RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 LMTK3Q96Q04 1460 aa20.57■□□□□ 0.88
CCDC130-202ENST00000540216 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
CCDC130-202ENST00000540216 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
CCDC130-202ENST00000540216 KDM5DQ9BY66 1539 aa20.57■□□□□ 0.88
CCDC130-202ENST00000540216 PREX1Q8TCU6 1659 aa20.56■□□□□ 0.88
CCDC130-202ENST00000540216 ZMYM3Q14202 1370 aa20.56■□□□□ 0.88
CCDC130-202ENST00000540216 NPATQ14207 1427 aa20.55■□□□□ 0.88
CCDC130-202ENST00000540216 NCOA1Q15788 1441 aa20.55■□□□□ 0.88
CCDC130-202ENST00000540216 SETD1BQ9UPS6 1966 aaKnown RBP20.55■□□□□ 0.88
CCDC130-202ENST00000540216 RRP7BPQ9NSQ0 103 aa20.54■□□□□ 0.88
CCDC130-202ENST00000540216 CHIC2Q9UKJ5 165 aa20.52■□□□□ 0.88
CCDC130-202ENST00000540216 RRBP1Q9P2E9 1410 aaKnown RBP20.52■□□□□ 0.87
CCDC130-202ENST00000540216 ZC3H13Q5T200 1668 aaKnown RBP20.51■□□□□ 0.87
CCDC130-202ENST00000540216 UHRF1BP1Q6BDS2 1440 aa20.51■□□□□ 0.87
CCDC130-202ENST00000540216 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
CCDC130-202ENST00000540216 WASHC2CQ9Y4E1 1318 aa20.5■□□□□ 0.87
CCDC130-202ENST00000540216 PRDM15P57071 1507 aaPredicted RBP20.49■□□□□ 0.87
CCDC130-202ENST00000540216 ROCK1Q13464 1354 aa20.48■□□□□ 0.87
CCDC130-202ENST00000540216 PTPRKQ15262 1439 aa20.48■□□□□ 0.87
CCDC130-202ENST00000540216 DEPDC5O75140 1603 aa20.48■□□□□ 0.87
CCDC130-202ENST00000540216 ABCC3O15438 1527 aa20.48■□□□□ 0.87
CCDC130-202ENST00000540216 PZPP20742 1482 aa20.47■□□□□ 0.87
CCDC130-202ENST00000540216 ANKRD50Q9ULJ7 1429 aa20.44■□□□□ 0.86
CCDC130-202ENST00000540216 KANK1Q14678 1352 aa20.42■□□□□ 0.86
CCDC130-202ENST00000540216 MYO3AQ8NEV4 1616 aa20.42■□□□□ 0.86
CCDC130-202ENST00000540216 CEP152O94986 1710 aa20.41■□□□□ 0.86
CCDC130-202ENST00000540216 ZNF142P52746 1687 aaPredicted RBP20.4■□□□□ 0.86
CCDC130-202ENST00000540216 HSPA2P54652 639 aa20.4■□□□□ 0.86
CCDC130-202ENST00000540216 CAMSAP1Q5T5Y3 1602 aa20.4■□□□□ 0.86
CCDC130-202ENST00000540216 VWDEQ8N2E2 1590 aa20.39■□□□□ 0.85
CCDC130-202ENST00000540216 ITGAEP38570 1179 aa20.38■□□□□ 0.85
CCDC130-202ENST00000540216 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
CCDC130-202ENST00000540216 ARHGAP31Q2M1Z3 1444 aa20.37■□□□□ 0.85
CCDC130-202ENST00000540216 TNRQ92752 1358 aa20.37■□□□□ 0.85
CCDC130-202ENST00000540216 CEP170BQ9Y4F5 1589 aaPredicted RBP20.37■□□□□ 0.85
CCDC130-202ENST00000540216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.851e-6■■□□□ 13
CCDC130-202ENST00000540216 SPATA31D1Q6ZQQ2 1576 aa20.36■□□□□ 0.85
CCDC130-202ENST00000540216 UNC13BO14795 1591 aa20.34■□□□□ 0.85
CCDC130-202ENST00000540216 FBXO31Q5XUX0 539 aaPredicted RBP20.34■□□□□ 0.85
CCDC130-202ENST00000540216 A2ML1A8K2U0 1454 aa20.34■□□□□ 0.85
CCDC130-202ENST00000540216 ERVK-7P63135 1459 aa20.33■□□□□ 0.85
CCDC130-202ENST00000540216 NLRP1Q9C000 1473 aa20.33■□□□□ 0.85
CCDC130-202ENST00000540216 EFCAB6Q5THR3 1501 aa20.3■□□□□ 0.84
CCDC130-202ENST00000540216 PLA2R1Q13018 1463 aa20.3■□□□□ 0.84
CCDC130-202ENST00000540216 GCC2Q8IWJ2 1684 aa20.28■□□□□ 0.84
CCDC130-202ENST00000540216 STRCQ7RTU9 1775 aa20.28■□□□□ 0.84
CCDC130-202ENST00000540216 TET3O43151 1660 aa20.27■□□□□ 0.84
CCDC130-202ENST00000540216 RPRD2Q5VT52 1461 aaKnown RBP20.27■□□□□ 0.84
CCDC130-202ENST00000540216 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
CCDC130-202ENST00000540216 IQGAP3Q86VI3 1631 aa20.25■□□□□ 0.83
CCDC130-202ENST00000540216 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
CCDC130-202ENST00000540216 NAIPQ13075 1403 aa20.25■□□□□ 0.83
CCDC130-202ENST00000540216 UGGT1Q9NYU2 1555 aa20.24■□□□□ 0.83
CCDC130-202ENST00000540216 PTPRTO14522 1441 aa20.23■□□□□ 0.83
CCDC130-202ENST00000540216 CFAP65Q6ZU64 1925 aaKnown RBP20.22■□□□□ 0.83
CCDC130-202ENST00000540216 NOS1P29475 1434 aa20.21■□□□□ 0.83
CCDC130-202ENST00000540216 PKD2Q13563 968 aa20.21■□□□□ 0.83
CCDC130-202ENST00000540216 NUP155O75694 1391 aa20.21■□□□□ 0.83
CCDC130-202ENST00000540216 THEMISQ8N1K5 641 aaPredicted RBP20.2■□□□□ 0.82
CCDC130-202ENST00000540216 SYNMO15061 1565 aa20.17■□□□□ 0.82
CCDC130-202ENST00000540216 UBR1Q8IWV7 1749 aa20.16■□□□□ 0.82
CCDC130-202ENST00000540216 E9PCH4 1651 aa20.16■□□□□ 0.82
CCDC130-202ENST00000540216 KDM5AP29375 1690 aaKnown RBP20.16■□□□□ 0.82
CCDC130-202ENST00000540216 POLR1AO95602 1720 aaPredicted RBP20.15■□□□□ 0.82
CCDC130-202ENST00000540216 PIK3C2BO00750 1634 aa20.14■□□□□ 0.81
CCDC130-202ENST00000540216 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
CCDC130-202ENST00000540216 SLC52A1Q9NWF4 448 aa20.14■□□□□ 0.81
CCDC130-202ENST00000540216 ANKLE2Q86XL3 938 aa20.12■□□□□ 0.81
CCDC130-202ENST00000540216 NEURL4Q96JN8 1562 aa20.1■□□□□ 0.81
CCDC130-202ENST00000540216 IDI1Q13907 227 aa20.1■□□□□ 0.81
CCDC130-202ENST00000540216 ADGRB3O60242 1522 aa20.1■□□□□ 0.81
CCDC130-202ENST00000540216 SLIT1O75093 1534 aa20.1■□□□□ 0.81
CCDC130-202ENST00000540216 ARHGAP23Q9P227 1491 aa20.1■□□□□ 0.81
CCDC130-202ENST00000540216 MED14O60244 1454 aa20.09■□□□□ 0.81
CCDC130-202ENST00000540216 ACIN1Q9UKV3 1341 aaKnown RBP20.08■□□□□ 0.81
CCDC130-202ENST00000540216 STAG3Q9UJ98 1225 aa20.08■□□□□ 0.81
CCDC130-202ENST00000540216 SCAF11Q99590 1463 aaKnown RBP20.06■□□□□ 0.8
CCDC130-202ENST00000540216 TMEM2Q9UHN6 1383 aa20.06■□□□□ 0.8
CCDC130-202ENST00000540216 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
CCDC130-202ENST00000540216 TRIM52Q96A61 297 aa20.05■□□□□ 0.8
CCDC130-202ENST00000540216 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
CCDC130-202ENST00000540216 IQGAP1P46940 1657 aa20.03■□□□□ 0.8
CCDC130-202ENST00000540216 SETD5Q9C0A6 1442 aa20.03■□□□□ 0.8
CCDC130-202ENST00000540216 EID1Q9Y6B2 187 aa20.02■□□□□ 0.8
CCDC130-202ENST00000540216 TMEM131LA2VDJ0 1609 aa20.02■□□□□ 0.79
CCDC130-202ENST00000540216 LTBP4Q8N2S1 1624 aa20.01■□□□□ 0.79
CCDC130-202ENST00000540216 TXNDC2Q86VQ3 553 aa20■□□□□ 0.79
CCDC130-202ENST00000540216 CERKQ8TCT0 537 aa20■□□□□ 0.79
CCDC130-202ENST00000540216 TRPM2O94759 1503 aa20■□□□□ 0.79
CCDC130-202ENST00000540216 SLC4A1APQ9BWU0 796 aaKnown RBP19.99■□□□□ 0.79
CCDC130-202ENST00000540216 LTKP29376 864 aa19.98■□□□□ 0.79
CCDC130-202ENST00000540216 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
CCDC130-202ENST00000540216 MYO5BQ9ULV0 1848 aa19.96■□□□□ 0.79
CCDC130-202ENST00000540216 ZFYVE9O95405 1425 aa19.95■□□□□ 0.78
CCDC130-202ENST00000540216 IQSEC2Q5JU85 1478 aa19.95■□□□□ 0.78
CCDC130-202ENST00000540216 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
CCDC130-202ENST00000540216 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
CCDC130-202ENST00000540216 RIMS2Q9UQ26 1411 aa19.93■□□□□ 0.78
CCDC130-202ENST00000540216 CHGAP10645 457 aaKnown RBP19.93■□□□□ 0.78
CCDC130-202ENST00000540216 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms