RNA–Protein interactions for RNA: ENST00000541588.5

RAB6A-207, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB6A, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-207ENST00000541588 SPATA31D1Q6ZQQ2 1576 aa29.14■■■□□ 2.26
RAB6A-207ENST00000541588 RSPH4AQ5TD94 716 aa29.14■■■□□ 2.26
RAB6A-207ENST00000541588 FBXO31Q5XUX0 539 aaPredicted RBP29.14■■■□□ 2.26
RAB6A-207ENST00000541588 UBAP1LF5GYI3 381 aa29.13■■■□□ 2.25
RAB6A-207ENST00000541588 TNRQ92752 1358 aa29.12■■■□□ 2.25
RAB6A-207ENST00000541588 KDM5DQ9BY66 1539 aa29.11■■■□□ 2.25
RAB6A-207ENST00000541588 WASHC2CQ9Y4E1 1318 aa29.1■■■□□ 2.25
RAB6A-207ENST00000541588 PZPP20742 1482 aa29.09■■■□□ 2.25
RAB6A-207ENST00000541588 FAM135AQ9P2D6 1515 aa29.07■■■□□ 2.24
RAB6A-207ENST00000541588 ARHGEF5Q12774 1597 aa29.06■■■□□ 2.24
RAB6A-207ENST00000541588 TSPY4P0CV99 314 aa29.06■■■□□ 2.24
RAB6A-207ENST00000541588 TSPY10P0CW01 314 aa29.06■■■□□ 2.24
RAB6A-207ENST00000541588 POLR1AO95602 1720 aaPredicted RBP29.06■■■□□ 2.24
RAB6A-207ENST00000541588 SOCS7O14512 581 aa29.03■■■□□ 2.24
RAB6A-207ENST00000541588 NEURL4Q96JN8 1562 aa29.01■■■□□ 2.24
RAB6A-207ENST00000541588 LRRC9Q6ZRR7 1453 aa29■■■□□ 2.23
RAB6A-207ENST00000541588 VPS8Q8N3P4 1428 aa28.99■■■□□ 2.23
RAB6A-207ENST00000541588 MIA2Q96PC5 1412 aa28.99■■■□□ 2.23
RAB6A-207ENST00000541588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.99■■■□□ 2.233e-11■■■□□ 17
RAB6A-207ENST00000541588 ANKLE2Q86XL3 938 aa28.96■■■□□ 2.23
RAB6A-207ENST00000541588 THEMISQ8N1K5 641 aaPredicted RBP28.96■■■□□ 2.23
RAB6A-207ENST00000541588 NLRP1Q9C000 1473 aa28.96■■■□□ 2.23
RAB6A-207ENST00000541588 UGGT1Q9NYU2 1555 aa28.94■■■□□ 2.22
RAB6A-207ENST00000541588 LOC105371045A0A1W2PR82 267 aa28.94■■■□□ 2.22
RAB6A-207ENST00000541588 SHANK2Q9UPX8 1470 aa28.93■■■□□ 2.22
RAB6A-207ENST00000541588 RNF17Q9BXT8 1623 aaKnown RBP28.93■■■□□ 2.22
RAB6A-207ENST00000541588 CPS1P31327 1500 aa28.93■■■□□ 2.22
RAB6A-207ENST00000541588 MAST1Q9Y2H9 1570 aa28.92■■■□□ 2.22
RAB6A-207ENST00000541588 SCAF1Q9H7N4 1312 aaKnown RBP28.92■■■□□ 2.22
RAB6A-207ENST00000541588 KANK4Q5T7N3 995 aaPredicted RBP28.91■■■□□ 2.22
RAB6A-207ENST00000541588 ABCC3O15438 1527 aa28.89■■■□□ 2.22
RAB6A-207ENST00000541588 PIP4K2BP78356 416 aa28.89■■■□□ 2.22
RAB6A-207ENST00000541588 ZC3H13Q5T200 1668 aaKnown RBP28.88■■■□□ 2.21
RAB6A-207ENST00000541588 NPHP4O75161 1426 aaPredicted RBP28.87■■■□□ 2.21
RAB6A-207ENST00000541588 VWDEQ8N2E2 1590 aa28.87■■■□□ 2.21
RAB6A-207ENST00000541588 DEPDC5O75140 1603 aa28.87■■■□□ 2.21
RAB6A-207ENST00000541588 EIF2AK4Q9P2K8 1649 aaKnown RBP28.87■■■□□ 2.21
RAB6A-207ENST00000541588 TOM1O60784 492 aa28.86■■■□□ 2.21
RAB6A-207ENST00000541588 MYOM3Q5VTT5 1437 aa28.86■■■□□ 2.21
RAB6A-207ENST00000541588 MED14O60244 1454 aa28.85■■■□□ 2.21
RAB6A-207ENST00000541588 MAP3K1Q13233 1512 aa28.84■■■□□ 2.21
RAB6A-207ENST00000541588 CFAP65Q6ZU64 1925 aaKnown RBP28.83■■■□□ 2.21
RAB6A-207ENST00000541588 HSPA1LP34931 641 aa28.83■■■□□ 2.21
RAB6A-207ENST00000541588 MROH1Q8NDA8 1641 aa28.83■■■□□ 2.21
RAB6A-207ENST00000541588 ERVK-7P63135 1459 aa28.82■■■□□ 2.2
RAB6A-207ENST00000541588 IQGAP1P46940 1657 aa28.82■■■□□ 2.2
RAB6A-207ENST00000541588 CEP152O94986 1710 aa28.81■■■□□ 2.2
RAB6A-207ENST00000541588 DUOX2Q9NRD8 1548 aa28.78■■■□□ 2.2
RAB6A-207ENST00000541588 STRCP1A6NGW2 1772 aa28.73■■■□□ 2.19
RAB6A-207ENST00000541588 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
RAB6A-207ENST00000541588 KIF15Q9NS87 1388 aa28.72■■■□□ 2.19
RAB6A-207ENST00000541588 ALKQ9UM73 1620 aa28.7■■■□□ 2.19
RAB6A-207ENST00000541588 RRP7BPQ9NSQ0 103 aa28.7■■■□□ 2.18
RAB6A-207ENST00000541588 MED1Q15648 1581 aaPredicted RBP28.7■■■□□ 2.18
RAB6A-207ENST00000541588 CROCC2H7BZ55 1655 aa28.69■■■□□ 2.18
RAB6A-207ENST00000541588 ABCC5O15440 1437 aa28.69■■■□□ 2.18
RAB6A-207ENST00000541588 PRDM15P57071 1507 aaPredicted RBP28.68■■■□□ 2.18
RAB6A-207ENST00000541588 PTPN23Q9H3S7 1636 aa28.67■■■□□ 2.18
RAB6A-207ENST00000541588 LRRC7Q96NW7 1537 aa28.67■■■□□ 2.18
RAB6A-207ENST00000541588 SCAF11Q99590 1463 aaKnown RBP28.66■■■□□ 2.18
RAB6A-207ENST00000541588 ERBINQ96RT1 1412 aa28.66■■■□□ 2.18
RAB6A-207ENST00000541588 APLP2Q06481 763 aa28.65■■■□□ 2.18
RAB6A-207ENST00000541588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.65■■■□□ 2.18
RAB6A-207ENST00000541588 ARHGAP31Q2M1Z3 1444 aa28.65■■■□□ 2.18
RAB6A-207ENST00000541588 SYNMO15061 1565 aa28.64■■■□□ 2.18
RAB6A-207ENST00000541588 LTKP29376 864 aa28.63■■■□□ 2.17
RAB6A-207ENST00000541588 TXNDC2Q86VQ3 553 aa28.62■■■□□ 2.17
RAB6A-207ENST00000541588 DAPK1P53355 1430 aa28.61■■■□□ 2.17
RAB6A-207ENST00000541588 ARHGAP23Q9P227 1491 aa28.61■■■□□ 2.17
RAB6A-207ENST00000541588 SENP3Q9H4L4 574 aaPredicted RBP28.61■■■□□ 2.17
RAB6A-207ENST00000541588 SLIT1O75093 1534 aa28.6■■■□□ 2.17
RAB6A-207ENST00000541588 EID1Q9Y6B2 187 aa28.57■■■□□ 2.16
RAB6A-207ENST00000541588 KANK1Q14678 1352 aa28.57■■■□□ 2.16
RAB6A-207ENST00000541588 FGD6Q6ZV73 1430 aa28.57■■■□□ 2.16
RAB6A-207ENST00000541588 PIK3C2BO00750 1634 aa28.57■■■□□ 2.16
RAB6A-207ENST00000541588 CHIC2Q9UKJ5 165 aa28.56■■■□□ 2.16
RAB6A-207ENST00000541588 STAG3Q9UJ98 1225 aa28.54■■■□□ 2.16
RAB6A-207ENST00000541588 ANKRD30AQ9BXX3 1397 aa28.52■■■□□ 2.16
RAB6A-207ENST00000541588 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
RAB6A-207ENST00000541588 TMEM2Q9UHN6 1383 aa28.51■■■□□ 2.16
RAB6A-207ENST00000541588 XIRP1Q702N8 1843 aaKnown RBP28.49■■■□□ 2.15
RAB6A-207ENST00000541588 IDI1Q13907 227 aa28.48■■■□□ 2.15
RAB6A-207ENST00000541588 LMTK2Q8IWU2 1503 aa28.48■■■□□ 2.15
RAB6A-207ENST00000541588 EFCAB6Q5THR3 1501 aa28.47■■■□□ 2.15
RAB6A-207ENST00000541588 KDM5AP29375 1690 aaKnown RBP28.45■■■□□ 2.15
RAB6A-207ENST00000541588 NOS1P29475 1434 aa28.39■■■□□ 2.14
RAB6A-207ENST00000541588 SLC26A8Q96RN1 970 aa28.39■■■□□ 2.14
RAB6A-207ENST00000541588 FAM50AQ14320 339 aaKnown RBP28.37■■■□□ 2.13
RAB6A-207ENST00000541588 ADGRL2O95490 1459 aa28.37■■■□□ 2.13
RAB6A-207ENST00000541588 TMEM94Q12767 1356 aa28.37■■■□□ 2.13
RAB6A-207ENST00000541588 TET3O43151 1660 aa28.36■■■□□ 2.13
RAB6A-207ENST00000541588 KCNA6P17658 529 aa28.36■■■□□ 2.13
RAB6A-207ENST00000541588 ADGRB3O60242 1522 aa28.36■■■□□ 2.13
RAB6A-207ENST00000541588 SLC52A1Q9NWF4 448 aa28.34■■■□□ 2.13
RAB6A-207ENST00000541588 RBM33Q96EV2 1170 aaKnown RBP28.33■■■□□ 2.13
RAB6A-207ENST00000541588 PROSER2Q86WR7 435 aaPredicted RBP28.32■■■□□ 2.12
RAB6A-207ENST00000541588 FAM135BQ49AJ0 1406 aa28.32■■■□□ 2.12
RAB6A-207ENST00000541588 BCANQ96GW7 911 aa28.31■■■□□ 2.12
RAB6A-207ENST00000541588 ANKRD50Q9ULJ7 1429 aa28.31■■■□□ 2.12
RAB6A-207ENST00000541588 RPRD2Q5VT52 1461 aaKnown RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms