RNA–Protein interactions for RNA: ENST00000538361.1

C2CD3-211, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-211ENST00000538361 KDM5DQ9BY66 1539 aa20.59■□□□□ 0.89
C2CD3-211ENST00000538361 ABCC5O15440 1437 aa20.59■□□□□ 0.89
C2CD3-211ENST00000538361 PTPRKQ15262 1439 aa20.59■□□□□ 0.89
C2CD3-211ENST00000538361 DNMT1P26358 1616 aaKnown RBP20.58■□□□□ 0.89
C2CD3-211ENST00000538361 EIF2AK4Q9P2K8 1649 aaKnown RBP20.58■□□□□ 0.89
C2CD3-211ENST00000538361 DUOX2Q9NRD8 1548 aa20.58■□□□□ 0.88
C2CD3-211ENST00000538361 DAPK1P53355 1430 aa20.57■□□□□ 0.88
C2CD3-211ENST00000538361 STRCQ7RTU9 1775 aa20.56■□□□□ 0.88
C2CD3-211ENST00000538361 RNF17Q9BXT8 1623 aaKnown RBP20.56■□□□□ 0.88
C2CD3-211ENST00000538361 ILDR1Q86SU0 546 aaPredicted RBP20.55■□□□□ 0.88
C2CD3-211ENST00000538361 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
C2CD3-211ENST00000538361 RRP7BPQ9NSQ0 103 aa20.54■□□□□ 0.88
C2CD3-211ENST00000538361 FAM50AQ14320 339 aaKnown RBP20.53■□□□□ 0.88
C2CD3-211ENST00000538361 MYO3AQ8NEV4 1616 aa20.53■□□□□ 0.88
C2CD3-211ENST00000538361 PZPP20742 1482 aa20.52■□□□□ 0.88
C2CD3-211ENST00000538361 ANKRD30AQ9BXX3 1397 aa20.52■□□□□ 0.88
C2CD3-211ENST00000538361 ZC3H13Q5T200 1668 aaKnown RBP20.51■□□□□ 0.87
C2CD3-211ENST00000538361 ERBINQ96RT1 1412 aa20.51■□□□□ 0.87
C2CD3-211ENST00000538361 ZNF142P52746 1687 aaPredicted RBP20.51■□□□□ 0.87
C2CD3-211ENST00000538361 CHIC2Q9UKJ5 165 aa20.5■□□□□ 0.87
C2CD3-211ENST00000538361 CEP170BQ9Y4F5 1589 aaPredicted RBP20.5■□□□□ 0.87
C2CD3-211ENST00000538361 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
C2CD3-211ENST00000538361 FBXO31Q5XUX0 539 aaPredicted RBP20.49■□□□□ 0.87
C2CD3-211ENST00000538361 TNRQ92752 1358 aa20.48■□□□□ 0.87
C2CD3-211ENST00000538361 NCOA1Q15788 1441 aa20.48■□□□□ 0.87
C2CD3-211ENST00000538361 ABCC3O15438 1527 aa20.48■□□□□ 0.87
C2CD3-211ENST00000538361 PTPRTO14522 1441 aa20.47■□□□□ 0.87
C2CD3-211ENST00000538361 A2ML1A8K2U0 1454 aa20.46■□□□□ 0.87
C2CD3-211ENST00000538361 MROH1Q8NDA8 1641 aa20.45■□□□□ 0.87
C2CD3-211ENST00000538361 FBXO41Q8TF61 875 aa20.45■□□□□ 0.86
C2CD3-211ENST00000538361 PLA2R1Q13018 1463 aa20.44■□□□□ 0.86
C2CD3-211ENST00000538361 PKD2Q13563 968 aa20.43■□□□□ 0.86
C2CD3-211ENST00000538361 CEP152O94986 1710 aa20.43■□□□□ 0.86
C2CD3-211ENST00000538361 KANK1Q14678 1352 aa20.43■□□□□ 0.86
C2CD3-211ENST00000538361 ADGRL2O95490 1459 aa20.43■□□□□ 0.86
C2CD3-211ENST00000538361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
C2CD3-211ENST00000538361 PRDM15P57071 1507 aaPredicted RBP20.42■□□□□ 0.86
C2CD3-211ENST00000538361 CERKQ8TCT0 537 aa20.41■□□□□ 0.86
C2CD3-211ENST00000538361 NLRP1Q9C000 1473 aa20.41■□□□□ 0.86
C2CD3-211ENST00000538361 DEPDC5O75140 1603 aa20.41■□□□□ 0.86
C2CD3-211ENST00000538361 NCKAP5LQ9HCH0 1330 aa20.4■□□□□ 0.86
C2CD3-211ENST00000538361 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.85
C2CD3-211ENST00000538361 CFAP65Q6ZU64 1925 aaKnown RBP20.38■□□□□ 0.85
C2CD3-211ENST00000538361 THEMISQ8N1K5 641 aaPredicted RBP20.38■□□□□ 0.85
C2CD3-211ENST00000538361 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
C2CD3-211ENST00000538361 ERVK-7P63135 1459 aa20.37■□□□□ 0.85
C2CD3-211ENST00000538361 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
C2CD3-211ENST00000538361 UGGT1Q9NYU2 1555 aa20.35■□□□□ 0.85
C2CD3-211ENST00000538361 ANKRD50Q9ULJ7 1429 aa20.35■□□□□ 0.85
C2CD3-211ENST00000538361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.34■□□□□ 0.85
C2CD3-211ENST00000538361 ANKLE2Q86XL3 938 aa20.32■□□□□ 0.84
C2CD3-211ENST00000538361 POLR1AO95602 1720 aaPredicted RBP20.32■□□□□ 0.84
C2CD3-211ENST00000538361 ROCK1Q13464 1354 aa20.32■□□□□ 0.84
C2CD3-211ENST00000538361 LMTK2Q8IWU2 1503 aa20.31■□□□□ 0.84
C2CD3-211ENST00000538361 VWDEQ8N2E2 1590 aa20.3■□□□□ 0.84
C2CD3-211ENST00000538361 ITGAEP38570 1179 aa20.29■□□□□ 0.84
C2CD3-211ENST00000538361 LTBP4Q8N2S1 1624 aa20.27■□□□□ 0.84
C2CD3-211ENST00000538361 EFCAB6Q5THR3 1501 aa20.25■□□□□ 0.83
C2CD3-211ENST00000538361 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
C2CD3-211ENST00000538361 NEURL4Q96JN8 1562 aa20.24■□□□□ 0.83
C2CD3-211ENST00000538361 ZNF335Q9H4Z2 1342 aaPredicted RBP20.24■□□□□ 0.83
C2CD3-211ENST00000538361 RRBP1Q9P2E9 1410 aaKnown RBP20.22■□□□□ 0.83
C2CD3-211ENST00000538361 STAG3Q9UJ98 1225 aa20.22■□□□□ 0.83
C2CD3-211ENST00000538361 MED14O60244 1454 aa20.22■□□□□ 0.83
C2CD3-211ENST00000538361 IQSEC2Q5JU85 1478 aa20.22■□□□□ 0.83
C2CD3-211ENST00000538361 UNC13BO14795 1591 aa20.21■□□□□ 0.83
C2CD3-211ENST00000538361 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
C2CD3-211ENST00000538361 NPHP4O75161 1426 aaPredicted RBP20.2■□□□□ 0.82
C2CD3-211ENST00000538361 TET3O43151 1660 aa20.2■□□□□ 0.82
C2CD3-211ENST00000538361 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
C2CD3-211ENST00000538361 PIK3C2BO00750 1634 aa20.19■□□□□ 0.82
C2CD3-211ENST00000538361 NOS1P29475 1434 aa20.19■□□□□ 0.82
C2CD3-211ENST00000538361 IDI1Q13907 227 aa20.18■□□□□ 0.82
C2CD3-211ENST00000538361 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
C2CD3-211ENST00000538361 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
C2CD3-211ENST00000538361 IQGAP1P46940 1657 aa20.18■□□□□ 0.82
C2CD3-211ENST00000538361 GCC2Q8IWJ2 1684 aa20.18■□□□□ 0.82
C2CD3-211ENST00000538361 TXNDC2Q86VQ3 553 aa20.16■□□□□ 0.82
C2CD3-211ENST00000538361 SCAF11Q99590 1463 aaKnown RBP20.16■□□□□ 0.82
C2CD3-211ENST00000538361 SLIT1O75093 1534 aa20.16■□□□□ 0.82
C2CD3-211ENST00000538361 SYNMO15061 1565 aa20.16■□□□□ 0.82
C2CD3-211ENST00000538361 ARHGAP23Q9P227 1491 aa20.15■□□□□ 0.82
C2CD3-211ENST00000538361 IQGAP3Q86VI3 1631 aa20.14■□□□□ 0.81
C2CD3-211ENST00000538361 NUP155O75694 1391 aa20.14■□□□□ 0.81
C2CD3-211ENST00000538361 CPS1P31327 1500 aa20.13■□□□□ 0.81
C2CD3-211ENST00000538361 TMEM2Q9UHN6 1383 aa20.12■□□□□ 0.81
C2CD3-211ENST00000538361 LTKP29376 864 aa20.12■□□□□ 0.81
C2CD3-211ENST00000538361 E9PCH4 1651 aa20.1■□□□□ 0.81
C2CD3-211ENST00000538361 ADGRB3O60242 1522 aa20.09■□□□□ 0.81
C2CD3-211ENST00000538361 UBAP1LF5GYI3 381 aa20.06■□□□□ 0.8
C2CD3-211ENST00000538361 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
C2CD3-211ENST00000538361 NAIPQ13075 1403 aa20.06■□□□□ 0.8
C2CD3-211ENST00000538361 MYO5BQ9ULV0 1848 aa20.02■□□□□ 0.8
C2CD3-211ENST00000538361 CHGAP10645 457 aaKnown RBP20.02■□□□□ 0.8
C2CD3-211ENST00000538361 TMEM131LA2VDJ0 1609 aa20.02■□□□□ 0.79
C2CD3-211ENST00000538361 HFM1A2PYH4 1435 aa20.02■□□□□ 0.79
C2CD3-211ENST00000538361 TOM1O60784 492 aa20.01■□□□□ 0.79
C2CD3-211ENST00000538361 BCANQ96GW7 911 aa20■□□□□ 0.79
C2CD3-211ENST00000538361 STRCP1A6NGW2 1772 aa20■□□□□ 0.79
C2CD3-211ENST00000538361 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms