219ENST00000542155 NEXMIFQ5QGS0 1516 aa24.54■■□□□ 1.52
GTDC1-219ENST00000542155 NBPF1Q3BBV0 1214 aa24.54■■□□□ 1.52
GTDC1-219ENST00000542155 HIRIP3Q9BW71 556 aaPredicted RBP24.54■■□□□ 1.52
GTDC1-219ENST00000542155 RPGRIP1LQ68CZ1 1315 aa24.51■■□□□ 1.51
GTDC1-219ENST00000542155 PTPRMP28827 1452 aa24.51■■□□□ 1.51
GTDC1-219ENST00000542155 TRPM1Q7Z4N2 1603 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms