RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 RXRBP28702 533 aa18.38■□□□□ 0.53
TMEM109-203ENST00000540280 FBXO31Q5XUX0 539 aaPredicted RBP18.37■□□□□ 0.53
TMEM109-203ENST00000540280 ZRANB1Q9UGI0 708 aa18.37■□□□□ 0.53
TMEM109-203ENST00000540280 JCADQ9P266 1359 aa18.37■□□□□ 0.53
TMEM109-203ENST00000540280 PREX2Q70Z35 1606 aa18.37■□□□□ 0.53
TMEM109-203ENST00000540280 UGGT1Q9NYU2 1555 aa18.35■□□□□ 0.53
TMEM109-203ENST00000540280 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
TMEM109-203ENST00000540280 RBM33Q96EV2 1170 aaKnown RBP18.34■□□□□ 0.53
TMEM109-203ENST00000540280 MEX3CQ5U5Q3 659 aaKnown RBP18.33■□□□□ 0.52
TMEM109-203ENST00000540280 FAM135AQ9P2D6 1515 aa18.33■□□□□ 0.52
TMEM109-203ENST00000540280 A2MP01023 1474 aa18.32■□□□□ 0.52
TMEM109-203ENST00000540280 RGS12O14924 1447 aa18.31■□□□□ 0.52
TMEM109-203ENST00000540280 COL16A1Q07092 1604 aaPredicted RBP18.3■□□□□ 0.52
TMEM109-203ENST00000540280 ATP7AQ04656 1500 aa18.29■□□□□ 0.52
TMEM109-203ENST00000540280 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
TMEM109-203ENST00000540280 TROQ12816 1431 aaPredicted RBP18.28■□□□□ 0.52
TMEM109-203ENST00000540280 INO80Q9ULG1 1556 aaPredicted RBP18.27■□□□□ 0.52
TMEM109-203ENST00000540280 PZPP20742 1482 aa18.26■□□□□ 0.51
TMEM109-203ENST00000540280 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
TMEM109-203ENST00000540280 KDM5DQ9BY66 1539 aa18.26■□□□□ 0.51
TMEM109-203ENST00000540280 SPAG9O60271 1321 aaKnown RBP18.25■□□□□ 0.51
TMEM109-203ENST00000540280 LRRC9Q6ZRR7 1453 aa18.25■□□□□ 0.51
TMEM109-203ENST00000540280 MAP3K1Q13233 1512 aa18.24■□□□□ 0.51
TMEM109-203ENST00000540280 SYCP2Q9BX26 1530 aa18.24■□□□□ 0.51
TMEM109-203ENST00000540280 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
TMEM109-203ENST00000540280 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
TMEM109-203ENST00000540280 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
TMEM109-203ENST00000540280 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
TMEM109-203ENST00000540280 CDC42BPAQ5VT25 1732 aa18.23■□□□□ 0.51
TMEM109-203ENST00000540280 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
TMEM109-203ENST00000540280 ATP1B4Q9UN42 357 aaPredicted RBP18.23■□□□□ 0.51
TMEM109-203ENST00000540280 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
TMEM109-203ENST00000540280 LRP5O75197 1615 aa18.22■□□□□ 0.51
TMEM109-203ENST00000540280 CLIP1P30622 1438 aa18.22■□□□□ 0.51
TMEM109-203ENST00000540280 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
TMEM109-203ENST00000540280 FOXD1Q16676 465 aa18.21■□□□□ 0.51
TMEM109-203ENST00000540280 EP400Q96L91 3159 aa18.21■□□□□ 0.51
TMEM109-203ENST00000540280 SHPRHQ149N8 1683 aa18.2■□□□□ 0.5
TMEM109-203ENST00000540280 ADGBQ8N7X0 1667 aa18.2■□□□□ 0.5
TMEM109-203ENST00000540280 CDK11AQ9UQ88 783 aaPredicted RBP18.2■□□□□ 0.5
TMEM109-203ENST00000540280 LRRIQ1Q96JM4 1722 aa18.2■□□□□ 0.5
TMEM109-203ENST00000540280 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
TMEM109-203ENST00000540280 AFF2P51816 1311 aa18.16■□□□□ 0.5
TMEM109-203ENST00000540280 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
TMEM109-203ENST00000540280 SCAF11Q99590 1463 aaKnown RBP18.15■□□□□ 0.5
TMEM109-203ENST00000540280 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMEM109-203ENST00000540280 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
TMEM109-203ENST00000540280 UBR1Q8IWV7 1749 aa18.13■□□□□ 0.49
TMEM109-203ENST00000540280 TIAM1Q13009 1591 aa18.13■□□□□ 0.49
TMEM109-203ENST00000540280 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
TMEM109-203ENST00000540280 RBM6P78332 1123 aaKnown RBP18.1■□□□□ 0.49
TMEM109-203ENST00000540280 LTKP29376 864 aa18.09■□□□□ 0.49
TMEM109-203ENST00000540280 PROSER2Q86WR7 435 aaPredicted RBP18.07■□□□□ 0.48
TMEM109-203ENST00000540280 QTRT2Q9H974 415 aaKnown RBP18.07■□□□□ 0.48
TMEM109-203ENST00000540280 PRDM15P57071 1507 aaPredicted RBP18.06■□□□□ 0.48
TMEM109-203ENST00000540280 AHDC1Q5TGY3 1603 aaPredicted RBP18.05■□□□□ 0.48
TMEM109-203ENST00000540280 MSH6P52701 1360 aa18.04■□□□□ 0.48
TMEM109-203ENST00000540280 DIP2AQ14689 1571 aa18.04■□□□□ 0.48
TMEM109-203ENST00000540280 WASHC2CQ9Y4E1 1318 aa18.04■□□□□ 0.48
TMEM109-203ENST00000540280 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
TMEM109-203ENST00000540280 ARHGAP23Q9P227 1491 aa18.03■□□□□ 0.48
TMEM109-203ENST00000540280 TXNDC2Q86VQ3 553 aa18.03■□□□□ 0.48
TMEM109-203ENST00000540280 SLIT1O75093 1534 aa18.03■□□□□ 0.48
TMEM109-203ENST00000540280 KDM5AP29375 1690 aaKnown RBP18.03■□□□□ 0.48
TMEM109-203ENST00000540280 YY1P25490 414 aa18.02■□□□□ 0.48
TMEM109-203ENST00000540280 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
TMEM109-203ENST00000540280 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
TMEM109-203ENST00000540280 KIF3BO15066 747 aa18.01■□□□□ 0.47
TMEM109-203ENST00000540280 KCNA6P17658 529 aa18■□□□□ 0.47
TMEM109-203ENST00000540280 NWD1Q149M9 1564 aa18■□□□□ 0.47
TMEM109-203ENST00000540280 C8orf37Q96NL8 207 aa17.99■□□□□ 0.47
TMEM109-203ENST00000540280 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
TMEM109-203ENST00000540280 NHSL1Q5SYE7 1610 aa17.98■□□□□ 0.47
TMEM109-203ENST00000540280 CFAP65Q6ZU64 1925 aaKnown RBP17.98■□□□□ 0.47
TMEM109-203ENST00000540280 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
TMEM109-203ENST00000540280 DHX29Q7Z478 1369 aaKnown RBP17.98■□□□□ 0.47
TMEM109-203ENST00000540280 NKTRP30414 1462 aaKnown RBP17.98■□□□□ 0.47
TMEM109-203ENST00000540280 ERVK-7P63135 1459 aa17.97■□□□□ 0.47
TMEM109-203ENST00000540280 ABCC3O15438 1527 aa17.97■□□□□ 0.47
TMEM109-203ENST00000540280 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
TMEM109-203ENST00000540280 NGLY1Q96IV0 654 aa17.95■□□□□ 0.46
TMEM109-203ENST00000540280 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
TMEM109-203ENST00000540280 EEA1Q15075 1411 aa17.93■□□□□ 0.46
TMEM109-203ENST00000540280 CCDC125Q86Z20 511 aa17.93■□□□□ 0.46
TMEM109-203ENST00000540280 SLC26A8Q96RN1 970 aa17.92■□□□□ 0.46
TMEM109-203ENST00000540280 MAST1Q9Y2H9 1570 aa17.91■□□□□ 0.46
TMEM109-203ENST00000540280 EID1Q9Y6B2 187 aa17.91■□□□□ 0.46
TMEM109-203ENST00000540280 TET3O43151 1660 aa17.9■□□□□ 0.46
TMEM109-203ENST00000540280 PSDA5PKW4 1024 aaPredicted RBP17.89■□□□□ 0.45
TMEM109-203ENST00000540280 DEFB132Q7Z7B7 95 aa17.89■□□□□ 0.45
TMEM109-203ENST00000540280 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
TMEM109-203ENST00000540280 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
TMEM109-203ENST00000540280 HRCP23327 699 aa17.86■□□□□ 0.45
TMEM109-203ENST00000540280 RTEL1-TNFRSF6BF6WH68 1400 aa17.86■□□□□ 0.45
TMEM109-203ENST00000540280 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
TMEM109-203ENST00000540280 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
TMEM109-203ENST00000540280 BCL9LQ86UU0 1499 aa17.85■□□□□ 0.45
TMEM109-203ENST00000540280 TMEM2Q9UHN6 1383 aa17.84■□□□□ 0.45
TMEM109-203ENST00000540280 CFDP1Q9UEE9 299 aaPredicted RBP17.84■□□□□ 0.45
TMEM109-203ENST00000540280 CEP152O94986 1710 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms