RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
CHD4-207ENST00000537634 MAST1Q9Y2H9 1570 aa15.28■□□□□ 0.04
CHD4-207ENST00000537634 KANK4Q5T7N3 995 aaPredicted RBP15.28■□□□□ 0.04
CHD4-207ENST00000537634 A2ML1A8K2U0 1454 aa15.27■□□□□ 0.04
CHD4-207ENST00000537634 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
CHD4-207ENST00000537634 LTBP4Q8N2S1 1624 aa15.27■□□□□ 0.03
CHD4-207ENST00000537634 PZPP20742 1482 aa15.27■□□□□ 0.03
CHD4-207ENST00000537634 NCKAP5LQ9HCH0 1330 aa15.26■□□□□ 0.03
CHD4-207ENST00000537634 WASHC2CQ9Y4E1 1318 aa15.26■□□□□ 0.03
CHD4-207ENST00000537634 PKD2Q13563 968 aa15.26■□□□□ 0.03
CHD4-207ENST00000537634 TCOF1Q13428 1488 aaKnown RBP15.26■□□□□ 0.03
CHD4-207ENST00000537634 TNRQ92752 1358 aa15.25■□□□□ 0.03
CHD4-207ENST00000537634 DNMT1P26358 1616 aaKnown RBP15.25■□□□□ 0.03
CHD4-207ENST00000537634 RNF17Q9BXT8 1623 aaKnown RBP15.25■□□□□ 0.03
CHD4-207ENST00000537634 EIF2AK4Q9P2K8 1649 aaKnown RBP15.25■□□□□ 0.03
CHD4-207ENST00000537634 APLP2Q06481 763 aa15.24■□□□□ 0.03
CHD4-207ENST00000537634 IQSEC2Q5JU85 1478 aa15.24■□□□□ 0.03
CHD4-207ENST00000537634 ZC3H13Q5T200 1668 aaKnown RBP15.24■□□□□ 0.03
CHD4-207ENST00000537634 FBXO31Q5XUX0 539 aaPredicted RBP15.22■□□□□ 0.03
CHD4-207ENST00000537634 POLR1AO95602 1720 aaPredicted RBP15.22■□□□□ 0.03
CHD4-207ENST00000537634 CROCC2H7BZ55 1655 aa15.21■□□□□ 0.03
CHD4-207ENST00000537634 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
CHD4-207ENST00000537634 ABCC3O15438 1527 aa15.2■□□□□ 0.02
CHD4-207ENST00000537634 NLRP1Q9C000 1473 aa15.2■□□□□ 0.02
CHD4-207ENST00000537634 ZNF335Q9H4Z2 1342 aaPredicted RBP15.19■□□□□ 0.02
CHD4-207ENST00000537634 DUOX2Q9NRD8 1548 aa15.19■□□□□ 0.02
CHD4-207ENST00000537634 SHANK2Q9UPX8 1470 aa15.19■□□□□ 0.02
CHD4-207ENST00000537634 MROH1Q8NDA8 1641 aa15.18■□□□□ 0.02
CHD4-207ENST00000537634 CEP152O94986 1710 aa15.17■□□□□ 0.02
CHD4-207ENST00000537634 UGGT1Q9NYU2 1555 aa15.17■□□□□ 0.02
CHD4-207ENST00000537634 NEURL4Q96JN8 1562 aa15.16■□□□□ 0.02
CHD4-207ENST00000537634 KIF15Q9NS87 1388 aa15.16■□□□□ 0.02
CHD4-207ENST00000537634 SPATA31D1Q6ZQQ2 1576 aa15.15■□□□□ 0.02
CHD4-207ENST00000537634 ABCC5O15440 1437 aa15.15■□□□□ 0.02
CHD4-207ENST00000537634 FGD6Q6ZV73 1430 aa15.15■□□□□ 0.02
CHD4-207ENST00000537634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHD4-207ENST00000537634 THEMISQ8N1K5 641 aaPredicted RBP15.14■□□□□ 0.01
CHD4-207ENST00000537634 DAPK1P53355 1430 aa15.14■□□□□ 0.01
CHD4-207ENST00000537634 ERBINQ96RT1 1412 aa15.14■□□□□ 0.01
CHD4-207ENST00000537634 ERVK-7P63135 1459 aa15.14■□□□□ 0.01
CHD4-207ENST00000537634 PRDM15P57071 1507 aaPredicted RBP15.13■□□□□ 0.01
CHD4-207ENST00000537634 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
CHD4-207ENST00000537634 DEPDC5O75140 1603 aa15.13■□□□□ 0.01
CHD4-207ENST00000537634 RRP7BPQ9NSQ0 103 aa15.11■□□□□ 0.01
CHD4-207ENST00000537634 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
CHD4-207ENST00000537634 UBAP1LF5GYI3 381 aa15.1■□□□□ 0.01
CHD4-207ENST00000537634 CPS1P31327 1500 aa15.1■□□□□ 0.01
CHD4-207ENST00000537634 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
CHD4-207ENST00000537634 ANKRD30AQ9BXX3 1397 aa15.09■□□□□ 0.01
CHD4-207ENST00000537634 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
CHD4-207ENST00000537634 MED14O60244 1454 aa15.08■□□□□ 0.01
CHD4-207ENST00000537634 UBR1Q8IWV7 1749 aa15.08■□□□□ 0
CHD4-207ENST00000537634 KANK1Q14678 1352 aa15.08■□□□□ 0
CHD4-207ENST00000537634 DISP3Q9P2K9 1392 aa15.07■□□□□ 0
CHD4-207ENST00000537634 ARHGAP31Q2M1Z3 1444 aa15.07■□□□□ 0
CHD4-207ENST00000537634 VWDEQ8N2E2 1590 aa15.07■□□□□ 0
CHD4-207ENST00000537634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 0
CHD4-207ENST00000537634 CHIC2Q9UKJ5 165 aa15.06■□□□□ 0
CHD4-207ENST00000537634 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
CHD4-207ENST00000537634 ADGRL2O95490 1459 aa15.02■□□□□ -0
CHD4-207ENST00000537634 SCAF11Q99590 1463 aaKnown RBP15.02■□□□□ -0
CHD4-207ENST00000537634 PIK3C2BO00750 1634 aa15.02□□□□□ -0.01
CHD4-207ENST00000537634 LMTK2Q8IWU2 1503 aa15.02□□□□□ -0.01
CHD4-207ENST00000537634 SLIT1O75093 1534 aa15.01□□□□□ -0.01
CHD4-207ENST00000537634 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
CHD4-207ENST00000537634 SYNMO15061 1565 aa15□□□□□ -0.01
CHD4-207ENST00000537634 TOM1O60784 492 aa15□□□□□ -0.01
CHD4-207ENST00000537634 ARHGAP23Q9P227 1491 aa15□□□□□ -0.01
CHD4-207ENST00000537634 EFCAB6Q5THR3 1501 aa14.99□□□□□ -0.01
CHD4-207ENST00000537634 STRCP1A6NGW2 1772 aa14.98□□□□□ -0.01
CHD4-207ENST00000537634 KDM5AP29375 1690 aaKnown RBP14.98□□□□□ -0.01
CHD4-207ENST00000537634 PIP4K2BP78356 416 aa14.98□□□□□ -0.01
CHD4-207ENST00000537634 TXNDC2Q86VQ3 553 aa14.97□□□□□ -0.01
CHD4-207ENST00000537634 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
CHD4-207ENST00000537634 EID1Q9Y6B2 187 aa14.97□□□□□ -0.01
CHD4-207ENST00000537634 ANKRD50Q9ULJ7 1429 aa14.97□□□□□ -0.01
CHD4-207ENST00000537634 LTKP29376 864 aa14.95□□□□□ -0.02
CHD4-207ENST00000537634 LRRC7Q96NW7 1537 aa14.95□□□□□ -0.02
CHD4-207ENST00000537634 TMEM2Q9UHN6 1383 aa14.95□□□□□ -0.02
CHD4-207ENST00000537634 NOS1P29475 1434 aa14.93□□□□□ -0.02
CHD4-207ENST00000537634 ADGRB3O60242 1522 aa14.93□□□□□ -0.02
CHD4-207ENST00000537634 ILDR2Q71H61 639 aa14.93□□□□□ -0.02
CHD4-207ENST00000537634 RPRD2Q5VT52 1461 aaKnown RBP14.93□□□□□ -0.02
CHD4-207ENST00000537634 TET3O43151 1660 aa14.93□□□□□ -0.02
CHD4-207ENST00000537634 ALKQ9UM73 1620 aa14.92□□□□□ -0.02
CHD4-207ENST00000537634 HSPA1LP34931 641 aa14.92□□□□□ -0.02
CHD4-207ENST00000537634 IDI1Q13907 227 aa14.92□□□□□ -0.02
CHD4-207ENST00000537634 GCC2Q8IWJ2 1684 aa14.91□□□□□ -0.02
CHD4-207ENST00000537634 UNC13BO14795 1591 aa14.91□□□□□ -0.02
CHD4-207ENST00000537634 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
CHD4-207ENST00000537634 SLC52A1Q9NWF4 448 aa14.89□□□□□ -0.03
CHD4-207ENST00000537634 ROCK1Q13464 1354 aa14.88□□□□□ -0.03
CHD4-207ENST00000537634 XIRP1Q702N8 1843 aaKnown RBP14.87□□□□□ -0.03
CHD4-207ENST00000537634 MED1Q15648 1581 aaPredicted RBP14.87□□□□□ -0.03
CHD4-207ENST00000537634 SOCS7O14512 581 aa14.86□□□□□ -0.03
CHD4-207ENST00000537634 MYO5BQ9ULV0 1848 aa14.86□□□□□ -0.03
CHD4-207ENST00000537634 IQGAP3Q86VI3 1631 aa14.85□□□□□ -0.03
CHD4-207ENST00000537634 E9PCH4 1651 aa14.85□□□□□ -0.03
CHD4-207ENST00000537634 ITGAEP38570 1179 aa14.84□□□□□ -0.03
CHD4-207ENST00000537634 SLC26A8Q96RN1 970 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms