RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 ADGRL2O95490 1459 aa22.69■■□□□ 1.22
C2CD3-213ENST00000539061 CAMSAP2Q08AD1 1489 aa22.68■■□□□ 1.22
C2CD3-213ENST00000539061 PLIN1O60240 522 aa22.68■■□□□ 1.22
C2CD3-213ENST00000539061 CRBNQ96SW2 442 aa22.68■■□□□ 1.22
C2CD3-213ENST00000539061 ADGBQ8N7X0 1667 aa22.67■■□□□ 1.22
C2CD3-213ENST00000539061 BRPF3Q9ULD4 1205 aa22.67■■□□□ 1.22
C2CD3-213ENST00000539061 E9PCH4 1651 aa22.67■■□□□ 1.22
C2CD3-213ENST00000539061 ANKRD30AQ9BXX3 1397 aa22.66■■□□□ 1.22
C2CD3-213ENST00000539061 DAXXQ9UER7 740 aaPredicted RBP22.66■■□□□ 1.22
C2CD3-213ENST00000539061 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.66■■□□□ 1.22
C2CD3-213ENST00000539061 KDM2AQ9Y2K7 1162 aa22.65■■□□□ 1.22
C2CD3-213ENST00000539061 NUP153P49790 1475 aaKnown RBP22.65■■□□□ 1.22
C2CD3-213ENST00000539061 INSRP06213 1382 aa22.64■■□□□ 1.22
C2CD3-213ENST00000539061 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
C2CD3-213ENST00000539061 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
C2CD3-213ENST00000539061 ANKRD50Q9ULJ7 1429 aa22.63■■□□□ 1.21
C2CD3-213ENST00000539061 SKAP1Q86WV1 359 aa22.62■■□□□ 1.21
C2CD3-213ENST00000539061 NUP155O75694 1391 aa22.6■■□□□ 1.21
C2CD3-213ENST00000539061 DCAF11Q8TEB1 546 aa22.6■■□□□ 1.21
C2CD3-213ENST00000539061 FRAT1Q92837 279 aaPredicted RBP22.6■■□□□ 1.21
C2CD3-213ENST00000539061 ZNF777Q9ULD5 760 aaPredicted RBP22.59■■□□□ 1.21
C2CD3-213ENST00000539061 TROQ12816 1431 aaPredicted RBP22.59■■□□□ 1.21
C2CD3-213ENST00000539061 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
C2CD3-213ENST00000539061 ZMYM4Q5VZL5 1548 aa22.59■■□□□ 1.21
C2CD3-213ENST00000539061 KIAA0586Q9BVV6 1533 aa22.59■■□□□ 1.21
C2CD3-213ENST00000539061 PER1O15534 1290 aaPredicted RBP22.58■■□□□ 1.21
C2CD3-213ENST00000539061 SLC4A3P48751 1232 aa22.58■■□□□ 1.21
C2CD3-213ENST00000539061 BLMP54132 1417 aaPredicted RBP22.58■■□□□ 1.2
C2CD3-213ENST00000539061 GPATCH8Q9UKJ3 1502 aaKnown RBP22.58■■□□□ 1.2
C2CD3-213ENST00000539061 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
C2CD3-213ENST00000539061 ITSN2Q9NZM3 1697 aa22.57■■□□□ 1.2
C2CD3-213ENST00000539061 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
C2CD3-213ENST00000539061 CENPQQ7L2Z9 268 aaPredicted RBP22.57■■□□□ 1.2
C2CD3-213ENST00000539061 RAPGEF6Q8TEU7 1601 aa22.56■■□□□ 1.2
C2CD3-213ENST00000539061 PLEKHH2Q8IVE3 1493 aa22.56■■□□□ 1.2
C2CD3-213ENST00000539061 FAM161AQ3B820 660 aa22.55■■□□□ 1.2
C2CD3-213ENST00000539061 CROCC2H7BZ55 1655 aa22.55■■□□□ 1.2
C2CD3-213ENST00000539061 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
C2CD3-213ENST00000539061 DISP1Q96F81 1524 aa22.54■■□□□ 1.2
C2CD3-213ENST00000539061 C20orf194Q5TEA3 1177 aa22.52■■□□□ 1.2
C2CD3-213ENST00000539061 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
C2CD3-213ENST00000539061 C8orf34Q49A92 452 aa22.5■■□□□ 1.19
C2CD3-213ENST00000539061 CC2D1BQ5T0F9 858 aaKnown RBP22.5■■□□□ 1.19
C2CD3-213ENST00000539061 KDM5DQ9BY66 1539 aa22.49■■□□□ 1.19
C2CD3-213ENST00000539061 UBE2Q2Q8WVN8 375 aa22.46■■□□□ 1.19
C2CD3-213ENST00000539061 FRAT2O75474 233 aaPredicted RBP22.45■■□□□ 1.18
C2CD3-213ENST00000539061 C9orf84Q5VXU9 1444 aa22.44■■□□□ 1.18
C2CD3-213ENST00000539061 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.44■■□□□ 1.18
C2CD3-213ENST00000539061 PRAG1Q86YV5 1406 aa22.44■■□□□ 1.18
C2CD3-213ENST00000539061 SHANK2Q9UPX8 1470 aa22.44■■□□□ 1.18
C2CD3-213ENST00000539061 PTPRGP23470 1445 aa22.43■■□□□ 1.18
C2CD3-213ENST00000539061 ADCY10Q96PN6 1610 aa22.43■■□□□ 1.18
C2CD3-213ENST00000539061 PANK3Q9H999 370 aa22.43■■□□□ 1.18
C2CD3-213ENST00000539061 COL17A1Q9UMD9 1497 aaPredicted RBP22.43■■□□□ 1.18
C2CD3-213ENST00000539061 NUP160Q12769 1436 aa22.42■■□□□ 1.18
C2CD3-213ENST00000539061 TRPM1Q7Z4N2 1603 aa22.41■■□□□ 1.18
C2CD3-213ENST00000539061 EIF5BO60841 1220 aaKnown RBP22.41■■□□□ 1.18
C2CD3-213ENST00000539061 TSPY4P0CV99 314 aa22.41■■□□□ 1.18
C2CD3-213ENST00000539061 TSPY10P0CW01 314 aa22.41■■□□□ 1.18
C2CD3-213ENST00000539061 JPH4Q96JJ6 628 aa22.41■■□□□ 1.18
C2CD3-213ENST00000539061 DUSP27Q5VZP5 1158 aa22.41■■□□□ 1.18
C2CD3-213ENST00000539061 FAM43AQ8N2R8 423 aa22.41■■□□□ 1.18
C2CD3-213ENST00000539061 ADAMTS8Q9UP79 889 aa22.41■■□□□ 1.18
C2CD3-213ENST00000539061 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
C2CD3-213ENST00000539061 NBPF1Q3BBV0 1214 aa22.4■■□□□ 1.18
C2CD3-213ENST00000539061 TESK2Q96S53 571 aa22.38■■□□□ 1.17
C2CD3-213ENST00000539061 RSPH6AQ9H0K4 717 aa22.38■■□□□ 1.17
C2CD3-213ENST00000539061 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
C2CD3-213ENST00000539061 RGS3P49796 1198 aa22.37■■□□□ 1.17
C2CD3-213ENST00000539061 CHD1O14646 1710 aa22.36■■□□□ 1.17
C2CD3-213ENST00000539061 GOLGA2Q08379 1002 aa22.36■■□□□ 1.17
C2CD3-213ENST00000539061 CCDC144AA2RUR9 1427 aa22.35■■□□□ 1.17
C2CD3-213ENST00000539061 TMF1P82094 1093 aa22.35■■□□□ 1.17
C2CD3-213ENST00000539061 PLEKHH1Q9ULM0 1364 aa22.35■■□□□ 1.17
C2CD3-213ENST00000539061 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
C2CD3-213ENST00000539061 WDR43Q15061 677 aaKnown RBP eCLIP22.34■■□□□ 1.17
C2CD3-213ENST00000539061 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
C2CD3-213ENST00000539061 RGL3Q3MIN7 710 aa22.33■■□□□ 1.17
C2CD3-213ENST00000539061 CDC42BPAQ5VT25 1732 aa22.33■■□□□ 1.17
C2CD3-213ENST00000539061 ZNF521Q96K83 1311 aa22.33■■□□□ 1.16
C2CD3-213ENST00000539061 PRDM15P57071 1507 aaPredicted RBP22.31■■□□□ 1.16
C2CD3-213ENST00000539061 LAMC1P11047 1609 aa22.31■■□□□ 1.16
C2CD3-213ENST00000539061 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
C2CD3-213ENST00000539061 FAM135AQ9P2D6 1515 aa22.29■■□□□ 1.16
C2CD3-213ENST00000539061 EIF3AQ14152 1382 aaKnown RBP22.29■■□□□ 1.16
C2CD3-213ENST00000539061 SLFN5Q08AF3 891 aa22.28■■□□□ 1.16
C2CD3-213ENST00000539061 PPP2R1AP30153 589 aa22.28■■□□□ 1.16
C2CD3-213ENST00000539061 A2MP01023 1474 aa22.26■■□□□ 1.15
C2CD3-213ENST00000539061 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
C2CD3-213ENST00000539061 KNSTRNQ9Y448 316 aa22.26■■□□□ 1.15
C2CD3-213ENST00000539061 HNRNPMP52272 730 aaKnown RBP eCLIP22.25■■□□□ 1.15
C2CD3-213ENST00000539061 BECN1Q14457 450 aa22.24■■□□□ 1.15
C2CD3-213ENST00000539061 CARMIL2Q6F5E8 1435 aa22.24■■□□□ 1.15
C2CD3-213ENST00000539061 TRMT2AQ8IZ69 625 aaKnown RBP22.23■■□□□ 1.15
C2CD3-213ENST00000539061 USP19O94966 1318 aa22.23■■□□□ 1.15
C2CD3-213ENST00000539061 CLASP1Q7Z460 1538 aa22.22■■□□□ 1.15
C2CD3-213ENST00000539061 POGKQ9P215 609 aa22.22■■□□□ 1.15
C2CD3-213ENST00000539061 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
C2CD3-213ENST00000539061 EIF2AK4Q9P2K8 1649 aaKnown RBP22.21■■□□□ 1.15
C2CD3-213ENST00000539061 L1TD1Q5T7N2 865 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms