RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 KIF3BO15066 747 aa11.5□□□□□ -0.57
LDHB-208ENST00000539782 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
LDHB-208ENST00000539782 TNRQ92752 1358 aa11.5□□□□□ -0.57
LDHB-208ENST00000539782 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
LDHB-208ENST00000539782 CAMSAP2Q08AD1 1489 aa11.49□□□□□ -0.57
LDHB-208ENST00000539782 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
LDHB-208ENST00000539782 WASHC2CQ9Y4E1 1318 aa11.48□□□□□ -0.57
LDHB-208ENST00000539782 NCOA2Q15596 1464 aa11.48□□□□□ -0.57
LDHB-208ENST00000539782 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
LDHB-208ENST00000539782 PZPP20742 1482 aa11.47□□□□□ -0.57
LDHB-208ENST00000539782 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
LDHB-208ENST00000539782 POLR1AO95602 1720 aaPredicted RBP11.46□□□□□ -0.57
LDHB-208ENST00000539782 TSPY4P0CV99 314 aa11.46□□□□□ -0.57
LDHB-208ENST00000539782 TSPY10P0CW01 314 aa11.46□□□□□ -0.57
LDHB-208ENST00000539782 CPS1P31327 1500 aa11.45□□□□□ -0.58
LDHB-208ENST00000539782 FBXO31Q5XUX0 539 aaPredicted RBP11.45□□□□□ -0.58
LDHB-208ENST00000539782 TOM1O60784 492 aa11.44□□□□□ -0.58
LDHB-208ENST00000539782 PIP4K2BP78356 416 aa11.44□□□□□ -0.58
LDHB-208ENST00000539782 ANKLE2Q86XL3 938 aa11.44□□□□□ -0.58
LDHB-208ENST00000539782 THEMISQ8N1K5 641 aaPredicted RBP11.44□□□□□ -0.58
LDHB-208ENST00000539782 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
LDHB-208ENST00000539782 ARHGEF5Q12774 1597 aa11.43□□□□□ -0.58
LDHB-208ENST00000539782 NEURL4Q96JN8 1562 aa11.43□□□□□ -0.58
LDHB-208ENST00000539782 SHANK2Q9UPX8 1470 aa11.43□□□□□ -0.58
LDHB-208ENST00000539782 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
LDHB-208ENST00000539782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.42□□□□□ -0.58
LDHB-208ENST00000539782 UGGT1Q9NYU2 1555 aa11.42□□□□□ -0.58
LDHB-208ENST00000539782 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
LDHB-208ENST00000539782 HSPA1LP34931 641 aa11.4□□□□□ -0.58
LDHB-208ENST00000539782 ZC3H13Q5T200 1668 aaKnown RBP11.39□□□□□ -0.59
LDHB-208ENST00000539782 ABCC3O15438 1527 aa11.38□□□□□ -0.59
LDHB-208ENST00000539782 DEPDC5O75140 1603 aa11.38□□□□□ -0.59
LDHB-208ENST00000539782 RNF17Q9BXT8 1623 aaKnown RBP11.38□□□□□ -0.59
LDHB-208ENST00000539782 LRRC9Q6ZRR7 1453 aa11.38□□□□□ -0.59
LDHB-208ENST00000539782 MED1Q15648 1581 aaPredicted RBP11.37□□□□□ -0.59
LDHB-208ENST00000539782 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
LDHB-208ENST00000539782 MAST1Q9Y2H9 1570 aa11.37□□□□□ -0.59
LDHB-208ENST00000539782 IQGAP1P46940 1657 aa11.37□□□□□ -0.59
LDHB-208ENST00000539782 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
LDHB-208ENST00000539782 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
LDHB-208ENST00000539782 EIF2AK4Q9P2K8 1649 aaKnown RBP11.37□□□□□ -0.59
LDHB-208ENST00000539782 MED14O60244 1454 aa11.37□□□□□ -0.59
LDHB-208ENST00000539782 ERVK-7P63135 1459 aa11.36□□□□□ -0.59
LDHB-208ENST00000539782 SYNMO15061 1565 aa11.34□□□□□ -0.59
LDHB-208ENST00000539782 MYOM3Q5VTT5 1437 aa11.34□□□□□ -0.59
LDHB-208ENST00000539782 DUOX2Q9NRD8 1548 aa11.33□□□□□ -0.6
LDHB-208ENST00000539782 CEP152O94986 1710 aa11.32□□□□□ -0.6
LDHB-208ENST00000539782 SCAF11Q99590 1463 aaKnown RBP11.32□□□□□ -0.6
LDHB-208ENST00000539782 LRRC7Q96NW7 1537 aa11.31□□□□□ -0.6
LDHB-208ENST00000539782 APLP2Q06481 763 aa11.31□□□□□ -0.6
LDHB-208ENST00000539782 EID1Q9Y6B2 187 aa11.31□□□□□ -0.6
LDHB-208ENST00000539782 MROH1Q8NDA8 1641 aa11.31□□□□□ -0.6
LDHB-208ENST00000539782 MAP3K1Q13233 1512 aa11.3□□□□□ -0.6
LDHB-208ENST00000539782 KIF15Q9NS87 1388 aa11.3□□□□□ -0.6
LDHB-208ENST00000539782 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
LDHB-208ENST00000539782 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
LDHB-208ENST00000539782 KANK1Q14678 1352 aa11.29□□□□□ -0.6
LDHB-208ENST00000539782 UBR1Q8IWV7 1749 aa11.29□□□□□ -0.6
LDHB-208ENST00000539782 ERBINQ96RT1 1412 aa11.29□□□□□ -0.6
LDHB-208ENST00000539782 TXNDC2Q86VQ3 553 aa11.29□□□□□ -0.6
LDHB-208ENST00000539782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.29□□□□□ -0.6
LDHB-208ENST00000539782 RRP7BPQ9NSQ0 103 aa11.28□□□□□ -0.6
LDHB-208ENST00000539782 PRDM15P57071 1507 aaPredicted RBP11.28□□□□□ -0.6
LDHB-208ENST00000539782 ALKQ9UM73 1620 aa11.27□□□□□ -0.6
LDHB-208ENST00000539782 ARHGAP31Q2M1Z3 1444 aa11.27□□□□□ -0.6
LDHB-208ENST00000539782 CROCC2H7BZ55 1655 aa11.27□□□□□ -0.6
LDHB-208ENST00000539782 STRCP1A6NGW2 1772 aa11.27□□□□□ -0.61
LDHB-208ENST00000539782 SLIT1O75093 1534 aa11.27□□□□□ -0.61
LDHB-208ENST00000539782 LOC105371045A0A1W2PR82 267 aa11.27□□□□□ -0.61
LDHB-208ENST00000539782 ARHGAP23Q9P227 1491 aa11.26□□□□□ -0.61
LDHB-208ENST00000539782 PTPN23Q9H3S7 1636 aa11.26□□□□□ -0.61
LDHB-208ENST00000539782 LTKP29376 864 aa11.25□□□□□ -0.61
LDHB-208ENST00000539782 ABCC5O15440 1437 aa11.25□□□□□ -0.61
LDHB-208ENST00000539782 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
LDHB-208ENST00000539782 PIK3C2BO00750 1634 aa11.24□□□□□ -0.61
LDHB-208ENST00000539782 ANKRD30AQ9BXX3 1397 aa11.24□□□□□ -0.61
LDHB-208ENST00000539782 TMEM2Q9UHN6 1383 aa11.24□□□□□ -0.61
LDHB-208ENST00000539782 DAPK1P53355 1430 aa11.24□□□□□ -0.61
LDHB-208ENST00000539782 EFCAB6Q5THR3 1501 aa11.24□□□□□ -0.61
LDHB-208ENST00000539782 BCANQ96GW7 911 aa11.23□□□□□ -0.61
LDHB-208ENST00000539782 FGD6Q6ZV73 1430 aa11.22□□□□□ -0.61
LDHB-208ENST00000539782 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
LDHB-208ENST00000539782 LMTK2Q8IWU2 1503 aa11.2□□□□□ -0.62
LDHB-208ENST00000539782 TMEM94Q12767 1356 aa11.2□□□□□ -0.62
LDHB-208ENST00000539782 KDM5AP29375 1690 aaKnown RBP11.2□□□□□ -0.62
LDHB-208ENST00000539782 KCNA6P17658 529 aa11.19□□□□□ -0.62
LDHB-208ENST00000539782 IDI1Q13907 227 aa11.19□□□□□ -0.62
LDHB-208ENST00000539782 PROSER2Q86WR7 435 aaPredicted RBP11.19□□□□□ -0.62
LDHB-208ENST00000539782 SLC26A8Q96RN1 970 aa11.19□□□□□ -0.62
LDHB-208ENST00000539782 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
LDHB-208ENST00000539782 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
LDHB-208ENST00000539782 XIRP1Q702N8 1843 aaKnown RBP11.17□□□□□ -0.62
LDHB-208ENST00000539782 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
LDHB-208ENST00000539782 NKTRP30414 1462 aaKnown RBP11.17□□□□□ -0.62
LDHB-208ENST00000539782 MSH6P52701 1360 aa11.16□□□□□ -0.62
LDHB-208ENST00000539782 FAM50AQ14320 339 aaKnown RBP11.16□□□□□ -0.62
LDHB-208ENST00000539782 SLC52A1Q9NWF4 448 aa11.16□□□□□ -0.62
LDHB-208ENST00000539782 NOS1P29475 1434 aa11.16□□□□□ -0.62
LDHB-208ENST00000539782 ROBO1Q9Y6N7 1651 aa11.15□□□□□ -0.62
LDHB-208ENST00000539782 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms