RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 A2ML1A8K2U0 1454 aa19.88■□□□□ 0.77
COPS7A-211ENST00000540408 CCDC141Q6ZP82 1450 aa19.88■□□□□ 0.77
COPS7A-211ENST00000540408 SOCS7O14512 581 aa19.88■□□□□ 0.77
COPS7A-211ENST00000540408 NCOA2Q15596 1464 aa19.86■□□□□ 0.77
COPS7A-211ENST00000540408 TNRQ92752 1358 aa19.86■□□□□ 0.77
COPS7A-211ENST00000540408 FBXO31Q5XUX0 539 aaPredicted RBP19.86■□□□□ 0.77
COPS7A-211ENST00000540408 CAMSAP2Q08AD1 1489 aa19.85■□□□□ 0.77
COPS7A-211ENST00000540408 SPATA31D1Q6ZQQ2 1576 aa19.83■□□□□ 0.77
COPS7A-211ENST00000540408 ANKLE2Q86XL3 938 aa19.83■□□□□ 0.77
COPS7A-211ENST00000540408 THEMISQ8N1K5 641 aaPredicted RBP19.83■□□□□ 0.77
COPS7A-211ENST00000540408 DNMT1P26358 1616 aaKnown RBP19.83■□□□□ 0.76
COPS7A-211ENST00000540408 KDM5DQ9BY66 1539 aa19.82■□□□□ 0.76
COPS7A-211ENST00000540408 FAM135AQ9P2D6 1515 aa19.82■□□□□ 0.76
COPS7A-211ENST00000540408 PZPP20742 1482 aa19.81■□□□□ 0.76
COPS7A-211ENST00000540408 MIA2Q96PC5 1412 aa19.78■□□□□ 0.76
COPS7A-211ENST00000540408 TOM1O60784 492 aa19.78■□□□□ 0.76
COPS7A-211ENST00000540408 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
COPS7A-211ENST00000540408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.77■□□□□ 0.76
COPS7A-211ENST00000540408 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
COPS7A-211ENST00000540408 NLRP1Q9C000 1473 aa19.76■□□□□ 0.75
COPS7A-211ENST00000540408 CPS1P31327 1500 aa19.75■□□□□ 0.75
COPS7A-211ENST00000540408 PIP4K2BP78356 416 aa19.74■□□□□ 0.75
COPS7A-211ENST00000540408 POLR1AO95602 1720 aaPredicted RBP19.73■□□□□ 0.75
COPS7A-211ENST00000540408 SHANK2Q9UPX8 1470 aa19.73■□□□□ 0.75
COPS7A-211ENST00000540408 UGGT1Q9NYU2 1555 aa19.73■□□□□ 0.75
COPS7A-211ENST00000540408 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
COPS7A-211ENST00000540408 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
COPS7A-211ENST00000540408 NEURL4Q96JN8 1562 aa19.7■□□□□ 0.74
COPS7A-211ENST00000540408 NPHP4O75161 1426 aaPredicted RBP19.69■□□□□ 0.74
COPS7A-211ENST00000540408 HSPA1LP34931 641 aa19.68■□□□□ 0.74
COPS7A-211ENST00000540408 LOC105371045A0A1W2PR82 267 aa19.67■□□□□ 0.74
COPS7A-211ENST00000540408 MED14O60244 1454 aa19.67■□□□□ 0.74
COPS7A-211ENST00000540408 MAST1Q9Y2H9 1570 aa19.66■□□□□ 0.74
COPS7A-211ENST00000540408 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
COPS7A-211ENST00000540408 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
COPS7A-211ENST00000540408 ABCC3O15438 1527 aa19.65■□□□□ 0.74
COPS7A-211ENST00000540408 DEPDC5O75140 1603 aa19.65■□□□□ 0.74
COPS7A-211ENST00000540408 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
COPS7A-211ENST00000540408 ZC3H13Q5T200 1668 aaKnown RBP19.65■□□□□ 0.74
COPS7A-211ENST00000540408 APLP2Q06481 763 aa19.64■□□□□ 0.73
COPS7A-211ENST00000540408 MAP3K1Q13233 1512 aa19.64■□□□□ 0.73
COPS7A-211ENST00000540408 EIF2AK4Q9P2K8 1649 aaKnown RBP19.63■□□□□ 0.73
COPS7A-211ENST00000540408 VWDEQ8N2E2 1590 aa19.61■□□□□ 0.73
COPS7A-211ENST00000540408 DUOX2Q9NRD8 1548 aa19.61■□□□□ 0.73
COPS7A-211ENST00000540408 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
COPS7A-211ENST00000540408 IQGAP1P46940 1657 aa19.59■□□□□ 0.73
COPS7A-211ENST00000540408 RRP7BPQ9NSQ0 103 aa19.58■□□□□ 0.72
COPS7A-211ENST00000540408 EID1Q9Y6B2 187 aa19.58■□□□□ 0.72
COPS7A-211ENST00000540408 TXNDC2Q86VQ3 553 aa19.57■□□□□ 0.72
COPS7A-211ENST00000540408 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
COPS7A-211ENST00000540408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.72
COPS7A-211ENST00000540408 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
COPS7A-211ENST00000540408 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
COPS7A-211ENST00000540408 KANK1Q14678 1352 aa19.55■□□□□ 0.72
COPS7A-211ENST00000540408 MROH1Q8NDA8 1641 aa19.54■□□□□ 0.72
COPS7A-211ENST00000540408 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
COPS7A-211ENST00000540408 ARHGAP31Q2M1Z3 1444 aa19.53■□□□□ 0.72
COPS7A-211ENST00000540408 ERBINQ96RT1 1412 aa19.53■□□□□ 0.72
COPS7A-211ENST00000540408 LRRC7Q96NW7 1537 aa19.53■□□□□ 0.72
COPS7A-211ENST00000540408 CEP152O94986 1710 aa19.53■□□□□ 0.72
COPS7A-211ENST00000540408 MED1Q15648 1581 aaPredicted RBP19.53■□□□□ 0.72
COPS7A-211ENST00000540408 CFAP65Q6ZU64 1925 aaKnown RBP19.53■□□□□ 0.72
COPS7A-211ENST00000540408 LTKP29376 864 aa19.51■□□□□ 0.71
COPS7A-211ENST00000540408 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
COPS7A-211ENST00000540408 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
COPS7A-211ENST00000540408 ABCC5O15440 1437 aa19.51■□□□□ 0.71
COPS7A-211ENST00000540408 SYNMO15061 1565 aa19.49■□□□□ 0.71
COPS7A-211ENST00000540408 PRDM15P57071 1507 aaPredicted RBP19.48■□□□□ 0.71
COPS7A-211ENST00000540408 ARHGAP23Q9P227 1491 aa19.48■□□□□ 0.71
COPS7A-211ENST00000540408 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
COPS7A-211ENST00000540408 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
COPS7A-211ENST00000540408 SLIT1O75093 1534 aa19.47■□□□□ 0.71
COPS7A-211ENST00000540408 DAPK1P53355 1430 aa19.47■□□□□ 0.71
COPS7A-211ENST00000540408 CHIC2Q9UKJ5 165 aa19.46■□□□□ 0.71
COPS7A-211ENST00000540408 STRCP1A6NGW2 1772 aa19.46■□□□□ 0.71
COPS7A-211ENST00000540408 ALKQ9UM73 1620 aa19.45■□□□□ 0.7
COPS7A-211ENST00000540408 TMEM2Q9UHN6 1383 aa19.44■□□□□ 0.7
COPS7A-211ENST00000540408 CROCC2H7BZ55 1655 aa19.44■□□□□ 0.7
COPS7A-211ENST00000540408 FGD6Q6ZV73 1430 aa19.43■□□□□ 0.7
COPS7A-211ENST00000540408 IDI1Q13907 227 aa19.43■□□□□ 0.7
COPS7A-211ENST00000540408 PIK3C2BO00750 1634 aa19.4■□□□□ 0.7
COPS7A-211ENST00000540408 BCANQ96GW7 911 aa19.4■□□□□ 0.7
COPS7A-211ENST00000540408 KCNA6P17658 529 aa19.39■□□□□ 0.69
COPS7A-211ENST00000540408 SLC52A1Q9NWF4 448 aa19.39■□□□□ 0.69
COPS7A-211ENST00000540408 EFCAB6Q5THR3 1501 aa19.39■□□□□ 0.69
COPS7A-211ENST00000540408 LMTK2Q8IWU2 1503 aa19.38■□□□□ 0.69
COPS7A-211ENST00000540408 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
COPS7A-211ENST00000540408 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
COPS7A-211ENST00000540408 HDGFP51858 240 aaKnown RBP19.36■□□□□ 0.69
COPS7A-211ENST00000540408 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
COPS7A-211ENST00000540408 KDM5AP29375 1690 aaKnown RBP19.36■□□□□ 0.69
COPS7A-211ENST00000540408 TMEM94Q12767 1356 aa19.35■□□□□ 0.69
COPS7A-211ENST00000540408 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
COPS7A-211ENST00000540408 NOS1P29475 1434 aa19.33■□□□□ 0.68
COPS7A-211ENST00000540408 ADGRL2O95490 1459 aa19.3■□□□□ 0.68
COPS7A-211ENST00000540408 PPP1R15AO75807 674 aaPredicted RBP19.3■□□□□ 0.68
COPS7A-211ENST00000540408 XIRP1Q702N8 1843 aaKnown RBP19.3■□□□□ 0.68
COPS7A-211ENST00000540408 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
COPS7A-211ENST00000540408 TET3O43151 1660 aa19.29■□□□□ 0.68
COPS7A-211ENST00000540408 ADGRB3O60242 1522 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms