RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 MPHOSPH9Q99550 1183 aa23.73■■□□□ 1.39
TRAF3-204ENST00000539721 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
TRAF3-204ENST00000539721 DEPDC5O75140 1603 aa23.72■■□□□ 1.39
TRAF3-204ENST00000539721 SLC4A1APQ9BWU0 796 aaKnown RBP23.7■■□□□ 1.39
TRAF3-204ENST00000539721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.69■■□□□ 1.38
TRAF3-204ENST00000539721 IQGAP3Q86VI3 1631 aa23.69■■□□□ 1.38
TRAF3-204ENST00000539721 BCORL1Q5H9F3 1711 aa23.68■■□□□ 1.38
TRAF3-204ENST00000539721 KIF3BO15066 747 aa23.68■■□□□ 1.38
TRAF3-204ENST00000539721 ARHGEF40Q8TER5 1519 aa23.68■■□□□ 1.38
TRAF3-204ENST00000539721 ATP10AO60312 1499 aa23.68■■□□□ 1.38
TRAF3-204ENST00000539721 FAM135AQ9P2D6 1515 aa23.67■■□□□ 1.38
TRAF3-204ENST00000539721 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
TRAF3-204ENST00000539721 REREQ9P2R6 1566 aa23.64■■□□□ 1.38
TRAF3-204ENST00000539721 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.37
TRAF3-204ENST00000539721 MROH1Q8NDA8 1641 aa23.64■■□□□ 1.37
TRAF3-204ENST00000539721 KANK1Q14678 1352 aa23.61■■□□□ 1.37
TRAF3-204ENST00000539721 PKD2Q13563 968 aa23.6■■□□□ 1.37
TRAF3-204ENST00000539721 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
TRAF3-204ENST00000539721 FOXD1Q16676 465 aa23.6■■□□□ 1.37
TRAF3-204ENST00000539721 AGLP35573 1532 aa23.56■■□□□ 1.36
TRAF3-204ENST00000539721 TET3O43151 1660 aa23.56■■□□□ 1.36
TRAF3-204ENST00000539721 GGT6Q6P531 493 aa23.55■■□□□ 1.36
TRAF3-204ENST00000539721 CEP152O94986 1710 aa23.55■■□□□ 1.36
TRAF3-204ENST00000539721 SIGLEC1Q9BZZ2 1709 aa23.55■■□□□ 1.36
TRAF3-204ENST00000539721 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
TRAF3-204ENST00000539721 ANKRD30BQ9BXX2 1392 aa23.53■■□□□ 1.36
TRAF3-204ENST00000539721 NEUROD1Q13562 356 aa23.52■■□□□ 1.36
TRAF3-204ENST00000539721 E9PCH4 1651 aa23.51■■□□□ 1.35
TRAF3-204ENST00000539721 LMTK2Q8IWU2 1503 aa23.51■■□□□ 1.35
TRAF3-204ENST00000539721 ZC3H13Q5T200 1668 aaKnown RBP23.49■■□□□ 1.35
TRAF3-204ENST00000539721 ABCC3O15438 1527 aa23.48■■□□□ 1.35
TRAF3-204ENST00000539721 EFCAB6Q5THR3 1501 aa23.47■■□□□ 1.35
TRAF3-204ENST00000539721 WASHC2CQ9Y4E1 1318 aa23.46■■□□□ 1.35
TRAF3-204ENST00000539721 CAMSAP1Q5T5Y3 1602 aa23.45■■□□□ 1.34
TRAF3-204ENST00000539721 SPHKAPQ2M3C7 1700 aa23.42■■□□□ 1.34
TRAF3-204ENST00000539721 RPRD2Q5VT52 1461 aaKnown RBP23.42■■□□□ 1.34
TRAF3-204ENST00000539721 ARID4BQ4LE39 1312 aaPredicted RBP23.42■■□□□ 1.34
TRAF3-204ENST00000539721 TONSLQ96HA7 1378 aa23.41■■□□□ 1.34
TRAF3-204ENST00000539721 MLECQ14165 292 aa23.4■■□□□ 1.34
TRAF3-204ENST00000539721 PLA2R1Q13018 1463 aa23.39■■□□□ 1.33
TRAF3-204ENST00000539721 TIMELESSQ9UNS1 1208 aa23.39■■□□□ 1.33
TRAF3-204ENST00000539721 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
TRAF3-204ENST00000539721 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
TRAF3-204ENST00000539721 CCDC144AA2RUR9 1427 aa23.37■■□□□ 1.33
TRAF3-204ENST00000539721 TRPM2O94759 1503 aa23.36■■□□□ 1.33
TRAF3-204ENST00000539721 PTPRTO14522 1441 aa23.36■■□□□ 1.33
TRAF3-204ENST00000539721 NPATQ14207 1427 aa23.36■■□□□ 1.33
TRAF3-204ENST00000539721 CFAP65Q6ZU64 1925 aaKnown RBP23.35■■□□□ 1.33
TRAF3-204ENST00000539721 ARHGAP31Q2M1Z3 1444 aa23.34■■□□□ 1.33
TRAF3-204ENST00000539721 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
TRAF3-204ENST00000539721 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
TRAF3-204ENST00000539721 PREX1Q8TCU6 1659 aa23.28■■□□□ 1.32
TRAF3-204ENST00000539721 CNTLNQ9NXG0 1405 aa23.27■■□□□ 1.32
TRAF3-204ENST00000539721 FER1L4A9Z1Z3 1794 aa23.25■■□□□ 1.31
TRAF3-204ENST00000539721 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
TRAF3-204ENST00000539721 NOS1P29475 1434 aa23.25■■□□□ 1.31
TRAF3-204ENST00000539721 MROH2AA6NES4 1674 aa23.24■■□□□ 1.31
TRAF3-204ENST00000539721 UGGT1Q9NYU2 1555 aa23.24■■□□□ 1.31
TRAF3-204ENST00000539721 PPP1R15AO75807 674 aaPredicted RBP23.24■■□□□ 1.31
TRAF3-204ENST00000539721 SYNMO15061 1565 aa23.23■■□□□ 1.31
TRAF3-204ENST00000539721 KIF1BO60333 1816 aa23.23■■□□□ 1.31
TRAF3-204ENST00000539721 ERVK-7P63135 1459 aa23.2■■□□□ 1.31
TRAF3-204ENST00000539721 ZMYM3Q14202 1370 aa23.2■■□□□ 1.3
TRAF3-204ENST00000539721 PIK3C2BO00750 1634 aa23.19■■□□□ 1.3
TRAF3-204ENST00000539721 SPATA31E1Q6ZUB1 1445 aa23.18■■□□□ 1.3
TRAF3-204ENST00000539721 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
TRAF3-204ENST00000539721 SPATA31D1Q6ZQQ2 1576 aa23.17■■□□□ 1.3
TRAF3-204ENST00000539721 RGL3Q3MIN7 710 aa23.17■■□□□ 1.3
TRAF3-204ENST00000539721 NEURL4Q96JN8 1562 aa23.16■■□□□ 1.3
TRAF3-204ENST00000539721 MADDQ8WXG6 1647 aa23.15■■□□□ 1.3
TRAF3-204ENST00000539721 C3P01024 1663 aa23.13■■□□□ 1.29
TRAF3-204ENST00000539721 ADAMTSL3P82987 1691 aa23.12■■□□□ 1.29
TRAF3-204ENST00000539721 RIMS1Q86UR5 1692 aaKnown RBP23.12■■□□□ 1.29
TRAF3-204ENST00000539721 ADGRB3O60242 1522 aa23.12■■□□□ 1.29
TRAF3-204ENST00000539721 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
TRAF3-204ENST00000539721 SLC52A1Q9NWF4 448 aa23.12■■□□□ 1.29
TRAF3-204ENST00000539721 CHGAP10645 457 aaKnown RBP23.1■■□□□ 1.29
TRAF3-204ENST00000539721 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
TRAF3-204ENST00000539721 IDI1Q13907 227 aa23.08■■□□□ 1.29
TRAF3-204ENST00000539721 NBPF8Q3BBV2 869 aa23.06■■□□□ 1.28
TRAF3-204ENST00000539721 ZNF326Q5BKZ1 582 aaKnown RBP23.06■■□□□ 1.28
TRAF3-204ENST00000539721 UHRF1BP1Q6BDS2 1440 aa23.06■■□□□ 1.28
TRAF3-204ENST00000539721 IFT172Q9UG01 1749 aa23.06■■□□□ 1.28
TRAF3-204ENST00000539721 MYO5BQ9ULV0 1848 aa23.05■■□□□ 1.28
TRAF3-204ENST00000539721 TNRQ92752 1358 aa23.05■■□□□ 1.28
TRAF3-204ENST00000539721 CEBPAP49715 358 aaPredicted RBP23.05■■□□□ 1.28
TRAF3-204ENST00000539721 TMEM131LA2VDJ0 1609 aa23.05■■□□□ 1.28
TRAF3-204ENST00000539721 PPLO60437 1756 aa23.02■■□□□ 1.28
TRAF3-204ENST00000539721 PLPPR3Q6T4P5 718 aa23.02■■□□□ 1.28
TRAF3-204ENST00000539721 PRAG1Q86YV5 1406 aa23.02■■□□□ 1.27
TRAF3-204ENST00000539721 STAC3Q96MF2 364 aa23■■□□□ 1.27
TRAF3-204ENST00000539721 STAG3Q9UJ98 1225 aa22.99■■□□□ 1.27
TRAF3-204ENST00000539721 MYOM2P54296 1465 aa22.99■■□□□ 1.27
TRAF3-204ENST00000539721 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
TRAF3-204ENST00000539721 TRPM1Q7Z4N2 1603 aa22.98■■□□□ 1.27
TRAF3-204ENST00000539721 RALGAPBQ86X10 1494 aa22.97■■□□□ 1.27
TRAF3-204ENST00000539721 NEXMIFQ5QGS0 1516 aa22.97■■□□□ 1.27
TRAF3-204ENST00000539721 NLRP1Q9C000 1473 aa22.96■■□□□ 1.27
TRAF3-204ENST00000539721 KDM5AP29375 1690 aaKnown RBP22.95■■□□□ 1.26
TRAF3-204ENST00000539721 A2ML1A8K2U0 1454 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms