RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 DAPK1P53355 1430 aa10.8□□□□□ -0.68
LPCAT3-209ENST00000540060 ABCC5O15440 1437 aa10.79□□□□□ -0.68
LPCAT3-209ENST00000540060 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
LPCAT3-209ENST00000540060 FER1L4A9Z1Z3 1794 aa10.79□□□□□ -0.68
LPCAT3-209ENST00000540060 SPAG9O60271 1321 aaKnown RBP10.79□□□□□ -0.68
LPCAT3-209ENST00000540060 AGLP35573 1532 aa10.79□□□□□ -0.68
LPCAT3-209ENST00000540060 EIF2AK4Q9P2K8 1649 aaKnown RBP10.78□□□□□ -0.68
LPCAT3-209ENST00000540060 ZNF219Q9P2Y4 722 aaPredicted RBP10.78□□□□□ -0.68
LPCAT3-209ENST00000540060 MADDQ8WXG6 1647 aa10.77□□□□□ -0.68
LPCAT3-209ENST00000540060 RSPH4AQ5TD94 716 aa10.77□□□□□ -0.69
LPCAT3-209ENST00000540060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.69
LPCAT3-209ENST00000540060 ADGRL2O95490 1459 aa10.76□□□□□ -0.69
LPCAT3-209ENST00000540060 A2MP01023 1474 aa10.76□□□□□ -0.69
LPCAT3-209ENST00000540060 RIMS1Q86UR5 1692 aaKnown RBP10.76□□□□□ -0.69
LPCAT3-209ENST00000540060 RNF17Q9BXT8 1623 aaKnown RBP10.75□□□□□ -0.69
LPCAT3-209ENST00000540060 DUOX2Q9NRD8 1548 aa10.74□□□□□ -0.69
LPCAT3-209ENST00000540060 DEPDC5O75140 1603 aa10.73□□□□□ -0.69
LPCAT3-209ENST00000540060 GCC2Q8IWJ2 1684 aa10.73□□□□□ -0.69
LPCAT3-209ENST00000540060 FAM50AQ14320 339 aaKnown RBP10.73□□□□□ -0.69
LPCAT3-209ENST00000540060 MYT1LQ9UL68 1186 aa10.73□□□□□ -0.69
LPCAT3-209ENST00000540060 PTPRKQ15262 1439 aa10.73□□□□□ -0.69
LPCAT3-209ENST00000540060 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
LPCAT3-209ENST00000540060 TSPY4P0CV99 314 aa10.72□□□□□ -0.69
LPCAT3-209ENST00000540060 TSPY10P0CW01 314 aa10.72□□□□□ -0.69
LPCAT3-209ENST00000540060 MROH1Q8NDA8 1641 aa10.72□□□□□ -0.69
LPCAT3-209ENST00000540060 CLTCQ00610 1675 aaKnown RBP10.71□□□□□ -0.69
LPCAT3-209ENST00000540060 ZC3H13Q5T200 1668 aaKnown RBP10.71□□□□□ -0.69
LPCAT3-209ENST00000540060 NCOA1Q15788 1441 aa10.7□□□□□ -0.7
LPCAT3-209ENST00000540060 ERBINQ96RT1 1412 aa10.7□□□□□ -0.7
LPCAT3-209ENST00000540060 DHX29Q7Z478 1369 aaKnown RBP10.7□□□□□ -0.7
LPCAT3-209ENST00000540060 KIF15Q9NS87 1388 aa10.7□□□□□ -0.7
LPCAT3-209ENST00000540060 C3P01024 1663 aa10.69□□□□□ -0.7
LPCAT3-209ENST00000540060 PRDM15P57071 1507 aaPredicted RBP10.69□□□□□ -0.7
LPCAT3-209ENST00000540060 FAM135AQ9P2D6 1515 aa10.69□□□□□ -0.7
LPCAT3-209ENST00000540060 ANKRD30AQ9BXX3 1397 aa10.69□□□□□ -0.7
LPCAT3-209ENST00000540060 ARID4BQ4LE39 1312 aaPredicted RBP10.69□□□□□ -0.7
LPCAT3-209ENST00000540060 KDM4FA0A1W2PPD8 638 aa10.69□□□□□ -0.7
LPCAT3-209ENST00000540060 CEP152O94986 1710 aa10.69□□□□□ -0.7
LPCAT3-209ENST00000540060 ROCK1Q13464 1354 aa10.68□□□□□ -0.7
LPCAT3-209ENST00000540060 UNC13BO14795 1591 aa10.68□□□□□ -0.7
LPCAT3-209ENST00000540060 KDM5DQ9BY66 1539 aa10.67□□□□□ -0.7
LPCAT3-209ENST00000540060 PTPRMP28827 1452 aa10.67□□□□□ -0.7
LPCAT3-209ENST00000540060 CAMSAP1Q5T5Y3 1602 aa10.66□□□□□ -0.7
LPCAT3-209ENST00000540060 CHIC2Q9UKJ5 165 aa10.66□□□□□ -0.7
LPCAT3-209ENST00000540060 VWDEQ8N2E2 1590 aa10.65□□□□□ -0.71
LPCAT3-209ENST00000540060 MLECQ14165 292 aa10.64□□□□□ -0.71
LPCAT3-209ENST00000540060 RRP7BPQ9NSQ0 103 aa10.64□□□□□ -0.71
LPCAT3-209ENST00000540060 CNTLNQ9NXG0 1405 aa10.64□□□□□ -0.71
LPCAT3-209ENST00000540060 ABCC3O15438 1527 aa10.63□□□□□ -0.71
LPCAT3-209ENST00000540060 ANKRD50Q9ULJ7 1429 aa10.63□□□□□ -0.71
LPCAT3-209ENST00000540060 PREX1Q8TCU6 1659 aa10.63□□□□□ -0.71
LPCAT3-209ENST00000540060 IQGAP3Q86VI3 1631 aa10.62□□□□□ -0.71
LPCAT3-209ENST00000540060 HFM1A2PYH4 1435 aa10.62□□□□□ -0.71
LPCAT3-209ENST00000540060 KIF3BO15066 747 aa10.62□□□□□ -0.71
LPCAT3-209ENST00000540060 ITGAEP38570 1179 aa10.62□□□□□ -0.71
LPCAT3-209ENST00000540060 FXR2P51116 673 aaKnown RBP eCLIP10.62□□□□□ -0.71
LPCAT3-209ENST00000540060 NAIPQ13075 1403 aa10.61□□□□□ -0.71
LPCAT3-209ENST00000540060 TET3O43151 1660 aa10.61□□□□□ -0.71
LPCAT3-209ENST00000540060 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
LPCAT3-209ENST00000540060 LMTK2Q8IWU2 1503 aa10.6□□□□□ -0.71
LPCAT3-209ENST00000540060 EFCAB6Q5THR3 1501 aa10.59□□□□□ -0.71
LPCAT3-209ENST00000540060 MYO3AQ8NEV4 1616 aa10.59□□□□□ -0.71
LPCAT3-209ENST00000540060 GGT6Q6P531 493 aa10.59□□□□□ -0.71
LPCAT3-209ENST00000540060 ZNF142P52746 1687 aaPredicted RBP10.59□□□□□ -0.71
LPCAT3-209ENST00000540060 PZPP20742 1482 aa10.58□□□□□ -0.72
LPCAT3-209ENST00000540060 E9PCH4 1651 aa10.57□□□□□ -0.72
LPCAT3-209ENST00000540060 SPATA31D1Q6ZQQ2 1576 aa10.56□□□□□ -0.72
LPCAT3-209ENST00000540060 NPATQ14207 1427 aa10.56□□□□□ -0.72
LPCAT3-209ENST00000540060 ZMYM3Q14202 1370 aa10.55□□□□□ -0.72
LPCAT3-209ENST00000540060 CFAP65Q6ZU64 1925 aaKnown RBP10.55□□□□□ -0.72
LPCAT3-209ENST00000540060 ESF1Q9H501 851 aaKnown RBP10.55□□□□□ -0.72
LPCAT3-209ENST00000540060 SETD1BQ9UPS6 1966 aaKnown RBP10.55□□□□□ -0.72
LPCAT3-209ENST00000540060 KANK1Q14678 1352 aa10.54□□□□□ -0.72
LPCAT3-209ENST00000540060 ARHGAP31Q2M1Z3 1444 aa10.54□□□□□ -0.72
LPCAT3-209ENST00000540060 LMTK3Q96Q04 1460 aa10.54□□□□□ -0.72
LPCAT3-209ENST00000540060 WASHC2CQ9Y4E1 1318 aa10.54□□□□□ -0.72
LPCAT3-209ENST00000540060 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
LPCAT3-209ENST00000540060 POTEMA6NI47 508 aa10.53□□□□□ -0.72
LPCAT3-209ENST00000540060 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
LPCAT3-209ENST00000540060 ERVK-7P63135 1459 aa10.53□□□□□ -0.72
LPCAT3-209ENST00000540060 RPRD2Q5VT52 1461 aaKnown RBP10.53□□□□□ -0.72
LPCAT3-209ENST00000540060 SYNMO15061 1565 aa10.52□□□□□ -0.72
LPCAT3-209ENST00000540060 CEP170BQ9Y4F5 1589 aaPredicted RBP10.52□□□□□ -0.72
LPCAT3-209ENST00000540060 GABBR2O75899 941 aa10.52□□□□□ -0.73
LPCAT3-209ENST00000540060 PIK3C2BO00750 1634 aa10.51□□□□□ -0.73
LPCAT3-209ENST00000540060 KDM5AP29375 1690 aaKnown RBP10.5□□□□□ -0.73
LPCAT3-209ENST00000540060 SETD5Q9C0A6 1442 aa10.5□□□□□ -0.73
LPCAT3-209ENST00000540060 UBR1Q8IWV7 1749 aa10.5□□□□□ -0.73
LPCAT3-209ENST00000540060 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
LPCAT3-209ENST00000540060 NUP155O75694 1391 aa10.5□□□□□ -0.73
LPCAT3-209ENST00000540060 UHRF1BP1Q6BDS2 1440 aa10.5□□□□□ -0.73
LPCAT3-209ENST00000540060 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
LPCAT3-209ENST00000540060 MYO5BQ9ULV0 1848 aa10.49□□□□□ -0.73
LPCAT3-209ENST00000540060 POLR1AO95602 1720 aaPredicted RBP10.48□□□□□ -0.73
LPCAT3-209ENST00000540060 TNRQ92752 1358 aa10.48□□□□□ -0.73
LPCAT3-209ENST00000540060 RAB3GAP2Q9H2M9 1393 aa10.48□□□□□ -0.73
LPCAT3-209ENST00000540060 NOS1P29475 1434 aa10.48□□□□□ -0.73
LPCAT3-209ENST00000540060 NLRP1Q9C000 1473 aa10.48□□□□□ -0.73
LPCAT3-209ENST00000540060 A2ML1A8K2U0 1454 aa10.47□□□□□ -0.73
LPCAT3-209ENST00000540060 STRCQ7RTU9 1775 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms