RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 IQGAP3Q86VI3 1631 aa35.4■■■■□ 3.26
TTC3-225ENST00000540756 HECW2Q9P2P5 1572 aa35.39■■■■□ 3.26
TTC3-225ENST00000540756 MLH3Q9UHC1 1453 aa35.39■■■■□ 3.26
TTC3-225ENST00000540756 DHX29Q7Z478 1369 aaKnown RBP35.39■■■■□ 3.26
TTC3-225ENST00000540756 RICTORQ6R327 1708 aa35.39■■■■□ 3.26
TTC3-225ENST00000540756 KIF3BO15066 747 aa35.35■■■■□ 3.25
TTC3-225ENST00000540756 ABCA6Q8N139 1617 aa35.33■■■■□ 3.25
TTC3-225ENST00000540756 L3MBTL2Q969R5 705 aa35.32■■■■□ 3.24
TTC3-225ENST00000540756 DEPDC5O75140 1603 aa35.31■■■■□ 3.24
TTC3-225ENST00000540756 FRMPD1Q5SYB0 1578 aa35.31■■■■□ 3.24
TTC3-225ENST00000540756 A2MP01023 1474 aa35.31■■■■□ 3.24
TTC3-225ENST00000540756 EIF2AK4Q9P2K8 1649 aaKnown RBP35.27■■■■□ 3.24
TTC3-225ENST00000540756 TEX14Q8IWB6 1497 aa35.26■■■■□ 3.24
TTC3-225ENST00000540756 MROH1Q8NDA8 1641 aa35.24■■■■□ 3.23
TTC3-225ENST00000540756 YEATS2Q9ULM3 1422 aa35.23■■■■□ 3.23
TTC3-225ENST00000540756 PLA2R1Q13018 1463 aa35.22■■■■□ 3.23
TTC3-225ENST00000540756 DIP2CQ9Y2E4 1556 aa35.22■■■■□ 3.23
TTC3-225ENST00000540756 VWDEQ8N2E2 1590 aa35.18■■■■□ 3.22
TTC3-225ENST00000540756 PRDM15P57071 1507 aaPredicted RBP35.17■■■■□ 3.22
TTC3-225ENST00000540756 E9PCH4 1651 aa35.16■■■■□ 3.22
TTC3-225ENST00000540756 COL17A1Q9UMD9 1497 aaPredicted RBP35.15■■■■□ 3.22
TTC3-225ENST00000540756 KANK1Q14678 1352 aa35.13■■■■□ 3.21
TTC3-225ENST00000540756 ZMYM4Q5VZL5 1548 aa35.12■■■■□ 3.21
TTC3-225ENST00000540756 RNF17Q9BXT8 1623 aaKnown RBP35.11■■■■□ 3.21
TTC3-225ENST00000540756 DIEXFQ68CQ4 756 aaKnown RBP35.1■■■■□ 3.21
TTC3-225ENST00000540756 GGT6Q6P531 493 aa35.1■■■■□ 3.21
TTC3-225ENST00000540756 TET3O43151 1660 aa35.1■■■■□ 3.21
TTC3-225ENST00000540756 NBPF8Q3BBV2 869 aa35.09■■■■□ 3.21
TTC3-225ENST00000540756 CCDC144AA2RUR9 1427 aa35.09■■■■□ 3.21
TTC3-225ENST00000540756 DNAJC5Q9H3Z4 198 aa35.06■■■■□ 3.2
TTC3-225ENST00000540756 BCORL1Q5H9F3 1711 aa35.06■■■■□ 3.2
TTC3-225ENST00000540756 CEP152O94986 1710 aa35.05■■■■□ 3.2
TTC3-225ENST00000540756 HIRIP3Q9BW71 556 aaPredicted RBP35.05■■■■□ 3.2
TTC3-225ENST00000540756 ATP10AO60312 1499 aa35.04■■■■□ 3.2
TTC3-225ENST00000540756 SPHKAPQ2M3C7 1700 aa34.98■■■■□ 3.19
TTC3-225ENST00000540756 EFCAB6Q5THR3 1501 aa34.96■■■■□ 3.19
TTC3-225ENST00000540756 RGL3Q3MIN7 710 aa34.96■■■■□ 3.19
TTC3-225ENST00000540756 PTPRTO14522 1441 aa34.95■■■■□ 3.19
TTC3-225ENST00000540756 LMTK2Q8IWU2 1503 aa34.95■■■■□ 3.19
TTC3-225ENST00000540756 ZNF326Q5BKZ1 582 aaKnown RBP34.94■■■■□ 3.18
TTC3-225ENST00000540756 TRHP20396 242 aaPredicted RBP34.94■■■■□ 3.18
TTC3-225ENST00000540756 KDM2AQ9Y2K7 1162 aa34.94■■■■□ 3.18
TTC3-225ENST00000540756 TRPM2O94759 1503 aa34.93■■■■□ 3.18
TTC3-225ENST00000540756 DCAF11Q8TEB1 546 aa34.93■■■■□ 3.18
TTC3-225ENST00000540756 WASHC2CQ9Y4E1 1318 aa34.92■■■■□ 3.18
TTC3-225ENST00000540756 CFAP65Q6ZU64 1925 aaKnown RBP34.91■■■■□ 3.18
TTC3-225ENST00000540756 ABCC3O15438 1527 aa34.91■■■■□ 3.18
TTC3-225ENST00000540756 SIGLEC1Q9BZZ2 1709 aa34.89■■■■□ 3.18
TTC3-225ENST00000540756 CLTCL1P53675 1640 aa34.88■■■■□ 3.17
TTC3-225ENST00000540756 NPATQ14207 1427 aa34.85■■■■□ 3.17
TTC3-225ENST00000540756 UGGT1Q9NYU2 1555 aa34.85■■■■□ 3.17
TTC3-225ENST00000540756 UHRF1BP1Q6BDS2 1440 aa34.82■■■■□ 3.16
TTC3-225ENST00000540756 SPATA31E1Q6ZUB1 1445 aa34.82■■■■□ 3.16
TTC3-225ENST00000540756 CAMSAP1Q5T5Y3 1602 aa34.81■■■■□ 3.16
TTC3-225ENST00000540756 ARHGEF40Q8TER5 1519 aa34.81■■■■□ 3.16
TTC3-225ENST00000540756 REREQ9P2R6 1566 aa34.8■■■■□ 3.16
TTC3-225ENST00000540756 HSPA5P11021 654 aaKnown RBP34.8■■■■□ 3.16
TTC3-225ENST00000540756 AGLP35573 1532 aa34.74■■■■□ 3.15
TTC3-225ENST00000540756 EIF4G2P78344 907 aaKnown RBP eCLIP34.74■■■■□ 3.153e-6■■■□□ 15.8
TTC3-225ENST00000540756 ZC3H13Q5T200 1668 aaKnown RBP34.72■■■■□ 3.15
TTC3-225ENST00000540756 PRAG1Q86YV5 1406 aa34.71■■■■□ 3.15
TTC3-225ENST00000540756 MLECQ14165 292 aa34.71■■■■□ 3.15
TTC3-225ENST00000540756 RALGAPBQ86X10 1494 aa34.69■■■■□ 3.14
TTC3-225ENST00000540756 KIF1BO60333 1816 aa34.65■■■■□ 3.14
TTC3-225ENST00000540756 ARHGAP31Q2M1Z3 1444 aa34.63■■■■□ 3.14
TTC3-225ENST00000540756 DDX10Q13206 875 aaKnown RBP34.63■■■■□ 3.13
TTC3-225ENST00000540756 MIER1Q8N108 512 aa34.63■■■■□ 3.13
TTC3-225ENST00000540756 NOS1P29475 1434 aa34.63■■■■□ 3.13
TTC3-225ENST00000540756 CNTLNQ9NXG0 1405 aa34.63■■■■□ 3.13
TTC3-225ENST00000540756 MROH2AA6NES4 1674 aa34.63■■■■□ 3.13
TTC3-225ENST00000540756 TRPM1Q7Z4N2 1603 aa34.62■■■■□ 3.13
TTC3-225ENST00000540756 SYNMO15061 1565 aa34.61■■■■□ 3.13
TTC3-225ENST00000540756 NBPF1Q3BBV0 1214 aa34.59■■■■□ 3.13
TTC3-225ENST00000540756 CARD11Q9BXL7 1154 aa34.59■■■■□ 3.13
TTC3-225ENST00000540756 CLTCQ00610 1675 aaKnown RBP34.59■■■■□ 3.13
TTC3-225ENST00000540756 USP47Q96K76 1375 aa34.58■■■■□ 3.13
TTC3-225ENST00000540756 CHGAP10645 457 aaKnown RBP34.57■■■■□ 3.12
TTC3-225ENST00000540756 ROCK2O75116 1388 aaKnown RBP34.56■■■■□ 3.12
TTC3-225ENST00000540756 C11orf95C9JLR9 678 aaPredicted RBP34.56■■■■□ 3.12
TTC3-225ENST00000540756 FBXO31Q5XUX0 539 aaPredicted RBP34.56■■■■□ 3.12
TTC3-225ENST00000540756 NEURL4Q96JN8 1562 aa34.55■■■■□ 3.12
TTC3-225ENST00000540756 ARID4BQ4LE39 1312 aaPredicted RBP34.55■■■■□ 3.12
TTC3-225ENST00000540756 PREX1Q8TCU6 1659 aa34.54■■■■□ 3.12
TTC3-225ENST00000540756 PPP6R1Q9UPN7 881 aa34.53■■■■□ 3.12
TTC3-225ENST00000540756 WASHC2AQ641Q2 1341 aa34.53■■■■□ 3.12
TTC3-225ENST00000540756 ADGRB3O60242 1522 aa34.53■■■■□ 3.12
TTC3-225ENST00000540756 MADDQ8WXG6 1647 aa34.53■■■■□ 3.12
TTC3-225ENST00000540756 PIK3C2BO00750 1634 aa34.52■■■■□ 3.12
TTC3-225ENST00000540756 IDI1Q13907 227 aa34.48■■■■□ 3.11
TTC3-225ENST00000540756 IFT172Q9UG01 1749 aa34.47■■■■□ 3.11
TTC3-225ENST00000540756 ADGRF5Q8IZF2 1346 aa34.44■■■■□ 3.1
TTC3-225ENST00000540756 ERVK-7P63135 1459 aa34.44■■■■□ 3.1
TTC3-225ENST00000540756 GPRASP1Q5JY77 1395 aa34.43■■■■□ 3.1
TTC3-225ENST00000540756 ST20-MTHFSA0A0A6YYL1 179 aa34.41■■■■□ 3.1
TTC3-225ENST00000540756 STAC3Q96MF2 364 aa34.4■■■■□ 3.1
TTC3-225ENST00000540756 SLC52A1Q9NWF4 448 aa34.39■■■■□ 3.1
TTC3-225ENST00000540756 CCDC7Q96M83 1385 aa34.39■■■■□ 3.1
TTC3-225ENST00000540756 MYOM2P54296 1465 aa34.39■■■■□ 3.1
TTC3-225ENST00000540756 PPLO60437 1756 aa34.38■■■■□ 3.09
TTC3-225ENST00000540756 MYO5BQ9ULV0 1848 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms