RNA–Protein interactions for RNA: ENST00000537297.2

USP15-204, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-204ENST00000537297 REREQ9P2R6 1566 aa17.05■□□□□ 0.32
USP15-204ENST00000537297 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
USP15-204ENST00000537297 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
USP15-204ENST00000537297 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
USP15-204ENST00000537297 SUPT6HQ7KZ85 1726 aaKnown RBP17.02■□□□□ 0.32
USP15-204ENST00000537297 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
USP15-204ENST00000537297 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
USP15-204ENST00000537297 AGLP35573 1532 aa17.01■□□□□ 0.31
USP15-204ENST00000537297 ATP7AQ04656 1500 aa17■□□□□ 0.31
USP15-204ENST00000537297 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
USP15-204ENST00000537297 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
USP15-204ENST00000537297 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
USP15-204ENST00000537297 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
USP15-204ENST00000537297 PLEKHH2Q8IVE3 1493 aa16.97■□□□□ 0.31
USP15-204ENST00000537297 HSPA1LP34931 641 aa16.96■□□□□ 0.31
USP15-204ENST00000537297 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
USP15-204ENST00000537297 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.3
USP15-204ENST00000537297 GGT6Q6P531 493 aa16.95■□□□□ 0.3
USP15-204ENST00000537297 KIAA1107Q9UPP5 1409 aa16.95■□□□□ 0.3
USP15-204ENST00000537297 A2MP01023 1474 aa16.94■□□□□ 0.3
USP15-204ENST00000537297 CLTCQ00610 1675 aaKnown RBP16.94■□□□□ 0.3
USP15-204ENST00000537297 CNTLNQ9NXG0 1405 aa16.93■□□□□ 0.3
USP15-204ENST00000537297 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
USP15-204ENST00000537297 ZMYM3Q14202 1370 aa16.9■□□□□ 0.3
USP15-204ENST00000537297 NCOA2Q15596 1464 aa16.9■□□□□ 0.3
USP15-204ENST00000537297 PLXNC1O60486 1568 aa16.89■□□□□ 0.3
USP15-204ENST00000537297 PIP4K2BP78356 416 aa16.89■□□□□ 0.29
USP15-204ENST00000537297 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
USP15-204ENST00000537297 ADGBQ8N7X0 1667 aa16.88■□□□□ 0.29
USP15-204ENST00000537297 MBD5Q9P267 1494 aa16.88■□□□□ 0.29
USP15-204ENST00000537297 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
USP15-204ENST00000537297 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
USP15-204ENST00000537297 NPATQ14207 1427 aa16.84■□□□□ 0.29
USP15-204ENST00000537297 ZNF142P52746 1687 aaPredicted RBP16.84■□□□□ 0.29
USP15-204ENST00000537297 KIF3BO15066 747 aa16.83■□□□□ 0.28
USP15-204ENST00000537297 PKD2Q13563 968 aa16.83■□□□□ 0.28
USP15-204ENST00000537297 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.28
USP15-204ENST00000537297 MYO3AQ8NEV4 1616 aa16.83■□□□□ 0.28
USP15-204ENST00000537297 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
USP15-204ENST00000537297 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
USP15-204ENST00000537297 PLA2R1Q13018 1463 aa16.81■□□□□ 0.28
USP15-204ENST00000537297 PTPRKQ15262 1439 aa16.81■□□□□ 0.28
USP15-204ENST00000537297 DHX29Q7Z478 1369 aaKnown RBP16.8■□□□□ 0.28
USP15-204ENST00000537297 TOM1O60784 492 aa16.8■□□□□ 0.28
USP15-204ENST00000537297 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
USP15-204ENST00000537297 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
USP15-204ENST00000537297 RTEL1-TNFRSF6BF6WH68 1400 aa16.79■□□□□ 0.28
USP15-204ENST00000537297 CEP170BQ9Y4F5 1589 aaPredicted RBP16.79■□□□□ 0.28
USP15-204ENST00000537297 FBXO31Q5XUX0 539 aaPredicted RBP16.78■□□□□ 0.28
USP15-204ENST00000537297 TSPY4P0CV99 314 aa16.77■□□□□ 0.28
USP15-204ENST00000537297 TSPY10P0CW01 314 aa16.77■□□□□ 0.28
USP15-204ENST00000537297 WASHC2CQ9Y4E1 1318 aa16.75■□□□□ 0.27
USP15-204ENST00000537297 ALKQ9UM73 1620 aa16.75■□□□□ 0.27
USP15-204ENST00000537297 ARHGEF5Q12774 1597 aa16.73■□□□□ 0.27
USP15-204ENST00000537297 RGS17Q9UGC6 210 aaPredicted RBP16.73■□□□□ 0.27
USP15-204ENST00000537297 CPS1P31327 1500 aa16.73■□□□□ 0.27
USP15-204ENST00000537297 KDM5DQ9BY66 1539 aa16.73■□□□□ 0.27
USP15-204ENST00000537297 POLR1AO95602 1720 aaPredicted RBP16.73■□□□□ 0.27
USP15-204ENST00000537297 RSPH4AQ5TD94 716 aa16.72■□□□□ 0.27
USP15-204ENST00000537297 TNRQ92752 1358 aa16.72■□□□□ 0.27
USP15-204ENST00000537297 A2ML1A8K2U0 1454 aa16.71■□□□□ 0.27
USP15-204ENST00000537297 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
USP15-204ENST00000537297 SHANK2Q9UPX8 1470 aa16.7■□□□□ 0.26
USP15-204ENST00000537297 NEURL4Q96JN8 1562 aa16.69■□□□□ 0.26
USP15-204ENST00000537297 MYOM3Q5VTT5 1437 aa16.69■□□□□ 0.26
USP15-204ENST00000537297 PZPP20742 1482 aa16.68■□□□□ 0.26
USP15-204ENST00000537297 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
USP15-204ENST00000537297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP15-204ENST00000537297 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
USP15-204ENST00000537297 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
USP15-204ENST00000537297 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
USP15-204ENST00000537297 MIA2Q96PC5 1412 aa16.63■□□□□ 0.25
USP15-204ENST00000537297 RRP7BPQ9NSQ0 103 aa16.63■□□□□ 0.25
USP15-204ENST00000537297 ABCC3O15438 1527 aa16.63■□□□□ 0.25
USP15-204ENST00000537297 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
USP15-204ENST00000537297 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
USP15-204ENST00000537297 FAM135AQ9P2D6 1515 aa16.62■□□□□ 0.25
USP15-204ENST00000537297 CEP152O94986 1710 aa16.62■□□□□ 0.25
USP15-204ENST00000537297 PTPN23Q9H3S7 1636 aa16.61■□□□□ 0.25
USP15-204ENST00000537297 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
USP15-204ENST00000537297 ANKLE2Q86XL3 938 aa16.6■□□□□ 0.25
USP15-204ENST00000537297 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
USP15-204ENST00000537297 THEMISQ8N1K5 641 aaPredicted RBP16.59■□□□□ 0.25
USP15-204ENST00000537297 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
USP15-204ENST00000537297 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
USP15-204ENST00000537297 MROH1Q8NDA8 1641 aa16.59■□□□□ 0.25
USP15-204ENST00000537297 EIF2AK4Q9P2K8 1649 aaKnown RBP16.59■□□□□ 0.25
USP15-204ENST00000537297 POTEAQ6S8J7 498 aa16.58■□□□□ 0.24
USP15-204ENST00000537297 ABCC5O15440 1437 aa16.58■□□□□ 0.24
USP15-204ENST00000537297 DUOX2Q9NRD8 1548 aa16.58■□□□□ 0.24
USP15-204ENST00000537297 CROCC2H7BZ55 1655 aa16.58■□□□□ 0.24
USP15-204ENST00000537297 ZC3H13Q5T200 1668 aaKnown RBP16.58■□□□□ 0.24
USP15-204ENST00000537297 SETD1AO15047 1707 aaKnown RBP16.58■□□□□ 0.24
USP15-204ENST00000537297 CFAP65Q6ZU64 1925 aaKnown RBP16.58■□□□□ 0.24
USP15-204ENST00000537297 ERVK-7P63135 1459 aa16.57■□□□□ 0.24
USP15-204ENST00000537297 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
USP15-204ENST00000537297 DAPK1P53355 1430 aa16.55■□□□□ 0.24
USP15-204ENST00000537297 FGD6Q6ZV73 1430 aa16.55■□□□□ 0.24
USP15-204ENST00000537297 AKT1S1Q96B36 256 aa16.55■□□□□ 0.24
USP15-204ENST00000537297 LRRC7Q96NW7 1537 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms