RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 RRP7BPQ9NSQ0 103 aa13.75□□□□□ -0.21
RTN4IP1-204ENST00000539449 ABCC1P33527 1531 aa13.74□□□□□ -0.21
RTN4IP1-204ENST00000539449 SETD5Q9C0A6 1442 aa13.74□□□□□ -0.21
RTN4IP1-204ENST00000539449 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
RTN4IP1-204ENST00000539449 RAB3GAP2Q9H2M9 1393 aa13.73□□□□□ -0.21
RTN4IP1-204ENST00000539449 NAIPQ13075 1403 aa13.73□□□□□ -0.21
RTN4IP1-204ENST00000539449 GCC2Q8IWJ2 1684 aa13.72□□□□□ -0.21
RTN4IP1-204ENST00000539449 KIAA1107Q9UPP5 1409 aa13.72□□□□□ -0.21
RTN4IP1-204ENST00000539449 TOM1O60784 492 aa13.71□□□□□ -0.21
RTN4IP1-204ENST00000539449 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.21
RTN4IP1-204ENST00000539449 HFM1A2PYH4 1435 aa13.71□□□□□ -0.22
RTN4IP1-204ENST00000539449 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
RTN4IP1-204ENST00000539449 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
RTN4IP1-204ENST00000539449 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
RTN4IP1-204ENST00000539449 REREQ9P2R6 1566 aa13.69□□□□□ -0.22
RTN4IP1-204ENST00000539449 DIP2CQ9Y2E4 1556 aa13.69□□□□□ -0.22
RTN4IP1-204ENST00000539449 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
RTN4IP1-204ENST00000539449 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
RTN4IP1-204ENST00000539449 MAST1Q9Y2H9 1570 aa13.68□□□□□ -0.22
RTN4IP1-204ENST00000539449 PKD2Q13563 968 aa13.67□□□□□ -0.22
RTN4IP1-204ENST00000539449 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
RTN4IP1-204ENST00000539449 AGLP35573 1532 aa13.67□□□□□ -0.22
RTN4IP1-204ENST00000539449 PLA2R1Q13018 1463 aa13.66□□□□□ -0.22
RTN4IP1-204ENST00000539449 ZNF518AQ6AHZ1 1483 aa13.66□□□□□ -0.22
RTN4IP1-204ENST00000539449 KDM5CP41229 1560 aa13.66□□□□□ -0.22
RTN4IP1-204ENST00000539449 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
RTN4IP1-204ENST00000539449 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
RTN4IP1-204ENST00000539449 RSPH4AQ5TD94 716 aa13.65□□□□□ -0.22
RTN4IP1-204ENST00000539449 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
RTN4IP1-204ENST00000539449 RGS17Q9UGC6 210 aaPredicted RBP13.65□□□□□ -0.22
RTN4IP1-204ENST00000539449 NPATQ14207 1427 aa13.64□□□□□ -0.23
RTN4IP1-204ENST00000539449 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
RTN4IP1-204ENST00000539449 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
RTN4IP1-204ENST00000539449 ZNF142P52746 1687 aaPredicted RBP13.64□□□□□ -0.23
RTN4IP1-204ENST00000539449 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
RTN4IP1-204ENST00000539449 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
RTN4IP1-204ENST00000539449 ANKRD30AQ9BXX3 1397 aa13.63□□□□□ -0.23
RTN4IP1-204ENST00000539449 HRCP23327 699 aa13.63□□□□□ -0.23
RTN4IP1-204ENST00000539449 CPS1P31327 1500 aa13.63□□□□□ -0.23
RTN4IP1-204ENST00000539449 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
RTN4IP1-204ENST00000539449 ALKQ9UM73 1620 aa13.62□□□□□ -0.23
RTN4IP1-204ENST00000539449 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
RTN4IP1-204ENST00000539449 PLXNC1O60486 1568 aa13.61□□□□□ -0.23
RTN4IP1-204ENST00000539449 INO80Q9ULG1 1556 aaPredicted RBP13.61□□□□□ -0.23
RTN4IP1-204ENST00000539449 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
RTN4IP1-204ENST00000539449 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
RTN4IP1-204ENST00000539449 KIF15Q9NS87 1388 aa13.59□□□□□ -0.23
RTN4IP1-204ENST00000539449 CEP170BQ9Y4F5 1589 aaPredicted RBP13.59□□□□□ -0.23
RTN4IP1-204ENST00000539449 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
RTN4IP1-204ENST00000539449 ZMYM3Q14202 1370 aa13.58□□□□□ -0.24
RTN4IP1-204ENST00000539449 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
RTN4IP1-204ENST00000539449 ANKRD50Q9ULJ7 1429 aa13.57□□□□□ -0.24
RTN4IP1-204ENST00000539449 MLH3Q9UHC1 1453 aa13.57□□□□□ -0.24
RTN4IP1-204ENST00000539449 TRIM52Q96A61 297 aa13.55□□□□□ -0.24
RTN4IP1-204ENST00000539449 DUOX2Q9NRD8 1548 aa13.54□□□□□ -0.24
RTN4IP1-204ENST00000539449 SETD1AO15047 1707 aaKnown RBP13.54□□□□□ -0.24
RTN4IP1-204ENST00000539449 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
RTN4IP1-204ENST00000539449 POTEAQ6S8J7 498 aa13.54□□□□□ -0.24
RTN4IP1-204ENST00000539449 CLTCQ00610 1675 aaKnown RBP13.53□□□□□ -0.24
RTN4IP1-204ENST00000539449 PZPP20742 1482 aa13.52□□□□□ -0.25
RTN4IP1-204ENST00000539449 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.25
RTN4IP1-204ENST00000539449 UNC13BO14795 1591 aa13.5□□□□□ -0.25
RTN4IP1-204ENST00000539449 VWDEQ8N2E2 1590 aa13.5□□□□□ -0.25
RTN4IP1-204ENST00000539449 MPHOSPH9Q99550 1183 aa13.5□□□□□ -0.25
RTN4IP1-204ENST00000539449 ERBINQ96RT1 1412 aa13.48□□□□□ -0.25
RTN4IP1-204ENST00000539449 DHX29Q7Z478 1369 aaKnown RBP13.48□□□□□ -0.25
RTN4IP1-204ENST00000539449 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
RTN4IP1-204ENST00000539449 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
RTN4IP1-204ENST00000539449 SIN3AQ96ST3 1273 aa13.47□□□□□ -0.25
RTN4IP1-204ENST00000539449 A2MP01023 1474 aa13.47□□□□□ -0.25
RTN4IP1-204ENST00000539449 NUP155O75694 1391 aa13.46□□□□□ -0.25
RTN4IP1-204ENST00000539449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.25
RTN4IP1-204ENST00000539449 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.26
RTN4IP1-204ENST00000539449 ZEB1P37275 1124 aaPredicted RBP13.45□□□□□ -0.26
RTN4IP1-204ENST00000539449 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
RTN4IP1-204ENST00000539449 DEPDC5O75140 1603 aa13.45□□□□□ -0.26
RTN4IP1-204ENST00000539449 MROH1Q8NDA8 1641 aa13.45□□□□□ -0.26
RTN4IP1-204ENST00000539449 EIF2AK4Q9P2K8 1649 aaKnown RBP13.45□□□□□ -0.26
RTN4IP1-204ENST00000539449 CLSPNQ9HAW4 1339 aa13.44□□□□□ -0.26
RTN4IP1-204ENST00000539449 IQGAP3Q86VI3 1631 aa13.44□□□□□ -0.26
RTN4IP1-204ENST00000539449 KIF3BO15066 747 aa13.44□□□□□ -0.26
RTN4IP1-204ENST00000539449 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
RTN4IP1-204ENST00000539449 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
RTN4IP1-204ENST00000539449 LRRC7Q96NW7 1537 aa13.43□□□□□ -0.26
RTN4IP1-204ENST00000539449 FAM135AQ9P2D6 1515 aa13.43□□□□□ -0.26
RTN4IP1-204ENST00000539449 ACIN1Q9UKV3 1341 aaKnown RBP13.42□□□□□ -0.26
RTN4IP1-204ENST00000539449 NEUROD1Q13562 356 aa13.41□□□□□ -0.26
RTN4IP1-204ENST00000539449 UPF1Q92900 1129 aaKnown RBP eCLIP13.41□□□□□ -0.26
RTN4IP1-204ENST00000539449 CEP152O94986 1710 aa13.4□□□□□ -0.26
RTN4IP1-204ENST00000539449 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
RTN4IP1-204ENST00000539449 SYNMO15061 1565 aa13.4□□□□□ -0.26
RTN4IP1-204ENST00000539449 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
RTN4IP1-204ENST00000539449 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
RTN4IP1-204ENST00000539449 E9PCH4 1651 aa13.38□□□□□ -0.27
RTN4IP1-204ENST00000539449 PRDM15P57071 1507 aaPredicted RBP13.38□□□□□ -0.27
RTN4IP1-204ENST00000539449 MED14O60244 1454 aa13.37□□□□□ -0.27
RTN4IP1-204ENST00000539449 GGT6Q6P531 493 aa13.37□□□□□ -0.27
RTN4IP1-204ENST00000539449 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
RTN4IP1-204ENST00000539449 TET3O43151 1660 aa13.36□□□□□ -0.27
RTN4IP1-204ENST00000539449 SRCAPQ6ZRS2 3230 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms