RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 MAP3K1Q13233 1512 aa22.44■■□□□ 1.18
COPS7A-212ENST00000541866 PKD2Q13563 968 aa22.44■■□□□ 1.18
COPS7A-212ENST00000541866 ARHGEF5Q12774 1597 aa22.42■■□□□ 1.18
COPS7A-212ENST00000541866 FBXO31Q5XUX0 539 aaPredicted RBP22.41■■□□□ 1.18
COPS7A-212ENST00000541866 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
COPS7A-212ENST00000541866 MYOM3Q5VTT5 1437 aa22.39■■□□□ 1.17
COPS7A-212ENST00000541866 MYO3AQ8NEV4 1616 aa22.39■■□□□ 1.17
COPS7A-212ENST00000541866 CEP170BQ9Y4F5 1589 aaPredicted RBP22.38■■□□□ 1.17
COPS7A-212ENST00000541866 TNRQ92752 1358 aa22.38■■□□□ 1.17
COPS7A-212ENST00000541866 PLA2R1Q13018 1463 aa22.36■■□□□ 1.17
COPS7A-212ENST00000541866 KDM5DQ9BY66 1539 aa22.36■■□□□ 1.17
COPS7A-212ENST00000541866 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
COPS7A-212ENST00000541866 FAM135AQ9P2D6 1515 aa22.34■■□□□ 1.17
COPS7A-212ENST00000541866 PZPP20742 1482 aa22.34■■□□□ 1.17
COPS7A-212ENST00000541866 ZNF142P52746 1687 aaPredicted RBP22.33■■□□□ 1.17
COPS7A-212ENST00000541866 ZNF335Q9H4Z2 1342 aaPredicted RBP22.32■■□□□ 1.16
COPS7A-212ENST00000541866 LTBP4Q8N2S1 1624 aa22.32■■□□□ 1.16
COPS7A-212ENST00000541866 TCOF1Q13428 1488 aaKnown RBP22.31■■□□□ 1.16
COPS7A-212ENST00000541866 MAST1Q9Y2H9 1570 aa22.3■■□□□ 1.16
COPS7A-212ENST00000541866 THEMISQ8N1K5 641 aaPredicted RBP22.3■■□□□ 1.16
COPS7A-212ENST00000541866 ANKLE2Q86XL3 938 aa22.28■■□□□ 1.16
COPS7A-212ENST00000541866 DNMT1P26358 1616 aaKnown RBP22.28■■□□□ 1.16
COPS7A-212ENST00000541866 RRP7BPQ9NSQ0 103 aa22.27■■□□□ 1.16
COPS7A-212ENST00000541866 IQSEC2Q5JU85 1478 aa22.26■■□□□ 1.15
COPS7A-212ENST00000541866 NLRP1Q9C000 1473 aa22.23■■□□□ 1.15
COPS7A-212ENST00000541866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.23■■□□□ 1.15
COPS7A-212ENST00000541866 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
COPS7A-212ENST00000541866 ABCC5O15440 1437 aa22.23■■□□□ 1.15
COPS7A-212ENST00000541866 DUOX2Q9NRD8 1548 aa22.22■■□□□ 1.15
COPS7A-212ENST00000541866 UBAP1LF5GYI3 381 aa22.22■■□□□ 1.15
COPS7A-212ENST00000541866 ABCC3O15438 1527 aa22.21■■□□□ 1.15
COPS7A-212ENST00000541866 RNF17Q9BXT8 1623 aaKnown RBP22.21■■□□□ 1.15
COPS7A-212ENST00000541866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
COPS7A-212ENST00000541866 PTPN23Q9H3S7 1636 aa22.2■■□□□ 1.15
COPS7A-212ENST00000541866 EIF2AK4Q9P2K8 1649 aaKnown RBP22.2■■□□□ 1.15
COPS7A-212ENST00000541866 CHIC2Q9UKJ5 165 aa22.19■■□□□ 1.14
COPS7A-212ENST00000541866 FGD6Q6ZV73 1430 aa22.19■■□□□ 1.14
COPS7A-212ENST00000541866 UGGT1Q9NYU2 1555 aa22.19■■□□□ 1.14
COPS7A-212ENST00000541866 SHANK2Q9UPX8 1470 aa22.17■■□□□ 1.14
COPS7A-212ENST00000541866 DAPK1P53355 1430 aa22.17■■□□□ 1.14
COPS7A-212ENST00000541866 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
COPS7A-212ENST00000541866 ERBINQ96RT1 1412 aa22.15■■□□□ 1.14
COPS7A-212ENST00000541866 ANKRD30AQ9BXX3 1397 aa22.15■■□□□ 1.14
COPS7A-212ENST00000541866 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
COPS7A-212ENST00000541866 KANK1Q14678 1352 aa22.14■■□□□ 1.14
COPS7A-212ENST00000541866 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.13
COPS7A-212ENST00000541866 NPHP4O75161 1426 aaPredicted RBP22.13■■□□□ 1.13
COPS7A-212ENST00000541866 MROH1Q8NDA8 1641 aa22.13■■□□□ 1.13
COPS7A-212ENST00000541866 POLR1AO95602 1720 aaPredicted RBP22.12■■□□□ 1.13
COPS7A-212ENST00000541866 NEURL4Q96JN8 1562 aa22.11■■□□□ 1.13
COPS7A-212ENST00000541866 CFAP65Q6ZU64 1925 aaKnown RBP22.1■■□□□ 1.13
COPS7A-212ENST00000541866 CEP152O94986 1710 aa22.09■■□□□ 1.13
COPS7A-212ENST00000541866 TOM1O60784 492 aa22.09■■□□□ 1.13
COPS7A-212ENST00000541866 CROCC2H7BZ55 1655 aa22.09■■□□□ 1.13
COPS7A-212ENST00000541866 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
COPS7A-212ENST00000541866 ARHGAP31Q2M1Z3 1444 aa22.08■■□□□ 1.13
COPS7A-212ENST00000541866 CPS1P31327 1500 aa22.08■■□□□ 1.13
COPS7A-212ENST00000541866 STAG3Q9UJ98 1225 aa22.08■■□□□ 1.13
COPS7A-212ENST00000541866 MED14O60244 1454 aa22.08■■□□□ 1.12
COPS7A-212ENST00000541866 TXNDC2Q86VQ3 553 aa22.06■■□□□ 1.12
COPS7A-212ENST00000541866 DEPDC5O75140 1603 aa22.06■■□□□ 1.12
COPS7A-212ENST00000541866 PRDM15P57071 1507 aaPredicted RBP22.06■■□□□ 1.12
COPS7A-212ENST00000541866 PIP4K2BP78356 416 aa22.05■■□□□ 1.12
COPS7A-212ENST00000541866 EID1Q9Y6B2 187 aa22.04■■□□□ 1.12
COPS7A-212ENST00000541866 VWDEQ8N2E2 1590 aa22■■□□□ 1.11
COPS7A-212ENST00000541866 LTKP29376 864 aa22■■□□□ 1.11
COPS7A-212ENST00000541866 IQGAP1P46940 1657 aa22■■□□□ 1.11
COPS7A-212ENST00000541866 SCAF11Q99590 1463 aaKnown RBP21.99■■□□□ 1.11
COPS7A-212ENST00000541866 IDI1Q13907 227 aa21.99■■□□□ 1.11
COPS7A-212ENST00000541866 UBR1Q8IWV7 1749 aa21.98■■□□□ 1.11
COPS7A-212ENST00000541866 ADGRL2O95490 1459 aa21.97■■□□□ 1.11
COPS7A-212ENST00000541866 ANKRD50Q9ULJ7 1429 aa21.96■■□□□ 1.11
COPS7A-212ENST00000541866 LMTK2Q8IWU2 1503 aa21.96■■□□□ 1.11
COPS7A-212ENST00000541866 HSPA1LP34931 641 aa21.95■■□□□ 1.1
COPS7A-212ENST00000541866 TMEM2Q9UHN6 1383 aa21.94■■□□□ 1.1
COPS7A-212ENST00000541866 ARHGAP23Q9P227 1491 aa21.94■■□□□ 1.1
COPS7A-212ENST00000541866 SLIT1O75093 1534 aa21.94■■□□□ 1.1
COPS7A-212ENST00000541866 SLC52A1Q9NWF4 448 aa21.93■■□□□ 1.1
COPS7A-212ENST00000541866 PIK3C2BO00750 1634 aa21.91■■□□□ 1.1
COPS7A-212ENST00000541866 LRRC7Q96NW7 1537 aa21.9■■□□□ 1.1
COPS7A-212ENST00000541866 ITGAEP38570 1179 aa21.89■■□□□ 1.09
COPS7A-212ENST00000541866 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
COPS7A-212ENST00000541866 BCANQ96GW7 911 aa21.89■■□□□ 1.09
COPS7A-212ENST00000541866 EFCAB6Q5THR3 1501 aa21.89■■□□□ 1.09
COPS7A-212ENST00000541866 NOS1P29475 1434 aa21.89■■□□□ 1.09
COPS7A-212ENST00000541866 SLC26A8Q96RN1 970 aa21.85■■□□□ 1.09
COPS7A-212ENST00000541866 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
COPS7A-212ENST00000541866 STRCP1A6NGW2 1772 aa21.84■■□□□ 1.09
COPS7A-212ENST00000541866 RPRD2Q5VT52 1461 aaKnown RBP21.84■■□□□ 1.09
COPS7A-212ENST00000541866 SYNMO15061 1565 aa21.84■■□□□ 1.09
COPS7A-212ENST00000541866 MED1Q15648 1581 aaPredicted RBP21.84■■□□□ 1.09
COPS7A-212ENST00000541866 HDGFP51858 240 aaKnown RBP21.84■■□□□ 1.09
COPS7A-212ENST00000541866 ROCK1Q13464 1354 aa21.83■■□□□ 1.08
COPS7A-212ENST00000541866 CHGAP10645 457 aaKnown RBP21.82■■□□□ 1.08
COPS7A-212ENST00000541866 KCNA6P17658 529 aa21.82■■□□□ 1.08
COPS7A-212ENST00000541866 KDM5AP29375 1690 aaKnown RBP21.82■■□□□ 1.08
COPS7A-212ENST00000541866 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
COPS7A-212ENST00000541866 PROSER2Q86WR7 435 aaPredicted RBP21.79■■□□□ 1.08
COPS7A-212ENST00000541866 ADGRB3O60242 1522 aa21.79■■□□□ 1.08
COPS7A-212ENST00000541866 NUP155O75694 1391 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms