RNA–Protein interactions for RNA: ENST00000541453.1

GABARAPL1-209, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-209ENST00000541453 HRCP23327 699 aa16.22■□□□□ 0.19
GABARAPL1-209ENST00000541453 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
GABARAPL1-209ENST00000541453 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
GABARAPL1-209ENST00000541453 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
GABARAPL1-209ENST00000541453 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
GABARAPL1-209ENST00000541453 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
GABARAPL1-209ENST00000541453 REREQ9P2R6 1566 aa16.2■□□□□ 0.18
GABARAPL1-209ENST00000541453 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
GABARAPL1-209ENST00000541453 KIF3BO15066 747 aa16.14■□□□□ 0.17
GABARAPL1-209ENST00000541453 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
GABARAPL1-209ENST00000541453 AGLP35573 1532 aa16.14■□□□□ 0.17
GABARAPL1-209ENST00000541453 UNC13BO14795 1591 aa16.13■□□□□ 0.17
GABARAPL1-209ENST00000541453 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
GABARAPL1-209ENST00000541453 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
GABARAPL1-209ENST00000541453 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
GABARAPL1-209ENST00000541453 KANK1Q14678 1352 aa16.1■□□□□ 0.17
GABARAPL1-209ENST00000541453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.17
GABARAPL1-209ENST00000541453 ARID4BQ4LE39 1312 aaPredicted RBP16.09■□□□□ 0.17
GABARAPL1-209ENST00000541453 NUP155O75694 1391 aa16.09■□□□□ 0.17
GABARAPL1-209ENST00000541453 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.17
GABARAPL1-209ENST00000541453 GGT6Q6P531 493 aa16.08■□□□□ 0.16
GABARAPL1-209ENST00000541453 PRDM15P57071 1507 aaPredicted RBP16.08■□□□□ 0.16
GABARAPL1-209ENST00000541453 KDM5DQ9BY66 1539 aa16.08■□□□□ 0.16
GABARAPL1-209ENST00000541453 IQGAP3Q86VI3 1631 aa16.07■□□□□ 0.16
GABARAPL1-209ENST00000541453 MROH1Q8NDA8 1641 aa16.06■□□□□ 0.16
GABARAPL1-209ENST00000541453 ZC3H13Q5T200 1668 aaKnown RBP16.05■□□□□ 0.16
GABARAPL1-209ENST00000541453 FAM135AQ9P2D6 1515 aa16.04■□□□□ 0.16
GABARAPL1-209ENST00000541453 VWDEQ8N2E2 1590 aa16.04■□□□□ 0.16
GABARAPL1-209ENST00000541453 MPHOSPH9Q99550 1183 aa16.03■□□□□ 0.16
GABARAPL1-209ENST00000541453 PZPP20742 1482 aa16.03■□□□□ 0.16
GABARAPL1-209ENST00000541453 CEP152O94986 1710 aa16.02■□□□□ 0.16
GABARAPL1-209ENST00000541453 WASHC2CQ9Y4E1 1318 aa16.02■□□□□ 0.16
GABARAPL1-209ENST00000541453 MLECQ14165 292 aa16.02■□□□□ 0.16
GABARAPL1-209ENST00000541453 TET3O43151 1660 aa16.02■□□□□ 0.15
GABARAPL1-209ENST00000541453 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
GABARAPL1-209ENST00000541453 ESF1Q9H501 851 aaKnown RBP16.01■□□□□ 0.15
GABARAPL1-209ENST00000541453 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
GABARAPL1-209ENST00000541453 LMTK2Q8IWU2 1503 aa15.99■□□□□ 0.15
GABARAPL1-209ENST00000541453 ABCC3O15438 1527 aa15.99■□□□□ 0.15
GABARAPL1-209ENST00000541453 CLTCQ00610 1675 aaKnown RBP15.98■□□□□ 0.15
GABARAPL1-209ENST00000541453 CAMSAP1Q5T5Y3 1602 aa15.97■□□□□ 0.15
GABARAPL1-209ENST00000541453 PKD2Q13563 968 aa15.97■□□□□ 0.15
GABARAPL1-209ENST00000541453 FER1L4A9Z1Z3 1794 aa15.97■□□□□ 0.15
GABARAPL1-209ENST00000541453 E9PCH4 1651 aa15.96■□□□□ 0.15
GABARAPL1-209ENST00000541453 EFCAB6Q5THR3 1501 aa15.96■□□□□ 0.15
GABARAPL1-209ENST00000541453 CNTLNQ9NXG0 1405 aa15.95■□□□□ 0.14
GABARAPL1-209ENST00000541453 CLSPNQ9HAW4 1339 aa15.94■□□□□ 0.14
GABARAPL1-209ENST00000541453 MROH2AA6NES4 1674 aa15.94■□□□□ 0.14
GABARAPL1-209ENST00000541453 RPRD2Q5VT52 1461 aaKnown RBP15.93■□□□□ 0.14
GABARAPL1-209ENST00000541453 CFAP65Q6ZU64 1925 aaKnown RBP15.93■□□□□ 0.14
GABARAPL1-209ENST00000541453 ARHGAP31Q2M1Z3 1444 aa15.92■□□□□ 0.14
GABARAPL1-209ENST00000541453 ADAMTSL3P82987 1691 aa15.92■□□□□ 0.14
GABARAPL1-209ENST00000541453 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
GABARAPL1-209ENST00000541453 MADDQ8WXG6 1647 aa15.9■□□□□ 0.14
GABARAPL1-209ENST00000541453 NPATQ14207 1427 aa15.89■□□□□ 0.13
GABARAPL1-209ENST00000541453 RIMS1Q86UR5 1692 aaKnown RBP15.89■□□□□ 0.13
GABARAPL1-209ENST00000541453 ZMYM3Q14202 1370 aa15.88■□□□□ 0.13
GABARAPL1-209ENST00000541453 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
GABARAPL1-209ENST00000541453 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
GABARAPL1-209ENST00000541453 PREX1Q8TCU6 1659 aa15.87■□□□□ 0.13
GABARAPL1-209ENST00000541453 C3P01024 1663 aa15.86■□□□□ 0.13
GABARAPL1-209ENST00000541453 PTPRTO14522 1441 aa15.85■□□□□ 0.13
GABARAPL1-209ENST00000541453 TRPM2O94759 1503 aa15.84■□□□□ 0.13
GABARAPL1-209ENST00000541453 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
GABARAPL1-209ENST00000541453 NOS1P29475 1434 aa15.82■□□□□ 0.12
GABARAPL1-209ENST00000541453 ERVK-7P63135 1459 aa15.82■□□□□ 0.12
GABARAPL1-209ENST00000541453 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
GABARAPL1-209ENST00000541453 SPATA31D1Q6ZQQ2 1576 aa15.82■□□□□ 0.12
GABARAPL1-209ENST00000541453 KIF1BO60333 1816 aa15.81■□□□□ 0.12
GABARAPL1-209ENST00000541453 FBXO31Q5XUX0 539 aaPredicted RBP15.81■□□□□ 0.12
GABARAPL1-209ENST00000541453 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
GABARAPL1-209ENST00000541453 SIN3AQ96ST3 1273 aa15.8■□□□□ 0.12
GABARAPL1-209ENST00000541453 SYNMO15061 1565 aa15.79■□□□□ 0.12
GABARAPL1-209ENST00000541453 CEBPAP49715 358 aaPredicted RBP15.79■□□□□ 0.12
GABARAPL1-209ENST00000541453 SLC52A1Q9NWF4 448 aa15.79■□□□□ 0.12
GABARAPL1-209ENST00000541453 CLTCL1P53675 1640 aa15.79■□□□□ 0.12
GABARAPL1-209ENST00000541453 PIK3C2BO00750 1634 aa15.78■□□□□ 0.12
GABARAPL1-209ENST00000541453 PTPRMP28827 1452 aa15.77■□□□□ 0.11
GABARAPL1-209ENST00000541453 SETD1BQ9UPS6 1966 aaKnown RBP15.76■□□□□ 0.11
GABARAPL1-209ENST00000541453 TNRQ92752 1358 aa15.76■□□□□ 0.11
GABARAPL1-209ENST00000541453 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
GABARAPL1-209ENST00000541453 ZBTB22O15209 634 aa15.76■□□□□ 0.11
GABARAPL1-209ENST00000541453 ZEB1P37275 1124 aaPredicted RBP15.76■□□□□ 0.11
GABARAPL1-209ENST00000541453 UGGT1Q9NYU2 1555 aa15.75■□□□□ 0.11
GABARAPL1-209ENST00000541453 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
GABARAPL1-209ENST00000541453 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
GABARAPL1-209ENST00000541453 NEURL4Q96JN8 1562 aa15.74■□□□□ 0.11
GABARAPL1-209ENST00000541453 KDM4FA0A1W2PPD8 638 aa15.73■□□□□ 0.11
GABARAPL1-209ENST00000541453 IDI1Q13907 227 aa15.73■□□□□ 0.11
GABARAPL1-209ENST00000541453 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
GABARAPL1-209ENST00000541453 KDM5AP29375 1690 aaKnown RBP15.72■□□□□ 0.11
GABARAPL1-209ENST00000541453 MSH5O43196 834 aa15.71■□□□□ 0.11
GABARAPL1-209ENST00000541453 CHGAP10645 457 aaKnown RBP15.71■□□□□ 0.11
GABARAPL1-209ENST00000541453 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
GABARAPL1-209ENST00000541453 MYO3AQ8NEV4 1616 aa15.7■□□□□ 0.1
GABARAPL1-209ENST00000541453 MYO5BQ9ULV0 1848 aa15.7■□□□□ 0.1
GABARAPL1-209ENST00000541453 SPATA31E1Q6ZUB1 1445 aa15.69■□□□□ 0.1
GABARAPL1-209ENST00000541453 ADGRB3O60242 1522 aa15.69■□□□□ 0.1
GABARAPL1-209ENST00000541453 TMEM131LA2VDJ0 1609 aa15.69■□□□□ 0.1
GABARAPL1-209ENST00000541453 RGL3Q3MIN7 710 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms