RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
LMO3-223ENST00000540590 HRCP23327 699 aa18.65■□□□□ 0.58
LMO3-223ENST00000540590 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.58
LMO3-223ENST00000540590 MYT1LQ9UL68 1186 aa18.63■□□□□ 0.57
LMO3-223ENST00000540590 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
LMO3-223ENST00000540590 DIP2CQ9Y2E4 1556 aa18.62■□□□□ 0.57
LMO3-223ENST00000540590 RNF216Q9NWF9 866 aaPredicted RBP18.61■□□□□ 0.57
LMO3-223ENST00000540590 YEATS2Q9ULM3 1422 aa18.59■□□□□ 0.57
LMO3-223ENST00000540590 ERBINQ96RT1 1412 aa18.58■□□□□ 0.57
LMO3-223ENST00000540590 A2MP01023 1474 aa18.57■□□□□ 0.56
LMO3-223ENST00000540590 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
LMO3-223ENST00000540590 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
LMO3-223ENST00000540590 ARHGEF40Q8TER5 1519 aa18.55■□□□□ 0.56
LMO3-223ENST00000540590 UNC13BO14795 1591 aa18.55■□□□□ 0.56
LMO3-223ENST00000540590 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
LMO3-223ENST00000540590 BCORL1Q5H9F3 1711 aa18.53■□□□□ 0.56
LMO3-223ENST00000540590 DHX57Q6P158 1386 aaKnown RBP18.52■□□□□ 0.55
LMO3-223ENST00000540590 ATP10AO60312 1499 aa18.52■□□□□ 0.55
LMO3-223ENST00000540590 DEPDC5O75140 1603 aa18.51■□□□□ 0.55
LMO3-223ENST00000540590 KDM5DQ9BY66 1539 aa18.5■□□□□ 0.55
LMO3-223ENST00000540590 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
LMO3-223ENST00000540590 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
LMO3-223ENST00000540590 SIGLEC1Q9BZZ2 1709 aa18.48■□□□□ 0.55
LMO3-223ENST00000540590 MROH1Q8NDA8 1641 aa18.48■□□□□ 0.55
LMO3-223ENST00000540590 PZPP20742 1482 aa18.46■□□□□ 0.55
LMO3-223ENST00000540590 IQGAP3Q86VI3 1631 aa18.46■□□□□ 0.55
LMO3-223ENST00000540590 PRDM15P57071 1507 aaPredicted RBP18.45■□□□□ 0.54
LMO3-223ENST00000540590 KIF3BO15066 747 aa18.45■□□□□ 0.54
LMO3-223ENST00000540590 CCER1Q8TC90 406 aaPredicted RBP18.45■□□□□ 0.54
LMO3-223ENST00000540590 AGLP35573 1532 aa18.44■□□□□ 0.54
LMO3-223ENST00000540590 NUP155O75694 1391 aa18.44■□□□□ 0.54
LMO3-223ENST00000540590 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
LMO3-223ENST00000540590 VWDEQ8N2E2 1590 aa18.42■□□□□ 0.54
LMO3-223ENST00000540590 C1QBPQ07021 282 aaKnown RBP18.41■□□□□ 0.54
LMO3-223ENST00000540590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
LMO3-223ENST00000540590 CEP152O94986 1710 aa18.4■□□□□ 0.54
LMO3-223ENST00000540590 MPHOSPH9Q99550 1183 aa18.4■□□□□ 0.54
LMO3-223ENST00000540590 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
LMO3-223ENST00000540590 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
LMO3-223ENST00000540590 TET3O43151 1660 aa18.38■□□□□ 0.53
LMO3-223ENST00000540590 KANK1Q14678 1352 aa18.37■□□□□ 0.53
LMO3-223ENST00000540590 GGT6Q6P531 493 aa18.36■□□□□ 0.53
LMO3-223ENST00000540590 ZC3H13Q5T200 1668 aaKnown RBP18.35■□□□□ 0.53
LMO3-223ENST00000540590 E9PCH4 1651 aa18.34■□□□□ 0.53
LMO3-223ENST00000540590 LMTK2Q8IWU2 1503 aa18.34■□□□□ 0.53
LMO3-223ENST00000540590 PKD2Q13563 968 aa18.33■□□□□ 0.52
LMO3-223ENST00000540590 ABCC3O15438 1527 aa18.33■□□□□ 0.52
LMO3-223ENST00000540590 CAMSAP1Q5T5Y3 1602 aa18.32■□□□□ 0.52
LMO3-223ENST00000540590 EFCAB6Q5THR3 1501 aa18.31■□□□□ 0.52
LMO3-223ENST00000540590 CLTCQ00610 1675 aaKnown RBP18.29■□□□□ 0.52
LMO3-223ENST00000540590 ARID4BQ4LE39 1312 aaPredicted RBP18.28■□□□□ 0.52
LMO3-223ENST00000540590 ANKRD30BQ9BXX2 1392 aa18.28■□□□□ 0.52
LMO3-223ENST00000540590 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
LMO3-223ENST00000540590 MLECQ14165 292 aa18.27■□□□□ 0.52
LMO3-223ENST00000540590 SPHKAPQ2M3C7 1700 aa18.26■□□□□ 0.51
LMO3-223ENST00000540590 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
LMO3-223ENST00000540590 CFAP65Q6ZU64 1925 aaKnown RBP18.25■□□□□ 0.51
LMO3-223ENST00000540590 FER1L4A9Z1Z3 1794 aa18.23■□□□□ 0.51
LMO3-223ENST00000540590 SIN3AQ96ST3 1273 aa18.23■□□□□ 0.51
LMO3-223ENST00000540590 NPATQ14207 1427 aa18.23■□□□□ 0.51
LMO3-223ENST00000540590 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
LMO3-223ENST00000540590 PLA2R1Q13018 1463 aa18.22■□□□□ 0.51
LMO3-223ENST00000540590 ARHGAP31Q2M1Z3 1444 aa18.22■□□□□ 0.51
LMO3-223ENST00000540590 MROH2AA6NES4 1674 aa18.21■□□□□ 0.51
LMO3-223ENST00000540590 TRPM2O94759 1503 aa18.2■□□□□ 0.5
LMO3-223ENST00000540590 PTPRTO14522 1441 aa18.2■□□□□ 0.5
LMO3-223ENST00000540590 PREX1Q8TCU6 1659 aa18.19■□□□□ 0.5
LMO3-223ENST00000540590 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
LMO3-223ENST00000540590 NEUROD1Q13562 356 aa18.18■□□□□ 0.5
LMO3-223ENST00000540590 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
LMO3-223ENST00000540590 ADAMTSL3P82987 1691 aa18.17■□□□□ 0.5
LMO3-223ENST00000540590 CLTCL1P53675 1640 aa18.16■□□□□ 0.5
LMO3-223ENST00000540590 MADDQ8WXG6 1647 aa18.16■□□□□ 0.5
LMO3-223ENST00000540590 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
LMO3-223ENST00000540590 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
LMO3-223ENST00000540590 NOS1P29475 1434 aa18.15■□□□□ 0.5
LMO3-223ENST00000540590 SYNMO15061 1565 aa18.14■□□□□ 0.49
LMO3-223ENST00000540590 C3P01024 1663 aa18.14■□□□□ 0.49
LMO3-223ENST00000540590 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
LMO3-223ENST00000540590 TIMELESSQ9UNS1 1208 aa18.13■□□□□ 0.49
LMO3-223ENST00000540590 ERVK-7P63135 1459 aa18.13■□□□□ 0.49
LMO3-223ENST00000540590 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
LMO3-223ENST00000540590 ZMYM3Q14202 1370 aa18.12■□□□□ 0.49
LMO3-223ENST00000540590 SPATA31D1Q6ZQQ2 1576 aa18.12■□□□□ 0.49
LMO3-223ENST00000540590 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
LMO3-223ENST00000540590 KIF1BO60333 1816 aa18.12■□□□□ 0.49
LMO3-223ENST00000540590 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
LMO3-223ENST00000540590 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
LMO3-223ENST00000540590 FBXO31Q5XUX0 539 aaPredicted RBP18.09■□□□□ 0.49
LMO3-223ENST00000540590 SPATA31E1Q6ZUB1 1445 aa18.05■□□□□ 0.48
LMO3-223ENST00000540590 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
LMO3-223ENST00000540590 MYO5BQ9ULV0 1848 aa18.03■□□□□ 0.48
LMO3-223ENST00000540590 CEBPAP49715 358 aaPredicted RBP18.03■□□□□ 0.48
LMO3-223ENST00000540590 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
LMO3-223ENST00000540590 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.48
LMO3-223ENST00000540590 TNRQ92752 1358 aa18.01■□□□□ 0.47
LMO3-223ENST00000540590 KDM5AP29375 1690 aaKnown RBP18■□□□□ 0.47
LMO3-223ENST00000540590 IDI1Q13907 227 aa18■□□□□ 0.47
LMO3-223ENST00000540590 TMEM131LA2VDJ0 1609 aa18■□□□□ 0.47
LMO3-223ENST00000540590 IFT172Q9UG01 1749 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms