RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 STAG3Q9UJ98 1225 aa7.11□□□□□ -1.27
PROM1-220ENST00000540805 ANKRD30BQ9BXX2 1392 aa7.11□□□□□ -1.27
PROM1-220ENST00000540805 PLXNC1O60486 1568 aa7.11□□□□□ -1.27
PROM1-220ENST00000540805 RRP7BPQ9NSQ0 103 aa7.11□□□□□ -1.27
PROM1-220ENST00000540805 CHIC2Q9UKJ5 165 aa7.1□□□□□ -1.27
PROM1-220ENST00000540805 UNC13BO14795 1591 aa7.1□□□□□ -1.27
PROM1-220ENST00000540805 SYCP2Q9BX26 1530 aa7.1□□□□□ -1.27
PROM1-220ENST00000540805 ABCA9Q8IUA7 1624 aa7.1□□□□□ -1.27
PROM1-220ENST00000540805 C11orf95C9JLR9 678 aaPredicted RBP7.1□□□□□ -1.27
PROM1-220ENST00000540805 RPRD2Q5VT52 1461 aaKnown RBP7.09□□□□□ -1.27
PROM1-220ENST00000540805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
PROM1-220ENST00000540805 NOP58Q9Y2X3 529 aaKnown RBP7.09□□□□□ -1.27
PROM1-220ENST00000540805 ABCC1P33527 1531 aa7.09□□□□□ -1.28
PROM1-220ENST00000540805 MAGI2Q86UL8 1455 aa7.08□□□□□ -1.28
PROM1-220ENST00000540805 C9orf84Q5VXU9 1444 aa7.08□□□□□ -1.28
PROM1-220ENST00000540805 LAS1LQ9Y4W2 734 aaKnown RBP7.08□□□□□ -1.28
PROM1-220ENST00000540805 ARAP3Q8WWN8 1544 aa7.08□□□□□ -1.28
PROM1-220ENST00000540805 POLR1AO95602 1720 aaPredicted RBP7.07□□□□□ -1.28
PROM1-220ENST00000540805 MPHOSPH9Q99550 1183 aa7.07□□□□□ -1.28
PROM1-220ENST00000540805 DAXXQ9UER7 740 aaPredicted RBP7.07□□□□□ -1.28
PROM1-220ENST00000540805 GLI2P10070 1586 aa7.07□□□□□ -1.28
PROM1-220ENST00000540805 CFDP1Q9UEE9 299 aaPredicted RBP7.06□□□□□ -1.28
PROM1-220ENST00000540805 CCDC141Q6ZP82 1450 aa7.06□□□□□ -1.28
PROM1-220ENST00000540805 DEPDC5O75140 1603 aa7.06□□□□□ -1.28
PROM1-220ENST00000540805 KIAA1107Q9UPP5 1409 aa7.06□□□□□ -1.28
PROM1-220ENST00000540805 IQGAP3Q86VI3 1631 aa7.06□□□□□ -1.28
PROM1-220ENST00000540805 PLCH2O75038 1416 aa7.06□□□□□ -1.28
PROM1-220ENST00000540805 SPATA31E1Q6ZUB1 1445 aa7.05□□□□□ -1.28
PROM1-220ENST00000540805 INO80Q9ULG1 1556 aaPredicted RBP7.05□□□□□ -1.28
PROM1-220ENST00000540805 FOXD1Q16676 465 aa7.05□□□□□ -1.28
PROM1-220ENST00000540805 CNTLNQ9NXG0 1405 aa7.05□□□□□ -1.28
PROM1-220ENST00000540805 PLEKHD1A6NEE1 506 aa7.05□□□□□ -1.28
PROM1-220ENST00000540805 ANKRD50Q9ULJ7 1429 aa7.05□□□□□ -1.28
PROM1-220ENST00000540805 A0A0G2JS52 829 aa7.04□□□□□ -1.28
PROM1-220ENST00000540805 ZFYVE16Q7Z3T8 1539 aa7.04□□□□□ -1.28
PROM1-220ENST00000540805 ARHGAP5Q13017 1502 aa7.04□□□□□ -1.28
PROM1-220ENST00000540805 PLA2R1Q13018 1463 aa7.04□□□□□ -1.28
PROM1-220ENST00000540805 WASHC2AQ641Q2 1341 aa7.04□□□□□ -1.28
PROM1-220ENST00000540805 ZBED9Q6R2W3 1325 aa7.04□□□□□ -1.28
PROM1-220ENST00000540805 RTL5Q5HYW3 569 aaPredicted RBP7.04□□□□□ -1.28
PROM1-220ENST00000540805 NPM2Q86SE8 214 aaKnown RBP7.04□□□□□ -1.28
PROM1-220ENST00000540805 ADGRL1O94910 1474 aa7.04□□□□□ -1.28
PROM1-220ENST00000540805 HSPA5P11021 654 aaKnown RBP7.04□□□□□ -1.28
PROM1-220ENST00000540805 MROH1Q8NDA8 1641 aa7.03□□□□□ -1.28
PROM1-220ENST00000540805 FAM135AQ9P2D6 1515 aa7.03□□□□□ -1.28
PROM1-220ENST00000540805 WDR7Q9Y4E6 1490 aa7.03□□□□□ -1.28
PROM1-220ENST00000540805 BCORL1Q5H9F3 1711 aa7.03□□□□□ -1.28
PROM1-220ENST00000540805 ANP32AP39687 249 aaKnown RBP7.03□□□□□ -1.28
PROM1-220ENST00000540805 FAM9BQ8IZU0 186 aa7.03□□□□□ -1.28
PROM1-220ENST00000540805 VWDEQ8N2E2 1590 aa7.02□□□□□ -1.29
PROM1-220ENST00000540805 HNRNPMP52272 730 aaKnown RBP eCLIP7.02□□□□□ -1.29
PROM1-220ENST00000540805 TRAPPC8Q9Y2L5 1435 aa7.02□□□□□ -1.29
PROM1-220ENST00000540805 ANKRD30AQ9BXX3 1397 aa7.02□□□□□ -1.29
PROM1-220ENST00000540805 MRS2Q9HD23 443 aa7.02□□□□□ -1.29
PROM1-220ENST00000540805 EIF4G2P78344 907 aaKnown RBP eCLIP7.02□□□□□ -1.29
PROM1-220ENST00000540805 CCDC184Q52MB2 194 aa7.01□□□□□ -1.29
PROM1-220ENST00000540805 FBXO41Q8TF61 875 aa7.01□□□□□ -1.29
PROM1-220ENST00000540805 KDM5CP41229 1560 aa7.01□□□□□ -1.29
PROM1-220ENST00000540805 NBPF8Q3BBV2 869 aa7.01□□□□□ -1.29
PROM1-220ENST00000540805 PODXL2Q9NZ53 605 aa7.01□□□□□ -1.29
PROM1-220ENST00000540805 KIF15Q9NS87 1388 aa7.01□□□□□ -1.29
PROM1-220ENST00000540805 E9PCH4 1651 aa7.01□□□□□ -1.29
PROM1-220ENST00000540805 KIDINS220Q9ULH0 1771 aa7.01□□□□□ -1.29
PROM1-220ENST00000540805 MAP3K4Q9Y6R4 1608 aa7□□□□□ -1.29
PROM1-220ENST00000540805 VSIG10Q8N0Z9 540 aa7□□□□□ -1.29
PROM1-220ENST00000540805 PRKRIP1Q9H875 184 aaPredicted RBP7□□□□□ -1.29
PROM1-220ENST00000540805 IPO9Q96P70 1041 aaKnown RBP7□□□□□ -1.29
PROM1-220ENST00000540805 ZMYND15Q9H091 742 aa7□□□□□ -1.29
PROM1-220ENST00000540805 DUOX2Q9NRD8 1548 aa7□□□□□ -1.29
PROM1-220ENST00000540805 UHRF1BP1Q6BDS2 1440 aa7□□□□□ -1.29
PROM1-220ENST00000540805 ATP10AO60312 1499 aa7□□□□□ -1.29
PROM1-220ENST00000540805 ZBTB47Q9UFB7 747 aaPredicted RBP7□□□□□ -1.29
PROM1-220ENST00000540805 L3MBTL2Q969R5 705 aa6.99□□□□□ -1.29
PROM1-220ENST00000540805 KDM2AQ9Y2K7 1162 aa6.99□□□□□ -1.29
PROM1-220ENST00000540805 PLEKHH2Q8IVE3 1493 aa6.99□□□□□ -1.29
PROM1-220ENST00000540805 NEFMP07197 916 aa6.99□□□□□ -1.29
PROM1-220ENST00000540805 TRPM1Q7Z4N2 1603 aa6.99□□□□□ -1.29
PROM1-220ENST00000540805 CCDC7Q96M83 1385 aa6.99□□□□□ -1.29
PROM1-220ENST00000540805 ASXL2Q76L83 1435 aa6.99□□□□□ -1.29
PROM1-220ENST00000540805 FRMPD1Q5SYB0 1578 aa6.98□□□□□ -1.29
PROM1-220ENST00000540805 ERBINQ96RT1 1412 aa6.98□□□□□ -1.29
PROM1-220ENST00000540805 A0A0U1RQG5 324 aaPredicted RBP6.98□□□□□ -1.29
PROM1-220ENST00000540805 ARID4BQ4LE39 1312 aaPredicted RBP6.98□□□□□ -1.29
PROM1-220ENST00000540805 SMG6Q86US8 1419 aaKnown RBP6.98□□□□□ -1.29
PROM1-220ENST00000540805 EIF2AK4Q9P2K8 1649 aaKnown RBP6.98□□□□□ -1.29
PROM1-220ENST00000540805 RTEL1-TNFRSF6BF6WH68 1400 aa6.97□□□□□ -1.29
PROM1-220ENST00000540805 PRDM15P57071 1507 aaPredicted RBP6.97□□□□□ -1.29
PROM1-220ENST00000540805 RNF17Q9BXT8 1623 aaKnown RBP6.96□□□□□ -1.29
PROM1-220ENST00000540805 CEP152O94986 1710 aa6.96□□□□□ -1.29
PROM1-220ENST00000540805 TSPY4P0CV99 314 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 TSPY10P0CW01 314 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 SKAP1Q86WV1 359 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 NUDCQ9Y266 331 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 ATP7AQ04656 1500 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 ZBTB7CA1YPR0 619 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 FANCAO15360 1455 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 SPHKAPQ2M3C7 1700 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 LAMC1P11047 1609 aa6.96□□□□□ -1.3
PROM1-220ENST00000540805 RALGAPBQ86X10 1494 aa6.95□□□□□ -1.3
PROM1-220ENST00000540805 SLC4A3P48751 1232 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms