RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 GLIPR1L2Q4G1C9 344 aa6.23□□□□□ -1.41
SNHG1-219ENST00000542112 MYO15BQ96JP2 1530 aa6.23□□□□□ -1.41
SNHG1-219ENST00000542112 IRF6O14896 467 aa6.22□□□□□ -1.41
SNHG1-219ENST00000542112 PTGDRQ13258 359 aa6.22□□□□□ -1.41
SNHG1-219ENST00000542112 KDM4CQ9H3R0 1056 aa6.22□□□□□ -1.41
SNHG1-219ENST00000542112 EN1Q05925 392 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-219ENST00000542112 CCDC102AQ96A19 550 aa6.21□□□□□ -1.42
SNHG1-219ENST00000542112 GPBP1L1Q9HC44 474 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-219ENST00000542112 TIMELESSQ9UNS1 1208 aa6.21□□□□□ -1.42
SNHG1-219ENST00000542112 PCDHGA4Q9Y5G9 962 aa6.21□□□□□ -1.42
SNHG1-219ENST00000542112 PRIM1P49642 420 aaKnown RBP6.2□□□□□ -1.42
SNHG1-219ENST00000542112 AMHR2Q16671 573 aa6.2□□□□□ -1.42
SNHG1-219ENST00000542112 TYW1BQ6NUM6 668 aa6.19□□□□□ -1.42
SNHG1-219ENST00000542112 FBXW7Q969H0 707 aa6.19□□□□□ -1.42
SNHG1-219ENST00000542112 MAP3K7O43318 606 aa6.18□□□□□ -1.42
SNHG1-219ENST00000542112 SLAIN1Q8ND83 568 aa6.18□□□□□ -1.42
SNHG1-219ENST00000542112 JPH4Q96JJ6 628 aa6.18□□□□□ -1.42
SNHG1-219ENST00000542112 ABCC9O60706 1549 aa6.17□□□□□ -1.42
SNHG1-219ENST00000542112 DOK7Q18PE1 504 aa6.17□□□□□ -1.42
SNHG1-219ENST00000542112 C14orf37Q86TY3 774 aa6.17□□□□□ -1.42
SNHG1-219ENST00000542112 IL27Q8NEV9 243 aa6.17□□□□□ -1.42
SNHG1-219ENST00000542112 DDRGK1Q96HY6 314 aa6.17□□□□□ -1.42
SNHG1-219ENST00000542112 PCDHGA10Q9Y5H3 936 aa6.17□□□□□ -1.42
SNHG1-219ENST00000542112 NACADO15069 1562 aa6.16□□□□□ -1.42
SNHG1-219ENST00000542112 KDM4FA0A1W2PPD8 638 aa6.16□□□□□ -1.42
SNHG1-219ENST00000542112 RIMBP2O15034 1052 aa6.16□□□□□ -1.42
SNHG1-219ENST00000542112 FECHP22830 423 aa6.16□□□□□ -1.42
SNHG1-219ENST00000542112 DIEXFQ68CQ4 756 aaKnown RBP6.16□□□□□ -1.42
SNHG1-219ENST00000542112 CERKQ8TCT0 537 aa6.16□□□□□ -1.42
SNHG1-219ENST00000542112 ZSWIM6Q9HCJ5 1215 aa6.16□□□□□ -1.42
SNHG1-219ENST00000542112 MAMSTRQ6ZN01 415 aa6.15□□□□□ -1.42
SNHG1-219ENST00000542112 PARP9Q8IXQ6 854 aa6.15□□□□□ -1.42
SNHG1-219ENST00000542112 RBM33Q96EV2 1170 aaKnown RBP6.15□□□□□ -1.42
SNHG1-219ENST00000542112 NPDC1Q9NQX5 325 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-219ENST00000542112 UNC13AQ9UPW8 1703 aa6.15□□□□□ -1.42
SNHG1-219ENST00000542112 FOSBP53539 338 aa6.14□□□□□ -1.43
SNHG1-219ENST00000542112 TTLL12Q14166 644 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-219ENST00000542112 CCER1Q8TC90 406 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-219ENST00000542112 CDHR5Q9HBB8 845 aa6.14□□□□□ -1.43
SNHG1-219ENST00000542112 TSR1Q2NL82 804 aaKnown RBP6.13□□□□□ -1.43
SNHG1-219ENST00000542112 YTHDC1Q96MU7 727 aaKnown RBP6.13□□□□□ -1.43
SNHG1-219ENST00000542112 FAM117AQ9C073 453 aa6.13□□□□□ -1.43
SNHG1-219ENST00000542112 SCUBE2Q9NQ36 999 aa6.13□□□□□ -1.43
SNHG1-219ENST00000542112 PDIA4P13667 645 aaKnown RBP6.12□□□□□ -1.43
SNHG1-219ENST00000542112 C6orf132Q5T0Z8 1188 aa6.12□□□□□ -1.43
SNHG1-219ENST00000542112 HOMEZQ8IX15 550 aa6.12□□□□□ -1.43
SNHG1-219ENST00000542112 ZDHHC16Q969W1 377 aa6.12□□□□□ -1.43
SNHG1-219ENST00000542112 FANCIQ9NVI1 1328 aa6.12□□□□□ -1.43
SNHG1-219ENST00000542112 PSDA5PKW4 1024 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-219ENST00000542112 NUDT7P0C024 238 aa6.11□□□□□ -1.43
SNHG1-219ENST00000542112 HOXB3P14651 431 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-219ENST00000542112 CLCN1P35523 988 aa6.11□□□□□ -1.43
SNHG1-219ENST00000542112 ZNF326Q5BKZ1 582 aaKnown RBP6.11□□□□□ -1.43
SNHG1-219ENST00000542112 ZNF454Q8N9F8 522 aa6.11□□□□□ -1.43
SNHG1-219ENST00000542112 RBM27Q9P2N5 1060 aaKnown RBP6.11□□□□□ -1.43
SNHG1-219ENST00000542112 PLEKHG3A1L390 1219 aa6.1□□□□□ -1.43
SNHG1-219ENST00000542112 OATP04181 439 aa6.1□□□□□ -1.43
SNHG1-219ENST00000542112 POTEJP0CG39 1038 aa6.1□□□□□ -1.43
SNHG1-219ENST00000542112 ARSIQ5FYB1 569 aa6.1□□□□□ -1.43
SNHG1-219ENST00000542112 GPR153Q6NV75 609 aa6.1□□□□□ -1.43
SNHG1-219ENST00000542112 GIGYF2Q6Y7W6 1299 aaKnown RBP6.1□□□□□ -1.43
SNHG1-219ENST00000542112 ZNF710Q8N1W2 664 aa6.1□□□□□ -1.43
SNHG1-219ENST00000542112 GOPCQ9HD26 462 aa6.1□□□□□ -1.43
SNHG1-219ENST00000542112 SNPHO15079 494 aa6.09□□□□□ -1.43
SNHG1-219ENST00000542112 GPCPD1Q9NPB8 672 aa6.09□□□□□ -1.43
SNHG1-219ENST00000542112 PDE4CQ08493 712 aa6.08□□□□□ -1.44
SNHG1-219ENST00000542112 TAF7LQ5H9L4 462 aa6.08□□□□□ -1.44
SNHG1-219ENST00000542112 PADI6Q6TGC4 694 aa6.08□□□□□ -1.44
SNHG1-219ENST00000542112 TTC13Q8NBP0 860 aa6.08□□□□□ -1.44
SNHG1-219ENST00000542112 TMUB1Q9BVT8 246 aa6.08□□□□□ -1.44
SNHG1-219ENST00000542112 SUPT16HQ9Y5B9 1047 aaKnown RBP6.08□□□□□ -1.44
SNHG1-219ENST00000542112 RB1CC1Q8TDY2 1594 aa6.08□□□□□ -1.44
SNHG1-219ENST00000542112 POTEB2H3BUK9 544 aa6.07□□□□□ -1.44
SNHG1-219ENST00000542112 PPP4R3BQ5MIZ7 849 aa6.07□□□□□ -1.44
SNHG1-219ENST00000542112 KHSRPQ92945 711 aaKnown RBP eCLIP6.07□□□□□ -1.442e-12■■■□□ 16.9
SNHG1-219ENST00000542112 ADAM33Q9BZ11 813 aa6.07□□□□□ -1.44
SNHG1-219ENST00000542112 SALL2Q9Y467 1007 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-219ENST00000542112 MS4A1P11836 297 aa6.06□□□□□ -1.44
SNHG1-219ENST00000542112 DEKP35659 375 aaKnown RBP6.06□□□□□ -1.44
SNHG1-219ENST00000542112 PRSS12P56730 875 aa6.06□□□□□ -1.44
SNHG1-219ENST00000542112 MDM2Q00987 491 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-219ENST00000542112 METTL3Q86U44 580 aaKnown RBP6.06□□□□□ -1.44
SNHG1-219ENST00000542112 ADGRG1Q9Y653 693 aa6.06□□□□□ -1.44
SNHG1-219ENST00000542112 SCRIBQ14160 1630 aa6.06□□□□□ -1.44
SNHG1-219ENST00000542112 SHROOM4Q9ULL8 1493 aa6.05□□□□□ -1.44
SNHG1-219ENST00000542112 FGD1P98174 961 aa6.05□□□□□ -1.44
SNHG1-219ENST00000542112 RBM46Q8TBY0 533 aaKnown RBP6.05□□□□□ -1.44
SNHG1-219ENST00000542112 PXYLP1Q8TE99 480 aa6.05□□□□□ -1.44
SNHG1-219ENST00000542112 PHOX2BQ99453 314 aa6.05□□□□□ -1.44
SNHG1-219ENST00000542112 REPIN1Q9BWE0 567 aaKnown RBP6.05□□□□□ -1.44
SNHG1-219ENST00000542112 RSPH6AQ9H0K4 717 aa6.05□□□□□ -1.44
SNHG1-219ENST00000542112 BCL2L12Q9HB09 334 aa6.05□□□□□ -1.44
SNHG1-219ENST00000542112 LHX6Q9UPM6 363 aa6.05□□□□□ -1.44
SNHG1-219ENST00000542112 SSTR3P32745 418 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-219ENST00000542112 CDCA7LQ96GN5 454 aa6.04□□□□□ -1.44
SNHG1-219ENST00000542112 PCMTD1Q96MG8 357 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-219ENST00000542112 PPP1R3GB7ZBB8 358 aa6.03□□□□□ -1.44
SNHG1-219ENST00000542112 HOXB1P14653 301 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-219ENST00000542112 PTPREP23469 700 aa6.03□□□□□ -1.44
SNHG1-219ENST00000542112 SH3D19Q5HYK7 790 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms