RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CEP170BQ9Y4F5 1589 aaPredicted RBP34.79■■■■□ 3.16
SCARB1-206ENST00000539320 CAMSAP1Q5T5Y3 1602 aa34.79■■■■□ 3.16
SCARB1-206ENST00000539320 PTPN23Q9H3S7 1636 aa34.79■■■■□ 3.16
SCARB1-206ENST00000539320 PTPRTO14522 1441 aa34.79■■■■□ 3.16
SCARB1-206ENST00000539320 RNF17Q9BXT8 1623 aaKnown RBP34.77■■■■□ 3.16
SCARB1-206ENST00000539320 EIF2AK4Q9P2K8 1649 aaKnown RBP34.75■■■■□ 3.15
SCARB1-206ENST00000539320 PZPP20742 1482 aa34.75■■■■□ 3.15
SCARB1-206ENST00000539320 SHANK2Q9UPX8 1470 aa34.75■■■■□ 3.15
SCARB1-206ENST00000539320 CROCC2H7BZ55 1655 aa34.74■■■■□ 3.15
SCARB1-206ENST00000539320 FGD6Q6ZV73 1430 aa34.73■■■■□ 3.15
SCARB1-206ENST00000539320 CERKQ8TCT0 537 aa34.72■■■■□ 3.15
SCARB1-206ENST00000539320 WASHC2CQ9Y4E1 1318 aa34.72■■■■□ 3.15
SCARB1-206ENST00000539320 TCOF1Q13428 1488 aaKnown RBP34.71■■■■□ 3.15
SCARB1-206ENST00000539320 ABCC5O15440 1437 aa34.7■■■■□ 3.15
SCARB1-206ENST00000539320 PLA2R1Q13018 1463 aa34.7■■■■□ 3.15
SCARB1-206ENST00000539320 DUOX2Q9NRD8 1548 aa34.69■■■■□ 3.14
SCARB1-206ENST00000539320 A2ML1A8K2U0 1454 aa34.68■■■■□ 3.14
SCARB1-206ENST00000539320 TNRQ92752 1358 aa34.67■■■■□ 3.14
SCARB1-206ENST00000539320 ZC3H13Q5T200 1668 aaKnown RBP34.66■■■■□ 3.14
SCARB1-206ENST00000539320 DNMT1P26358 1616 aaKnown RBP34.66■■■■□ 3.14
SCARB1-206ENST00000539320 ABCC3O15438 1527 aa34.65■■■■□ 3.14
SCARB1-206ENST00000539320 DAPK1P53355 1430 aa34.65■■■■□ 3.14
SCARB1-206ENST00000539320 KIF15Q9NS87 1388 aa34.64■■■■□ 3.14
SCARB1-206ENST00000539320 MROH1Q8NDA8 1641 aa34.64■■■■□ 3.14
SCARB1-206ENST00000539320 FBXO31Q5XUX0 539 aaPredicted RBP34.62■■■■□ 3.13
SCARB1-206ENST00000539320 ERBINQ96RT1 1412 aa34.59■■■■□ 3.13
SCARB1-206ENST00000539320 NCKAP5LQ9HCH0 1330 aa34.58■■■■□ 3.13
SCARB1-206ENST00000539320 PKD2Q13563 968 aa34.57■■■■□ 3.12
SCARB1-206ENST00000539320 NLRP1Q9C000 1473 aa34.54■■■■□ 3.12
SCARB1-206ENST00000539320 LTBP4Q8N2S1 1624 aa34.54■■■■□ 3.12
SCARB1-206ENST00000539320 PRDM15P57071 1507 aaPredicted RBP34.54■■■■□ 3.12
SCARB1-206ENST00000539320 CEP152O94986 1710 aa34.53■■■■□ 3.12
SCARB1-206ENST00000539320 RRP7BPQ9NSQ0 103 aa34.52■■■■□ 3.12
SCARB1-206ENST00000539320 SPATA31D1Q6ZQQ2 1576 aa34.51■■■■□ 3.12
SCARB1-206ENST00000539320 ANKRD30AQ9BXX3 1397 aa34.49■■■■□ 3.11
SCARB1-206ENST00000539320 ERVK-7P63135 1459 aa34.49■■■■□ 3.11
SCARB1-206ENST00000539320 DEPDC5O75140 1603 aa34.46■■■■□ 3.11
SCARB1-206ENST00000539320 POLR1AO95602 1720 aaPredicted RBP34.45■■■■□ 3.11
SCARB1-206ENST00000539320 CHIC2Q9UKJ5 165 aa34.44■■■■□ 3.1
SCARB1-206ENST00000539320 UGGT1Q9NYU2 1555 aa34.44■■■■□ 3.1
SCARB1-206ENST00000539320 ADGRL2O95490 1459 aa34.43■■■■□ 3.1
SCARB1-206ENST00000539320 NEURL4Q96JN8 1562 aa34.41■■■■□ 3.1
SCARB1-206ENST00000539320 IQSEC2Q5JU85 1478 aa34.41■■■■□ 3.1
SCARB1-206ENST00000539320 FAM50AQ14320 339 aaKnown RBP34.41■■■■□ 3.1
SCARB1-206ENST00000539320 ZNF335Q9H4Z2 1342 aaPredicted RBP34.39■■■■□ 3.1
SCARB1-206ENST00000539320 ARHGAP31Q2M1Z3 1444 aa34.38■■■■□ 3.09
SCARB1-206ENST00000539320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.38■■■■□ 3.09
SCARB1-206ENST00000539320 THEMISQ8N1K5 641 aaPredicted RBP34.37■■■■□ 3.09
SCARB1-206ENST00000539320 KANK1Q14678 1352 aa34.36■■■■□ 3.09
SCARB1-206ENST00000539320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.34■■■■□ 3.09
SCARB1-206ENST00000539320 CFAP65Q6ZU64 1925 aaKnown RBP34.33■■■■□ 3.09
SCARB1-206ENST00000539320 VWDEQ8N2E2 1590 aa34.32■■■■□ 3.08
SCARB1-206ENST00000539320 LMTK2Q8IWU2 1503 aa34.31■■■■□ 3.08
SCARB1-206ENST00000539320 ANKLE2Q86XL3 938 aa34.31■■■■□ 3.08
SCARB1-206ENST00000539320 MED14O60244 1454 aa34.26■■■■□ 3.07
SCARB1-206ENST00000539320 UBR1Q8IWV7 1749 aa34.25■■■■□ 3.07
SCARB1-206ENST00000539320 NPHP4O75161 1426 aaPredicted RBP34.25■■■■□ 3.07
SCARB1-206ENST00000539320 ANKRD50Q9ULJ7 1429 aa34.24■■■■□ 3.07
SCARB1-206ENST00000539320 EFCAB6Q5THR3 1501 aa34.21■■■■□ 3.07
SCARB1-206ENST00000539320 IQGAP1P46940 1657 aa34.2■■■■□ 3.07
SCARB1-206ENST00000539320 CPS1P31327 1500 aa34.18■■■■□ 3.06
SCARB1-206ENST00000539320 PIK3C2BO00750 1634 aa34.15■■■■□ 3.06
SCARB1-206ENST00000539320 SLIT1O75093 1534 aa34.14■■■■□ 3.06
SCARB1-206ENST00000539320 SCAF11Q99590 1463 aaKnown RBP34.14■■■■□ 3.06
SCARB1-206ENST00000539320 ARHGAP23Q9P227 1491 aa34.14■■■■□ 3.06
SCARB1-206ENST00000539320 ROCK1Q13464 1354 aa34.13■■■■□ 3.05
SCARB1-206ENST00000539320 SYNMO15061 1565 aa34.12■■■■□ 3.05
SCARB1-206ENST00000539320 NOS1P29475 1434 aa34.11■■■■□ 3.05
SCARB1-206ENST00000539320 UNC13BO14795 1591 aa34.11■■■■□ 3.05
SCARB1-206ENST00000539320 PPARGC1BQ86YN6 1023 aaKnown RBP34.1■■■■□ 3.05
SCARB1-206ENST00000539320 RPRD2Q5VT52 1461 aaKnown RBP34.07■■■■□ 3.05
SCARB1-206ENST00000539320 TET3O43151 1660 aa34.07■■■■□ 3.04
SCARB1-206ENST00000539320 KDM5AP29375 1690 aaKnown RBP34.07■■■■□ 3.04
SCARB1-206ENST00000539320 UBAP1LF5GYI3 381 aa34.07■■■■□ 3.04
SCARB1-206ENST00000539320 STAG3Q9UJ98 1225 aa34.03■■■■□ 3.04
SCARB1-206ENST00000539320 TMEM2Q9UHN6 1383 aa34.02■■■■□ 3.04
SCARB1-206ENST00000539320 ADGRB3O60242 1522 aa34.02■■■■□ 3.04
SCARB1-206ENST00000539320 GCC2Q8IWJ2 1684 aa34.01■■■■□ 3.04
SCARB1-206ENST00000539320 LTKP29376 864 aa34.01■■■■□ 3.03
SCARB1-206ENST00000539320 IDI1Q13907 227 aa34.01■■■■□ 3.03
SCARB1-206ENST00000539320 TXNDC2Q86VQ3 553 aa34.01■■■■□ 3.03
SCARB1-206ENST00000539320 ITGAEP38570 1179 aa33.99■■■■□ 3.03
SCARB1-206ENST00000539320 EID1Q9Y6B2 187 aa33.99■■■■□ 3.03
SCARB1-206ENST00000539320 STRCP1A6NGW2 1772 aa33.96■■■■□ 3.03
SCARB1-206ENST00000539320 IQGAP3Q86VI3 1631 aa33.95■■■■□ 3.03
SCARB1-206ENST00000539320 SLC52A1Q9NWF4 448 aa33.95■■■■□ 3.03
SCARB1-206ENST00000539320 RRBP1Q9P2E9 1410 aaKnown RBP33.93■■■■□ 3.02
SCARB1-206ENST00000539320 LRRC7Q96NW7 1537 aa33.9■■■■□ 3.02
SCARB1-206ENST00000539320 E9PCH4 1651 aa33.89■■■■□ 3.02
SCARB1-206ENST00000539320 TOM1O60784 492 aa33.87■■■■□ 3.01
SCARB1-206ENST00000539320 NUP155O75694 1391 aa33.85■■■■□ 3.01
SCARB1-206ENST00000539320 SCAF1Q9H7N4 1312 aaKnown RBP33.82■■■■□ 3.01
SCARB1-206ENST00000539320 MYO5BQ9ULV0 1848 aa33.81■■■■□ 3
SCARB1-206ENST00000539320 TMEM131LA2VDJ0 1609 aa33.8■■■■□ 3
SCARB1-206ENST00000539320 ALKQ9UM73 1620 aa33.8■■■■□ 3
SCARB1-206ENST00000539320 PIP4K2BP78356 416 aa33.8■■■■□ 3
SCARB1-206ENST00000539320 ZFYVE9O95405 1425 aa33.79■■■■□ 3
SCARB1-206ENST00000539320 DISP3Q9P2K9 1392 aa33.78■■■■□ 3
SCARB1-206ENST00000539320 RIMS2Q9UQ26 1411 aa33.75■■■□□ 2.99
SCARB1-206ENST00000539320 SLC26A8Q96RN1 970 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms