RNA–Protein interactions for RNA: ENST00000540712.1

LRR1-203, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,597 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-203ENST00000540712 PTPRMP28827 1452 aa23.02■■□□□ 1.27
LRR1-203ENST00000540712 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
LRR1-203ENST00000540712 ANKRD50Q9ULJ7 1429 aa23■■□□□ 1.27
LRR1-203ENST00000540712 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
LRR1-203ENST00000540712 WASHC2CQ9Y4E1 1318 aa22.98■■□□□ 1.27
LRR1-203ENST00000540712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.95■■□□□ 1.26
LRR1-203ENST00000540712 RNF17Q9BXT8 1623 aaKnown RBP22.94■■□□□ 1.26
LRR1-203ENST00000540712 KANK1Q14678 1352 aa22.94■■□□□ 1.26
LRR1-203ENST00000540712 FAM135AQ9P2D6 1515 aa22.93■■□□□ 1.26
LRR1-203ENST00000540712 KDM5DQ9BY66 1539 aa22.92■■□□□ 1.26
LRR1-203ENST00000540712 CEBPAP49715 358 aaPredicted RBP22.92■■□□□ 1.26
LRR1-203ENST00000540712 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
LRR1-203ENST00000540712 CLTCQ00610 1675 aaKnown RBP22.91■■□□□ 1.26
LRR1-203ENST00000540712 MROH2AA6NES4 1674 aa22.88■■□□□ 1.25
LRR1-203ENST00000540712 PRDM15P57071 1507 aaPredicted RBP22.88■■□□□ 1.25
LRR1-203ENST00000540712 HFM1A2PYH4 1435 aa22.87■■□□□ 1.25
LRR1-203ENST00000540712 NAIPQ13075 1403 aa22.87■■□□□ 1.25
LRR1-203ENST00000540712 MROH1Q8NDA8 1641 aa22.87■■□□□ 1.25
LRR1-203ENST00000540712 DEPDC5O75140 1603 aa22.86■■□□□ 1.25
LRR1-203ENST00000540712 ABCC3O15438 1527 aa22.85■■□□□ 1.25
LRR1-203ENST00000540712 ZC3H13Q5T200 1668 aaKnown RBP22.85■■□□□ 1.25
LRR1-203ENST00000540712 C3P01024 1663 aa22.84■■□□□ 1.25
LRR1-203ENST00000540712 GCC2Q8IWJ2 1684 aa22.82■■□□□ 1.24
LRR1-203ENST00000540712 ILDR1Q86SU0 546 aaPredicted RBP22.8■■□□□ 1.24
LRR1-203ENST00000540712 NUP155O75694 1391 aa22.8■■□□□ 1.24
LRR1-203ENST00000540712 NPATQ14207 1427 aa22.79■■□□□ 1.24
LRR1-203ENST00000540712 UNC13BO14795 1591 aa22.79■■□□□ 1.24
LRR1-203ENST00000540712 CEP152O94986 1710 aa22.78■■□□□ 1.24
LRR1-203ENST00000540712 PZPP20742 1482 aa22.78■■□□□ 1.24
LRR1-203ENST00000540712 VWDEQ8N2E2 1590 aa22.77■■□□□ 1.24
LRR1-203ENST00000540712 TRIM52Q96A61 297 aa22.76■■□□□ 1.23
LRR1-203ENST00000540712 LMTK2Q8IWU2 1503 aa22.76■■□□□ 1.23
LRR1-203ENST00000540712 CAMSAP1Q5T5Y3 1602 aa22.76■■□□□ 1.23
LRR1-203ENST00000540712 FBXO31Q5XUX0 539 aaPredicted RBP22.75■■□□□ 1.23
LRR1-203ENST00000540712 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
LRR1-203ENST00000540712 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
LRR1-203ENST00000540712 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
LRR1-203ENST00000540712 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
LRR1-203ENST00000540712 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
LRR1-203ENST00000540712 SETD1BQ9UPS6 1966 aaKnown RBP22.72■■□□□ 1.23
LRR1-203ENST00000540712 TNRQ92752 1358 aa22.71■■□□□ 1.23
LRR1-203ENST00000540712 IQGAP3Q86VI3 1631 aa22.7■■□□□ 1.22
LRR1-203ENST00000540712 TRIM26Q12899 539 aaPredicted RBP22.7■■□□□ 1.22
LRR1-203ENST00000540712 PREX1Q8TCU6 1659 aa22.69■■□□□ 1.22
LRR1-203ENST00000540712 EFCAB6Q5THR3 1501 aa22.69■■□□□ 1.22
LRR1-203ENST00000540712 TET3O43151 1660 aa22.68■■□□□ 1.22
LRR1-203ENST00000540712 ERVK-7P63135 1459 aa22.67■■□□□ 1.22
LRR1-203ENST00000540712 HSPA2P54652 639 aa22.67■■□□□ 1.22
LRR1-203ENST00000540712 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
LRR1-203ENST00000540712 SPATA31D1Q6ZQQ2 1576 aa22.65■■□□□ 1.22
LRR1-203ENST00000540712 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
LRR1-203ENST00000540712 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.22
LRR1-203ENST00000540712 CFAP65Q6ZU64 1925 aaKnown RBP22.62■■□□□ 1.21
LRR1-203ENST00000540712 MYO3AQ8NEV4 1616 aa22.62■■□□□ 1.21
LRR1-203ENST00000540712 NLRP1Q9C000 1473 aa22.62■■□□□ 1.21
LRR1-203ENST00000540712 HRCP23327 699 aa22.59■■□□□ 1.21
LRR1-203ENST00000540712 A2ML1A8K2U0 1454 aa22.59■■□□□ 1.21
LRR1-203ENST00000540712 NOS1P29475 1434 aa22.58■■□□□ 1.21
LRR1-203ENST00000540712 CEP170BQ9Y4F5 1589 aaPredicted RBP22.58■■□□□ 1.21
LRR1-203ENST00000540712 E9PCH4 1651 aa22.58■■□□□ 1.2
LRR1-203ENST00000540712 PKD2Q13563 968 aa22.58■■□□□ 1.2
LRR1-203ENST00000540712 SLC52A1Q9NWF4 448 aa22.57■■□□□ 1.2
LRR1-203ENST00000540712 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
LRR1-203ENST00000540712 STAG3Q9UJ98 1225 aa22.56■■□□□ 1.2
LRR1-203ENST00000540712 ZNF142P52746 1687 aaPredicted RBP22.55■■□□□ 1.2
LRR1-203ENST00000540712 THEMISQ8N1K5 641 aaPredicted RBP22.55■■□□□ 1.2
LRR1-203ENST00000540712 UGGT1Q9NYU2 1555 aa22.53■■□□□ 1.2
LRR1-203ENST00000540712 IDI1Q13907 227 aa22.53■■□□□ 1.2
LRR1-203ENST00000540712 SYNMO15061 1565 aa22.52■■□□□ 1.2
LRR1-203ENST00000540712 PTPRTO14522 1441 aa22.48■■□□□ 1.19
LRR1-203ENST00000540712 CHGAP10645 457 aaKnown RBP22.46■■□□□ 1.19
LRR1-203ENST00000540712 FOXD1Q16676 465 aa22.46■■□□□ 1.19
LRR1-203ENST00000540712 SPHKAPQ2M3C7 1700 aa22.46■■□□□ 1.19
LRR1-203ENST00000540712 PLA2R1Q13018 1463 aa22.46■■□□□ 1.19
LRR1-203ENST00000540712 PIK3C2BO00750 1634 aa22.45■■□□□ 1.18
LRR1-203ENST00000540712 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
LRR1-203ENST00000540712 ANKLE2Q86XL3 938 aa22.43■■□□□ 1.18
LRR1-203ENST00000540712 FBXO41Q8TF61 875 aa22.43■■□□□ 1.18
LRR1-203ENST00000540712 TRPM2O94759 1503 aa22.43■■□□□ 1.18
LRR1-203ENST00000540712 UBR1Q8IWV7 1749 aa22.43■■□□□ 1.18
LRR1-203ENST00000540712 ADGRB3O60242 1522 aa22.42■■□□□ 1.18
LRR1-203ENST00000540712 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
LRR1-203ENST00000540712 EID1Q9Y6B2 187 aa22.41■■□□□ 1.18
LRR1-203ENST00000540712 KDM5AP29375 1690 aaKnown RBP22.4■■□□□ 1.18
LRR1-203ENST00000540712 STRCQ7RTU9 1775 aa22.39■■□□□ 1.18
LRR1-203ENST00000540712 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.18
LRR1-203ENST00000540712 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
LRR1-203ENST00000540712 HDGFP51858 240 aaKnown RBP22.38■■□□□ 1.17
LRR1-203ENST00000540712 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
LRR1-203ENST00000540712 TXNDC2Q86VQ3 553 aa22.37■■□□□ 1.17
LRR1-203ENST00000540712 ZNF326Q5BKZ1 582 aaKnown RBP22.35■■□□□ 1.17
LRR1-203ENST00000540712 SLIT1O75093 1534 aa22.35■■□□□ 1.17
LRR1-203ENST00000540712 TMEM131LA2VDJ0 1609 aa22.35■■□□□ 1.17
LRR1-203ENST00000540712 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
LRR1-203ENST00000540712 ARHGAP23Q9P227 1491 aa22.34■■□□□ 1.17
LRR1-203ENST00000540712 SCAF11Q99590 1463 aaKnown RBP22.32■■□□□ 1.16
LRR1-203ENST00000540712 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
LRR1-203ENST00000540712 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.32■■□□□ 1.16
LRR1-203ENST00000540712 LTKP29376 864 aa22.31■■□□□ 1.16
LRR1-203ENST00000540712 POLR1AO95602 1720 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms