RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 TNRQ92752 1358 aa16.44■□□□□ 0.22
VPS37C-204ENST00000538036 EHBP1L1Q8N3D4 1523 aa16.44■□□□□ 0.22
VPS37C-204ENST00000538036 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
VPS37C-204ENST00000538036 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
VPS37C-204ENST00000538036 THEMISQ8N1K5 641 aaPredicted RBP16.43■□□□□ 0.22
VPS37C-204ENST00000538036 DNMT1P26358 1616 aaKnown RBP16.43■□□□□ 0.22
VPS37C-204ENST00000538036 WASHC2CQ9Y4E1 1318 aa16.43■□□□□ 0.22
VPS37C-204ENST00000538036 CPS1P31327 1500 aa16.42■□□□□ 0.22
VPS37C-204ENST00000538036 FBXO31Q5XUX0 539 aaPredicted RBP16.42■□□□□ 0.22
VPS37C-204ENST00000538036 PZPP20742 1482 aa16.42■□□□□ 0.22
VPS37C-204ENST00000538036 CCDC141Q6ZP82 1450 aa16.4■□□□□ 0.22
VPS37C-204ENST00000538036 SHANK2Q9UPX8 1470 aa16.4■□□□□ 0.22
VPS37C-204ENST00000538036 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
VPS37C-204ENST00000538036 MIA2Q96PC5 1412 aa16.39■□□□□ 0.21
VPS37C-204ENST00000538036 TSPY4P0CV99 314 aa16.39■□□□□ 0.21
VPS37C-204ENST00000538036 TSPY10P0CW01 314 aa16.39■□□□□ 0.21
VPS37C-204ENST00000538036 NLRP1Q9C000 1473 aa16.38■□□□□ 0.21
VPS37C-204ENST00000538036 HSPA1LP34931 641 aa16.38■□□□□ 0.21
VPS37C-204ENST00000538036 PIP4K2BP78356 416 aa16.37■□□□□ 0.21
VPS37C-204ENST00000538036 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
VPS37C-204ENST00000538036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.21
VPS37C-204ENST00000538036 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
VPS37C-204ENST00000538036 MED14O60244 1454 aa16.35■□□□□ 0.21
VPS37C-204ENST00000538036 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
VPS37C-204ENST00000538036 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
VPS37C-204ENST00000538036 NPHP4O75161 1426 aaPredicted RBP16.33■□□□□ 0.2
VPS37C-204ENST00000538036 UGGT1Q9NYU2 1555 aa16.33■□□□□ 0.2
VPS37C-204ENST00000538036 POLR1AO95602 1720 aaPredicted RBP16.33■□□□□ 0.2
VPS37C-204ENST00000538036 DEPDC5O75140 1603 aa16.31■□□□□ 0.2
VPS37C-204ENST00000538036 ARHGEF5Q12774 1597 aa16.31■□□□□ 0.2
VPS37C-204ENST00000538036 VWDEQ8N2E2 1590 aa16.3■□□□□ 0.2
VPS37C-204ENST00000538036 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
VPS37C-204ENST00000538036 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
VPS37C-204ENST00000538036 ABCC3O15438 1527 aa16.24■□□□□ 0.19
VPS37C-204ENST00000538036 RNF17Q9BXT8 1623 aaKnown RBP16.24■□□□□ 0.19
VPS37C-204ENST00000538036 IQGAP1P46940 1657 aa16.23■□□□□ 0.19
VPS37C-204ENST00000538036 ERVK-7P63135 1459 aa16.22■□□□□ 0.19
VPS37C-204ENST00000538036 MAST1Q9Y2H9 1570 aa16.22■□□□□ 0.19
VPS37C-204ENST00000538036 ZC3H13Q5T200 1668 aaKnown RBP16.22■□□□□ 0.19
VPS37C-204ENST00000538036 LRRC7Q96NW7 1537 aa16.22■□□□□ 0.19
VPS37C-204ENST00000538036 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
VPS37C-204ENST00000538036 ALKQ9UM73 1620 aa16.21■□□□□ 0.19
VPS37C-204ENST00000538036 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
VPS37C-204ENST00000538036 SCAF11Q99590 1463 aaKnown RBP16.19■□□□□ 0.18
VPS37C-204ENST00000538036 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
VPS37C-204ENST00000538036 MYOM3Q5VTT5 1437 aa16.19■□□□□ 0.18
VPS37C-204ENST00000538036 EID1Q9Y6B2 187 aa16.18■□□□□ 0.18
VPS37C-204ENST00000538036 ARHGAP31Q2M1Z3 1444 aa16.18■□□□□ 0.18
VPS37C-204ENST00000538036 VPS8Q8N3P4 1428 aa16.18■□□□□ 0.18
VPS37C-204ENST00000538036 SYNMO15061 1565 aa16.17■□□□□ 0.18
VPS37C-204ENST00000538036 MAP3K1Q13233 1512 aa16.17■□□□□ 0.18
VPS37C-204ENST00000538036 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
VPS37C-204ENST00000538036 LTKP29376 864 aa16.16■□□□□ 0.18
VPS37C-204ENST00000538036 ARHGAP23Q9P227 1491 aa16.16■□□□□ 0.18
VPS37C-204ENST00000538036 SLIT1O75093 1534 aa16.15■□□□□ 0.18
VPS37C-204ENST00000538036 MROH1Q8NDA8 1641 aa16.15■□□□□ 0.18
VPS37C-204ENST00000538036 KANK4Q5T7N3 995 aaPredicted RBP16.14■□□□□ 0.17
VPS37C-204ENST00000538036 STRCP1A6NGW2 1772 aa16.13■□□□□ 0.17
VPS37C-204ENST00000538036 UBR1Q8IWV7 1749 aa16.13■□□□□ 0.17
VPS37C-204ENST00000538036 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
VPS37C-204ENST00000538036 ERBINQ96RT1 1412 aa16.12■□□□□ 0.17
VPS37C-204ENST00000538036 STAG3Q9UJ98 1225 aa16.11■□□□□ 0.17
VPS37C-204ENST00000538036 KANK1Q14678 1352 aa16.11■□□□□ 0.17
VPS37C-204ENST00000538036 TMEM2Q9UHN6 1383 aa16.11■□□□□ 0.17
VPS37C-204ENST00000538036 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
VPS37C-204ENST00000538036 RRP7BPQ9NSQ0 103 aa16.1■□□□□ 0.17
VPS37C-204ENST00000538036 FAM135BQ49AJ0 1406 aa16.1■□□□□ 0.17
VPS37C-204ENST00000538036 PRDM15P57071 1507 aaPredicted RBP16.09■□□□□ 0.17
VPS37C-204ENST00000538036 KCNA6P17658 529 aa16.08■□□□□ 0.16
VPS37C-204ENST00000538036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
VPS37C-204ENST00000538036 ABCC5O15440 1437 aa16.08■□□□□ 0.16
VPS37C-204ENST00000538036 CEP152O94986 1710 aa16.08■□□□□ 0.16
VPS37C-204ENST00000538036 IDI1Q13907 227 aa16.06■□□□□ 0.16
VPS37C-204ENST00000538036 RGS17Q9UGC6 210 aaPredicted RBP16.06■□□□□ 0.16
VPS37C-204ENST00000538036 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
VPS37C-204ENST00000538036 APLP2Q06481 763 aa16.05■□□□□ 0.16
VPS37C-204ENST00000538036 CFAP65Q6ZU64 1925 aaKnown RBP16.05■□□□□ 0.16
VPS37C-204ENST00000538036 LOC105371045A0A1W2PR82 267 aa16.04■□□□□ 0.16
VPS37C-204ENST00000538036 ANKRD30AQ9BXX3 1397 aa16.03■□□□□ 0.16
VPS37C-204ENST00000538036 KDM5AP29375 1690 aaKnown RBP16.03■□□□□ 0.16
VPS37C-204ENST00000538036 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
VPS37C-204ENST00000538036 SLC52A1Q9NWF4 448 aa16.03■□□□□ 0.16
VPS37C-204ENST00000538036 EFCAB6Q5THR3 1501 aa16.03■□□□□ 0.16
VPS37C-204ENST00000538036 LMTK2Q8IWU2 1503 aa16.03■□□□□ 0.16
VPS37C-204ENST00000538036 DAPK1P53355 1430 aa16.02■□□□□ 0.16
VPS37C-204ENST00000538036 PIK3C2BO00750 1634 aa16.02■□□□□ 0.16
VPS37C-204ENST00000538036 SLC26A8Q96RN1 970 aa16■□□□□ 0.15
VPS37C-204ENST00000538036 TET3O43151 1660 aa15.99■□□□□ 0.15
VPS37C-204ENST00000538036 XIRP1Q702N8 1843 aaKnown RBP15.99■□□□□ 0.15
VPS37C-204ENST00000538036 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
VPS37C-204ENST00000538036 HDGFP51858 240 aaKnown RBP15.99■□□□□ 0.15
VPS37C-204ENST00000538036 NOS1P29475 1434 aa15.99■□□□□ 0.15
VPS37C-204ENST00000538036 CROCC2H7BZ55 1655 aa15.99■□□□□ 0.15
VPS37C-204ENST00000538036 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
VPS37C-204ENST00000538036 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
VPS37C-204ENST00000538036 CHIC2Q9UKJ5 165 aa15.97■□□□□ 0.15
VPS37C-204ENST00000538036 POTEAQ6S8J7 498 aa15.96■□□□□ 0.15
VPS37C-204ENST00000538036 BCANQ96GW7 911 aa15.96■□□□□ 0.15
VPS37C-204ENST00000538036 SLAIN2Q9P270 581 aa15.96■□□□□ 0.15
VPS37C-204ENST00000538036 MSH6P52701 1360 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms