RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 MAFGO15525 162 aa8.12□□□□□ -1.11
LMO3-225ENST00000541295 CCNB3Q8WWL7 1395 aa8.12□□□□□ -1.11
LMO3-225ENST00000541295 MAGI1Q96QZ7 1491 aaPredicted RBP8.12□□□□□ -1.11
LMO3-225ENST00000541295 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
LMO3-225ENST00000541295 SYNJ2O15056 1496 aa8.11□□□□□ -1.11
LMO3-225ENST00000541295 RGS3P49796 1198 aa8.11□□□□□ -1.11
LMO3-225ENST00000541295 SAMD9Q5K651 1589 aa8.11□□□□□ -1.11
LMO3-225ENST00000541295 PHLDB1Q86UU1 1377 aa8.11□□□□□ -1.11
LMO3-225ENST00000541295 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
LMO3-225ENST00000541295 KIAA0586Q9BVV6 1533 aa8.1□□□□□ -1.11
LMO3-225ENST00000541295 FAM9BQ8IZU0 186 aa8.09□□□□□ -1.11
LMO3-225ENST00000541295 CFAP43Q8NDM7 1665 aa8.09□□□□□ -1.11
LMO3-225ENST00000541295 TNNT2P45379 298 aaPredicted RBP8.09□□□□□ -1.11
LMO3-225ENST00000541295 JPH4Q96JJ6 628 aa8.09□□□□□ -1.11
LMO3-225ENST00000541295 PLEKHD1A6NEE1 506 aa8.08□□□□□ -1.12
LMO3-225ENST00000541295 CEP170Q5SW79 1584 aa8.08□□□□□ -1.12
LMO3-225ENST00000541295 CC2D1BQ5T0F9 858 aaKnown RBP8.08□□□□□ -1.12
LMO3-225ENST00000541295 RRBP1Q9P2E9 1410 aaKnown RBP8.08□□□□□ -1.12
LMO3-225ENST00000541295 FAM43AQ8N2R8 423 aa8.08□□□□□ -1.12
LMO3-225ENST00000541295 CDK13Q14004 1512 aaKnown RBP8.07□□□□□ -1.12
LMO3-225ENST00000541295 TRIM44Q96DX7 344 aaPredicted RBP8.07□□□□□ -1.12
LMO3-225ENST00000541295 KDM4AO75164 1064 aa8.07□□□□□ -1.12
LMO3-225ENST00000541295 PRDM4Q9UKN5 801 aa8.07□□□□□ -1.12
LMO3-225ENST00000541295 MAP3K1Q13233 1512 aa8.07□□□□□ -1.12
LMO3-225ENST00000541295 HSP90AB4PQ58FF6 505 aa8.06□□□□□ -1.12
LMO3-225ENST00000541295 UGGT2Q9NYU1 1516 aa8.06□□□□□ -1.12
LMO3-225ENST00000541295 KIAA0556O60303 1618 aa8.05□□□□□ -1.12
LMO3-225ENST00000541295 DISP1Q96F81 1524 aa8.05□□□□□ -1.12
LMO3-225ENST00000541295 SOX12O15370 315 aa8.05□□□□□ -1.12
LMO3-225ENST00000541295 CARMIL2Q6F5E8 1435 aa8.05□□□□□ -1.12
LMO3-225ENST00000541295 HECW1Q76N89 1606 aa8.05□□□□□ -1.12
LMO3-225ENST00000541295 FOXD4L5Q5VV16 416 aaPredicted RBP8.04□□□□□ -1.12
LMO3-225ENST00000541295 FOXD4L4Q8WXT5 416 aaPredicted RBP8.04□□□□□ -1.12
LMO3-225ENST00000541295 ZNF830Q96NB3 372 aaPredicted RBP8.04□□□□□ -1.12
LMO3-225ENST00000541295 ANP32AP39687 249 aaKnown RBP8.04□□□□□ -1.12
LMO3-225ENST00000541295 MTMR7Q9Y216 660 aa8.04□□□□□ -1.12
LMO3-225ENST00000541295 LRRIQ1Q96JM4 1722 aa8.04□□□□□ -1.12
LMO3-225ENST00000541295 CENPJQ9HC77 1338 aaPredicted RBP8.04□□□□□ -1.12
LMO3-225ENST00000541295 EPRSP07814 1512 aaKnown RBP8.03□□□□□ -1.12
LMO3-225ENST00000541295 NCOA2Q15596 1464 aa8.03□□□□□ -1.12
LMO3-225ENST00000541295 NUP160Q12769 1436 aa8.03□□□□□ -1.12
LMO3-225ENST00000541295 POTEDQ86YR6 584 aa8.03□□□□□ -1.12
LMO3-225ENST00000541295 PLB1Q6P1J6 1458 aa8.03□□□□□ -1.12
LMO3-225ENST00000541295 MMP14P50281 582 aa8.02□□□□□ -1.12
LMO3-225ENST00000541295 CHIC2Q9UKJ5 165 aa8.02□□□□□ -1.12
LMO3-225ENST00000541295 CCDC18Q5T9S5 1454 aa8.02□□□□□ -1.12
LMO3-225ENST00000541295 FGD6Q6ZV73 1430 aa8.02□□□□□ -1.13
LMO3-225ENST00000541295 CHD1O14646 1710 aa8.02□□□□□ -1.13
LMO3-225ENST00000541295 MAGI3Q5TCQ9 1506 aa8.02□□□□□ -1.13
LMO3-225ENST00000541295 EHBP1L1Q8N3D4 1523 aa8.02□□□□□ -1.13
LMO3-225ENST00000541295 PRG4Q92954 1404 aaPredicted RBP8.01□□□□□ -1.13
LMO3-225ENST00000541295 DNTTIP2Q5QJE6 756 aaKnown RBP8.01□□□□□ -1.13
LMO3-225ENST00000541295 NOP58Q9Y2X3 529 aaKnown RBP8.01□□□□□ -1.13
LMO3-225ENST00000541295 LAS1LQ9Y4W2 734 aaKnown RBP8.01□□□□□ -1.13
LMO3-225ENST00000541295 RAB3GAP2Q9H2M9 1393 aa8.01□□□□□ -1.13
LMO3-225ENST00000541295 SUPT6HQ7KZ85 1726 aaKnown RBP8□□□□□ -1.13
LMO3-225ENST00000541295 PDCL3Q9H2J4 239 aa8□□□□□ -1.13
LMO3-225ENST00000541295 ZNF777Q9ULD5 760 aaPredicted RBP8□□□□□ -1.13
LMO3-225ENST00000541295 MAPK8IP2Q13387 824 aaPredicted RBP8□□□□□ -1.13
LMO3-225ENST00000541295 RAPGEF6Q8TEU7 1601 aa8□□□□□ -1.13
LMO3-225ENST00000541295 MYOM3Q5VTT5 1437 aa8□□□□□ -1.13
LMO3-225ENST00000541295 NUP153P49790 1475 aaKnown RBP8□□□□□ -1.13
LMO3-225ENST00000541295 MYCNP04198 464 aaPredicted RBP7.99□□□□□ -1.13
LMO3-225ENST00000541295 CASC1Q6TDU7 716 aa7.99□□□□□ -1.13
LMO3-225ENST00000541295 CEP120Q8N960 986 aa7.99□□□□□ -1.13
LMO3-225ENST00000541295 TAF3Q5VWG9 929 aa7.99□□□□□ -1.13
LMO3-225ENST00000541295 DHX57Q6P158 1386 aaKnown RBP7.99□□□□□ -1.13
LMO3-225ENST00000541295 ZBTB22O15209 634 aa7.99□□□□□ -1.13
LMO3-225ENST00000541295 EXOC8Q8IYI6 725 aa7.98□□□□□ -1.13
LMO3-225ENST00000541295 TMTC2Q8N394 836 aa7.98□□□□□ -1.13
LMO3-225ENST00000541295 RRP7BPQ9NSQ0 103 aa7.98□□□□□ -1.13
LMO3-225ENST00000541295 PTPRGP23470 1445 aa7.98□□□□□ -1.13
LMO3-225ENST00000541295 TTC36A6NLP5 189 aa7.98□□□□□ -1.13
LMO3-225ENST00000541295 SETD5Q9C0A6 1442 aa7.98□□□□□ -1.13
LMO3-225ENST00000541295 VGLL3A8MV65 326 aa7.97□□□□□ -1.13
LMO3-225ENST00000541295 NBPF20Q3BBV1 942 aa7.97□□□□□ -1.13
LMO3-225ENST00000541295 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.14
LMO3-225ENST00000541295 TMEM51Q9NW97 253 aa7.96□□□□□ -1.14
LMO3-225ENST00000541295 ZNF644Q9H582 1327 aaPredicted RBP7.96□□□□□ -1.14
LMO3-225ENST00000541295 E9PSI1 815 aa7.95□□□□□ -1.14
LMO3-225ENST00000541295 NBPF11Q86T75 865 aa7.95□□□□□ -1.14
LMO3-225ENST00000541295 PTPN23Q9H3S7 1636 aa7.95□□□□□ -1.14
LMO3-225ENST00000541295 CFDP1Q9UEE9 299 aaPredicted RBP7.95□□□□□ -1.14
LMO3-225ENST00000541295 AEBP1Q8IUX7 1158 aa7.94□□□□□ -1.14
LMO3-225ENST00000541295 TRIM52Q96A61 297 aa7.94□□□□□ -1.14
LMO3-225ENST00000541295 PTPRKQ15262 1439 aa7.94□□□□□ -1.14
LMO3-225ENST00000541295 ERCC6L2Q5T890 1561 aa7.94□□□□□ -1.14
LMO3-225ENST00000541295 TRHP20396 242 aaPredicted RBP7.94□□□□□ -1.14
LMO3-225ENST00000541295 TROQ12816 1431 aaPredicted RBP7.93□□□□□ -1.14
LMO3-225ENST00000541295 RALBP1Q15311 655 aa7.93□□□□□ -1.14
LMO3-225ENST00000541295 FOXD4L6Q3SYB3 417 aaPredicted RBP7.93□□□□□ -1.14
LMO3-225ENST00000541295 HSP90AB3PQ58FF7 597 aa7.93□□□□□ -1.14
LMO3-225ENST00000541295 FOXD4L3Q6VB84 417 aaPredicted RBP7.93□□□□□ -1.14
LMO3-225ENST00000541295 SMAP1Q8IYB5 467 aaPredicted RBP7.93□□□□□ -1.14
LMO3-225ENST00000541295 KCNH8Q96L42 1107 aa7.93□□□□□ -1.14
LMO3-225ENST00000541295 PNNQ9H307 717 aaKnown RBP7.93□□□□□ -1.14
LMO3-225ENST00000541295 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
LMO3-225ENST00000541295 TCERG1O14776 1098 aaKnown RBP7.93□□□□□ -1.14
LMO3-225ENST00000541295 SSR1P43307 286 aaKnown RBP7.92□□□□□ -1.14
LMO3-225ENST00000541295 NOL8Q76FK4 1167 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms