RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PCMTD1Q96MG8 357 aaPredicted RBP8.37□□□□□ -1.07
DDB1-219ENST00000541513 TRPC6Q9Y210 931 aa8.37□□□□□ -1.07
DDB1-219ENST00000541513 MINK1Q8N4C8 1332 aaPredicted RBP8.36□□□□□ -1.07
DDB1-219ENST00000541513 MLLT3P42568 568 aaPredicted RBP8.36□□□□□ -1.07
DDB1-219ENST00000541513 FAM177A1Q8N128 213 aaPredicted RBP8.36□□□□□ -1.07
DDB1-219ENST00000541513 COLQQ9Y215 455 aaPredicted RBP8.36□□□□□ -1.07
DDB1-219ENST00000541513 NCKAP5LQ9HCH0 1330 aa8.35□□□□□ -1.07
DDB1-219ENST00000541513 BMP2KQ9NSY1 1161 aaPredicted RBP8.35□□□□□ -1.07
DDB1-219ENST00000541513 IGSF5Q9NSI5 407 aa8.34□□□□□ -1.07
DDB1-219ENST00000541513 BRD1O95696 1058 aa8.33□□□□□ -1.08
DDB1-219ENST00000541513 MROH2BQ7Z745 1585 aa8.33□□□□□ -1.08
DDB1-219ENST00000541513 PEG3Q9GZU2 1588 aa8.33□□□□□ -1.08
DDB1-219ENST00000541513 TSPYL2Q9H2G4 693 aaPredicted RBP8.33□□□□□ -1.08
DDB1-219ENST00000541513 SMARCA2P51531 1590 aa8.32□□□□□ -1.08
DDB1-219ENST00000541513 PPP1R37O75864 691 aa8.32□□□□□ -1.08
DDB1-219ENST00000541513 CCDC125Q86Z20 511 aa8.32□□□□□ -1.08
DDB1-219ENST00000541513 POM121Q96HA1 1249 aa8.32□□□□□ -1.08
DDB1-219ENST00000541513 PYGBP11216 843 aa8.31□□□□□ -1.08
DDB1-219ENST00000541513 PDE4AP27815 886 aa8.31□□□□□ -1.08
DDB1-219ENST00000541513 MAP2K5Q13163 448 aa8.31□□□□□ -1.08
DDB1-219ENST00000541513 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
DDB1-219ENST00000541513 CCDC102AQ96A19 550 aa8.3□□□□□ -1.08
DDB1-219ENST00000541513 CCDC61Q9Y6R9 512 aa8.3□□□□□ -1.08
DDB1-219ENST00000541513 ATAD2BQ9ULI0 1458 aa8.3□□□□□ -1.08
DDB1-219ENST00000541513 CCDC27Q2M243 656 aa8.29□□□□□ -1.08
DDB1-219ENST00000541513 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
DDB1-219ENST00000541513 ZNF467Q7Z7K2 595 aaPredicted RBP8.29□□□□□ -1.08
DDB1-219ENST00000541513 LARP6Q9BRS8 491 aaKnown RBP8.29□□□□□ -1.08
DDB1-219ENST00000541513 HMGXB3Q12766 1538 aa8.29□□□□□ -1.08
DDB1-219ENST00000541513 ACIN1Q9UKV3 1341 aaKnown RBP8.29□□□□□ -1.08
DDB1-219ENST00000541513 NCAPD3P42695 1498 aa8.28□□□□□ -1.08
DDB1-219ENST00000541513 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
DDB1-219ENST00000541513 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
DDB1-219ENST00000541513 CRISPLD2Q9H0B8 497 aa8.28□□□□□ -1.08
DDB1-219ENST00000541513 USTQ9Y2C2 406 aa8.28□□□□□ -1.08
DDB1-219ENST00000541513 IRF6O14896 467 aa8.27□□□□□ -1.09
DDB1-219ENST00000541513 FBXO22Q8NEZ5 403 aa8.27□□□□□ -1.09
DDB1-219ENST00000541513 KIF12Q96FN5 646 aa8.27□□□□□ -1.09
DDB1-219ENST00000541513 DDX27Q96GQ7 796 aaKnown RBP8.27□□□□□ -1.09
DDB1-219ENST00000541513 RSF1Q96T23 1441 aaPredicted RBP8.27□□□□□ -1.09
DDB1-219ENST00000541513 COG6Q9Y2V7 657 aa8.26□□□□□ -1.09
DDB1-219ENST00000541513 WIZO95785 1651 aa8.26□□□□□ -1.09
DDB1-219ENST00000541513 SPDYE5A6NIY4 337 aa8.25□□□□□ -1.09
DDB1-219ENST00000541513 SND1Q7KZF4 910 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■■■■□ 20.9
DDB1-219ENST00000541513 SLAIN1Q8ND83 568 aa8.24□□□□□ -1.09
DDB1-219ENST00000541513 TIE1P35590 1138 aa8.23□□□□□ -1.09
DDB1-219ENST00000541513 NLRP6P59044 892 aa8.23□□□□□ -1.09
DDB1-219ENST00000541513 OXER1Q8TDS5 423 aa8.23□□□□□ -1.09
DDB1-219ENST00000541513 BAZ1BQ9UIG0 1483 aaKnown RBP8.23□□□□□ -1.09
DDB1-219ENST00000541513 UNCXA6NJT0 531 aa8.22□□□□□ -1.09
DDB1-219ENST00000541513 BRD2P25440 801 aaKnown RBP8.22□□□□□ -1.09
DDB1-219ENST00000541513 ZNF330Q9Y3S2 320 aaPredicted RBP8.22□□□□□ -1.09
DDB1-219ENST00000541513 RBM47A0AV96 593 aaKnown RBP8.21□□□□□ -1.1
DDB1-219ENST00000541513 TTLL13PA6NNM8 815 aa8.21□□□□□ -1.1
DDB1-219ENST00000541513 SEC24BO95487 1268 aa8.21□□□□□ -1.1
DDB1-219ENST00000541513 SPDYE16A6NNV3 312 aaPredicted RBP8.2□□□□□ -1.1
DDB1-219ENST00000541513 MAP3K13O43283 966 aa8.2□□□□□ -1.1
DDB1-219ENST00000541513 MS4A1P11836 297 aa8.2□□□□□ -1.1
DDB1-219ENST00000541513 TOP2AP11388 1531 aaKnown RBP8.19□□□□□ -1.1
DDB1-219ENST00000541513 PDIA6Q15084 440 aa8.19□□□□□ -1.1
DDB1-219ENST00000541513 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
DDB1-219ENST00000541513 SOX12O15370 315 aa8.18□□□□□ -1.1
DDB1-219ENST00000541513 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
DDB1-219ENST00000541513 GIGYF2Q6Y7W6 1299 aaKnown RBP8.18□□□□□ -1.1
DDB1-219ENST00000541513 PBXIP1Q96AQ6 731 aa8.18□□□□□ -1.1
DDB1-219ENST00000541513 BANK1Q8NDB2 785 aa8.17□□□□□ -1.1
DDB1-219ENST00000541513 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
DDB1-219ENST00000541513 IVNS1ABPQ9Y6Y0 642 aa8.17□□□□□ -1.1
DDB1-219ENST00000541513 TMEM121BQ9BXQ6 578 aaPredicted RBP8.16□□□□□ -1.1
DDB1-219ENST00000541513 GNPATO15228 680 aa8.15□□□□□ -1.1
DDB1-219ENST00000541513 TBC1D12O60347 775 aa8.15□□□□□ -1.1
DDB1-219ENST00000541513 MYT1LQ9UL68 1186 aa8.15□□□□□ -1.1
DDB1-219ENST00000541513 PPM1GO15355 546 aaPredicted RBP8.14□□□□□ -1.11
DDB1-219ENST00000541513 DHX37Q8IY37 1157 aaKnown RBP8.14□□□□□ -1.11
DDB1-219ENST00000541513 TRIM35Q9UPQ4 493 aa8.14□□□□□ -1.11
DDB1-219ENST00000541513 CSB-PGBD3P0DP91 1061 aa8.13□□□□□ -1.11
DDB1-219ENST00000541513 PSEN1P49768 467 aa8.13□□□□□ -1.11
DDB1-219ENST00000541513 IER5LQ5T953 404 aa8.13□□□□□ -1.11
DDB1-219ENST00000541513 CALR3Q96L12 384 aaKnown RBP8.13□□□□□ -1.11
DDB1-219ENST00000541513 HIC1Q14526 733 aa8.12□□□□□ -1.11
DDB1-219ENST00000541513 POLR3GLQ9BT43 218 aa8.12□□□□□ -1.11
DDB1-219ENST00000541513 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
DDB1-219ENST00000541513 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
DDB1-219ENST00000541513 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
DDB1-219ENST00000541513 SPATA32Q96LK8 384 aa8.11□□□□□ -1.11
DDB1-219ENST00000541513 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.11□□□□□ -1.11
DDB1-219ENST00000541513 PCDHB13Q9Y5F0 798 aa8.11□□□□□ -1.11
DDB1-219ENST00000541513 SOCS7O14512 581 aa8.1□□□□□ -1.11
DDB1-219ENST00000541513 SRPK2P78362 688 aaKnown RBP8.1□□□□□ -1.11
DDB1-219ENST00000541513 WWC1Q8IX03 1113 aa8.1□□□□□ -1.11
DDB1-219ENST00000541513 EFCAB3Q8N7B9 438 aa8.1□□□□□ -1.11
DDB1-219ENST00000541513 GLMNQ92990 594 aa8.1□□□□□ -1.11
DDB1-219ENST00000541513 C8orf37Q96NL8 207 aa8.1□□□□□ -1.11
DDB1-219ENST00000541513 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
DDB1-219ENST00000541513 KIAA1522Q9P206 1035 aaPredicted RBP8.1□□□□□ -1.11
DDB1-219ENST00000541513 GNEQ9Y223 722 aaKnown RBP8.1□□□□□ -1.11
DDB1-219ENST00000541513 POTEB3A0JP26 581 aa8.09□□□□□ -1.11
DDB1-219ENST00000541513 ERCC3P19447 782 aa8.09□□□□□ -1.11
DDB1-219ENST00000541513 POTEBQ6S5H4 581 aa8.09□□□□□ -1.11
DDB1-219ENST00000541513 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms