RNA–Protein interactions for RNA: ENST00000539649.1

PGA3-205, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-205ENST00000539649 CLTCQ00610 1675 aaKnown RBP15.32■□□□□ 0.04
PGA3-205ENST00000539649 PTPRTO14522 1441 aa15.32■□□□□ 0.04
PGA3-205ENST00000539649 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
PGA3-205ENST00000539649 STRCQ7RTU9 1775 aa15.31■□□□□ 0.04
PGA3-205ENST00000539649 KIF3BO15066 747 aa15.31■□□□□ 0.04
PGA3-205ENST00000539649 SETD1BQ9UPS6 1966 aaKnown RBP15.29■□□□□ 0.04
PGA3-205ENST00000539649 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
PGA3-205ENST00000539649 EIF2AK4Q9P2K8 1649 aaKnown RBP15.29■□□□□ 0.04
PGA3-205ENST00000539649 DUOX2Q9NRD8 1548 aa15.29■□□□□ 0.04
PGA3-205ENST00000539649 CERKQ8TCT0 537 aa15.29■□□□□ 0.04
PGA3-205ENST00000539649 KIF15Q9NS87 1388 aa15.28■□□□□ 0.04
PGA3-205ENST00000539649 KDM5DQ9BY66 1539 aa15.27■□□□□ 0.04
PGA3-205ENST00000539649 MROH1Q8NDA8 1641 aa15.26■□□□□ 0.03
PGA3-205ENST00000539649 FAM50AQ14320 339 aaKnown RBP15.26■□□□□ 0.03
PGA3-205ENST00000539649 PPARGC1BQ86YN6 1023 aaKnown RBP15.26■□□□□ 0.03
PGA3-205ENST00000539649 PZPP20742 1482 aa15.26■□□□□ 0.03
PGA3-205ENST00000539649 PLA2R1Q13018 1463 aa15.26■□□□□ 0.03
PGA3-205ENST00000539649 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
PGA3-205ENST00000539649 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
PGA3-205ENST00000539649 ADGRL2O95490 1459 aa15.25■□□□□ 0.03
PGA3-205ENST00000539649 ZNF142P52746 1687 aaPredicted RBP15.25■□□□□ 0.03
PGA3-205ENST00000539649 CEP170BQ9Y4F5 1589 aaPredicted RBP15.24■□□□□ 0.03
PGA3-205ENST00000539649 WASHC2CQ9Y4E1 1318 aa15.24■□□□□ 0.03
PGA3-205ENST00000539649 RRP7BPQ9NSQ0 103 aa15.24■□□□□ 0.03
PGA3-205ENST00000539649 ERBINQ96RT1 1412 aa15.24■□□□□ 0.03
PGA3-205ENST00000539649 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
PGA3-205ENST00000539649 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
PGA3-205ENST00000539649 FBXO31Q5XUX0 539 aaPredicted RBP15.23■□□□□ 0.03
PGA3-205ENST00000539649 CHIC2Q9UKJ5 165 aa15.23■□□□□ 0.03
PGA3-205ENST00000539649 ABCC3O15438 1527 aa15.22■□□□□ 0.03
PGA3-205ENST00000539649 PKD2Q13563 968 aa15.22■□□□□ 0.03
PGA3-205ENST00000539649 TNRQ92752 1358 aa15.22■□□□□ 0.03
PGA3-205ENST00000539649 ZC3H13Q5T200 1668 aaKnown RBP15.21■□□□□ 0.03
PGA3-205ENST00000539649 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.02
PGA3-205ENST00000539649 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
PGA3-205ENST00000539649 PRDM15P57071 1507 aaPredicted RBP15.2■□□□□ 0.02
PGA3-205ENST00000539649 DEPDC5O75140 1603 aa15.2■□□□□ 0.02
PGA3-205ENST00000539649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.19■□□□□ 0.02
PGA3-205ENST00000539649 CEP152O94986 1710 aa15.17■□□□□ 0.02
PGA3-205ENST00000539649 NLRP1Q9C000 1473 aa15.17■□□□□ 0.02
PGA3-205ENST00000539649 RRBP1Q9P2E9 1410 aaKnown RBP15.16■□□□□ 0.02
PGA3-205ENST00000539649 SPATA31D1Q6ZQQ2 1576 aa15.15■□□□□ 0.02
PGA3-205ENST00000539649 IQSEC2Q5JU85 1478 aa15.15■□□□□ 0.02
PGA3-205ENST00000539649 ROCK1Q13464 1354 aa15.15■□□□□ 0.02
PGA3-205ENST00000539649 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
PGA3-205ENST00000539649 ARHGAP31Q2M1Z3 1444 aa15.14■□□□□ 0.01
PGA3-205ENST00000539649 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
PGA3-205ENST00000539649 ERVK-7P63135 1459 aa15.14■□□□□ 0.01
PGA3-205ENST00000539649 THEMISQ8N1K5 641 aaPredicted RBP15.12■□□□□ 0.01
PGA3-205ENST00000539649 ZNF335Q9H4Z2 1342 aaPredicted RBP15.12■□□□□ 0.01
PGA3-205ENST00000539649 LMTK2Q8IWU2 1503 aa15.12■□□□□ 0.01
PGA3-205ENST00000539649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
PGA3-205ENST00000539649 NEURL4Q96JN8 1562 aa15.11■□□□□ 0.01
PGA3-205ENST00000539649 UGGT1Q9NYU2 1555 aa15.11■□□□□ 0.01
PGA3-205ENST00000539649 KANK1Q14678 1352 aa15.11■□□□□ 0.01
PGA3-205ENST00000539649 MED14O60244 1454 aa15.09■□□□□ 0.01
PGA3-205ENST00000539649 ITGAEP38570 1179 aa15.09■□□□□ 0.01
PGA3-205ENST00000539649 UNC13BO14795 1591 aa15.08■□□□□ 0
PGA3-205ENST00000539649 ANKLE2Q86XL3 938 aa15.08■□□□□ 0
PGA3-205ENST00000539649 CFAP65Q6ZU64 1925 aaKnown RBP15.07■□□□□ 0
PGA3-205ENST00000539649 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
PGA3-205ENST00000539649 NPHP4O75161 1426 aaPredicted RBP15.04■□□□□ -0
PGA3-205ENST00000539649 TET3O43151 1660 aa15.03■□□□□ -0
PGA3-205ENST00000539649 ARHGAP23Q9P227 1491 aa15.03■□□□□ -0
PGA3-205ENST00000539649 POLR1AO95602 1720 aaPredicted RBP15.02□□□□□ -0.01
PGA3-205ENST00000539649 IQGAP3Q86VI3 1631 aa15.02□□□□□ -0.01
PGA3-205ENST00000539649 GCC2Q8IWJ2 1684 aa15.01□□□□□ -0.01
PGA3-205ENST00000539649 SYNMO15061 1565 aa15.01□□□□□ -0.01
PGA3-205ENST00000539649 SLIT1O75093 1534 aa15.01□□□□□ -0.01
PGA3-205ENST00000539649 CPS1P31327 1500 aa15.01□□□□□ -0.01
PGA3-205ENST00000539649 RPRD2Q5VT52 1461 aaKnown RBP15.01□□□□□ -0.01
PGA3-205ENST00000539649 NOS1P29475 1434 aa15□□□□□ -0.01
PGA3-205ENST00000539649 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
PGA3-205ENST00000539649 NAIPQ13075 1403 aa15□□□□□ -0.01
PGA3-205ENST00000539649 LTKP29376 864 aa14.98□□□□□ -0.01
PGA3-205ENST00000539649 PIK3C2BO00750 1634 aa14.98□□□□□ -0.01
PGA3-205ENST00000539649 NUP155O75694 1391 aa14.98□□□□□ -0.01
PGA3-205ENST00000539649 E9PCH4 1651 aa14.97□□□□□ -0.01
PGA3-205ENST00000539649 SCAF11Q99590 1463 aaKnown RBP14.97□□□□□ -0.01
PGA3-205ENST00000539649 IDI1Q13907 227 aa14.97□□□□□ -0.01
PGA3-205ENST00000539649 HFM1A2PYH4 1435 aa14.97□□□□□ -0.01
PGA3-205ENST00000539649 TMEM2Q9UHN6 1383 aa14.97□□□□□ -0.01
PGA3-205ENST00000539649 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.01
PGA3-205ENST00000539649 KDM5AP29375 1690 aaKnown RBP14.96□□□□□ -0.01
PGA3-205ENST00000539649 IQGAP1P46940 1657 aa14.96□□□□□ -0.01
PGA3-205ENST00000539649 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
PGA3-205ENST00000539649 SLC52A1Q9NWF4 448 aa14.94□□□□□ -0.02
PGA3-205ENST00000539649 ADGRB3O60242 1522 aa14.92□□□□□ -0.02
PGA3-205ENST00000539649 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
PGA3-205ENST00000539649 LRRC7Q96NW7 1537 aa14.91□□□□□ -0.02
PGA3-205ENST00000539649 ALKQ9UM73 1620 aa14.89□□□□□ -0.03
PGA3-205ENST00000539649 TOM1O60784 492 aa14.89□□□□□ -0.03
PGA3-205ENST00000539649 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
PGA3-205ENST00000539649 TMEM131LA2VDJ0 1609 aa14.88□□□□□ -0.03
PGA3-205ENST00000539649 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
PGA3-205ENST00000539649 MYO5BQ9ULV0 1848 aa14.87□□□□□ -0.03
PGA3-205ENST00000539649 STRCP1A6NGW2 1772 aa14.86□□□□□ -0.03
PGA3-205ENST00000539649 SPHKAPQ2M3C7 1700 aa14.86□□□□□ -0.03
PGA3-205ENST00000539649 KCNA6P17658 529 aa14.82□□□□□ -0.04
PGA3-205ENST00000539649 HSPA1LP34931 641 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms