RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 MBD5Q9P267 1494 aa8.54□□□□□ -1.04
SNHG1-204ENST00000537068 FKBP8Q14318 412 aa8.54□□□□□ -1.04
SNHG1-204ENST00000537068 ESF1Q9H501 851 aaKnown RBP8.54□□□□□ -1.04
SNHG1-204ENST00000537068 CAMSAP1Q5T5Y3 1602 aa8.54□□□□□ -1.04
SNHG1-204ENST00000537068 SPAG9O60271 1321 aaKnown RBP8.54□□□□□ -1.04
SNHG1-204ENST00000537068 TIAM1Q13009 1591 aa8.53□□□□□ -1.04
SNHG1-204ENST00000537068 CFDP1Q9UEE9 299 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-204ENST00000537068 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-204ENST00000537068 RTEL1-TNFRSF6BF6WH68 1400 aa8.53□□□□□ -1.04
SNHG1-204ENST00000537068 PLA2R1Q13018 1463 aa8.52□□□□□ -1.05
SNHG1-204ENST00000537068 CCNB3Q8WWL7 1395 aa8.52□□□□□ -1.05
SNHG1-204ENST00000537068 MYO3AQ8NEV4 1616 aa8.52□□□□□ -1.05
SNHG1-204ENST00000537068 SAMD1Q6SPF0 538 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-204ENST00000537068 PTPRKQ15262 1439 aa8.52□□□□□ -1.05
SNHG1-204ENST00000537068 CEP162Q5TB80 1403 aa8.51□□□□□ -1.05
SNHG1-204ENST00000537068 CEP170BQ9Y4F5 1589 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-204ENST00000537068 TCOF1Q13428 1488 aaKnown RBP8.51□□□□□ -1.05
SNHG1-204ENST00000537068 MTUS2Q5JR59 1369 aa8.5□□□□□ -1.05
SNHG1-204ENST00000537068 EHBP1L1Q8N3D4 1523 aa8.5□□□□□ -1.05
SNHG1-204ENST00000537068 CAPN15O75808 1086 aa8.5□□□□□ -1.05
SNHG1-204ENST00000537068 ZNF644Q9H582 1327 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-204ENST00000537068 DHX29Q7Z478 1369 aaKnown RBP8.49□□□□□ -1.05
SNHG1-204ENST00000537068 PKD2Q13563 968 aa8.49□□□□□ -1.05
SNHG1-204ENST00000537068 DNMT1P26358 1616 aaKnown RBP8.49□□□□□ -1.05
SNHG1-204ENST00000537068 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
SNHG1-204ENST00000537068 RSPH4AQ5TD94 716 aa8.48□□□□□ -1.05
SNHG1-204ENST00000537068 GGT6Q6P531 493 aa8.48□□□□□ -1.05
SNHG1-204ENST00000537068 A2ML1A8K2U0 1454 aa8.47□□□□□ -1.05
SNHG1-204ENST00000537068 POLR1AO95602 1720 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-204ENST00000537068 ILDR2Q71H61 639 aa8.47□□□□□ -1.05
SNHG1-204ENST00000537068 NCKAP5LQ9HCH0 1330 aa8.47□□□□□ -1.05
SNHG1-204ENST00000537068 APLP2Q06481 763 aa8.46□□□□□ -1.06
SNHG1-204ENST00000537068 ARHGEF5Q12774 1597 aa8.46□□□□□ -1.06
SNHG1-204ENST00000537068 CCDC141Q6ZP82 1450 aa8.45□□□□□ -1.06
SNHG1-204ENST00000537068 ZNF335Q9H4Z2 1342 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-204ENST00000537068 PZPP20742 1482 aa8.45□□□□□ -1.06
SNHG1-204ENST00000537068 NCOA2Q15596 1464 aa8.45□□□□□ -1.06
SNHG1-204ENST00000537068 NEURL4Q96JN8 1562 aa8.44□□□□□ -1.06
SNHG1-204ENST00000537068 DISP3Q9P2K9 1392 aa8.44□□□□□ -1.06
SNHG1-204ENST00000537068 CAMSAP2Q08AD1 1489 aa8.44□□□□□ -1.06
SNHG1-204ENST00000537068 KDM5DQ9BY66 1539 aa8.44□□□□□ -1.06
SNHG1-204ENST00000537068 MAST1Q9Y2H9 1570 aa8.44□□□□□ -1.06
SNHG1-204ENST00000537068 SPATA31D1Q6ZQQ2 1576 aa8.43□□□□□ -1.06
SNHG1-204ENST00000537068 DEPDC5O75140 1603 aa8.43□□□□□ -1.06
SNHG1-204ENST00000537068 RNF17Q9BXT8 1623 aaKnown RBP8.43□□□□□ -1.06
SNHG1-204ENST00000537068 SOCS7O14512 581 aa8.42□□□□□ -1.06
SNHG1-204ENST00000537068 KIF3BO15066 747 aa8.42□□□□□ -1.06
SNHG1-204ENST00000537068 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-204ENST00000537068 MED14O60244 1454 aa8.42□□□□□ -1.06
SNHG1-204ENST00000537068 ZC3H13Q5T200 1668 aaKnown RBP8.42□□□□□ -1.06
SNHG1-204ENST00000537068 EIF2AK4Q9P2K8 1649 aaKnown RBP8.41□□□□□ -1.06
SNHG1-204ENST00000537068 MAP3K1Q13233 1512 aa8.41□□□□□ -1.06
SNHG1-204ENST00000537068 NLRP1Q9C000 1473 aa8.41□□□□□ -1.06
SNHG1-204ENST00000537068 MIA2Q96PC5 1412 aa8.41□□□□□ -1.06
SNHG1-204ENST00000537068 TNRQ92752 1358 aa8.41□□□□□ -1.06
SNHG1-204ENST00000537068 ZNF219Q9P2Y4 722 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-204ENST00000537068 CPS1P31327 1500 aa8.4□□□□□ -1.06
SNHG1-204ENST00000537068 LRRC9Q6ZRR7 1453 aa8.4□□□□□ -1.06
SNHG1-204ENST00000537068 WASHC2CQ9Y4E1 1318 aa8.4□□□□□ -1.06
SNHG1-204ENST00000537068 STRCP1A6NGW2 1772 aa8.4□□□□□ -1.07
SNHG1-204ENST00000537068 MROH1Q8NDA8 1641 aa8.4□□□□□ -1.07
SNHG1-204ENST00000537068 VWDEQ8N2E2 1590 aa8.39□□□□□ -1.07
SNHG1-204ENST00000537068 UGGT1Q9NYU2 1555 aa8.39□□□□□ -1.07
SNHG1-204ENST00000537068 SHANK2Q9UPX8 1470 aa8.39□□□□□ -1.07
SNHG1-204ENST00000537068 CFAP65Q6ZU64 1925 aaKnown RBP8.39□□□□□ -1.07
SNHG1-204ENST00000537068 UBAP1LF5GYI3 381 aa8.39□□□□□ -1.07
SNHG1-204ENST00000537068 TSPY4P0CV99 314 aa8.39□□□□□ -1.07
SNHG1-204ENST00000537068 TSPY10P0CW01 314 aa8.39□□□□□ -1.07
SNHG1-204ENST00000537068 THEMISQ8N1K5 641 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-204ENST00000537068 VPS8Q8N3P4 1428 aa8.38□□□□□ -1.07
SNHG1-204ENST00000537068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.38□□□□□ -1.077e-33■□□□□ 8.4
SNHG1-204ENST00000537068 IQGAP1P46940 1657 aa8.38□□□□□ -1.07
SNHG1-204ENST00000537068 ANKLE2Q86XL3 938 aa8.38□□□□□ -1.07
SNHG1-204ENST00000537068 ALKQ9UM73 1620 aa8.38□□□□□ -1.07
SNHG1-204ENST00000537068 ABCC3O15438 1527 aa8.38□□□□□ -1.07
SNHG1-204ENST00000537068 CEP152O94986 1710 aa8.37□□□□□ -1.07
SNHG1-204ENST00000537068 UBR1Q8IWV7 1749 aa8.37□□□□□ -1.07
SNHG1-204ENST00000537068 RTN4Q9NQC3 1192 aaKnown RBP8.37□□□□□ -1.07
SNHG1-204ENST00000537068 KANK4Q5T7N3 995 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-204ENST00000537068 CROCC2H7BZ55 1655 aa8.36□□□□□ -1.07
SNHG1-204ENST00000537068 NPHP4O75161 1426 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-204ENST00000537068 MYOM3Q5VTT5 1437 aa8.36□□□□□ -1.07
SNHG1-204ENST00000537068 DUOX2Q9NRD8 1548 aa8.35□□□□□ -1.07
SNHG1-204ENST00000537068 ERVK-7P63135 1459 aa8.35□□□□□ -1.07
SNHG1-204ENST00000537068 TOM1O60784 492 aa8.35□□□□□ -1.07
SNHG1-204ENST00000537068 XIRP1Q702N8 1843 aaKnown RBP8.35□□□□□ -1.07
SNHG1-204ENST00000537068 ARHGAP31Q2M1Z3 1444 aa8.35□□□□□ -1.07
SNHG1-204ENST00000537068 KDM5AP29375 1690 aaKnown RBP8.34□□□□□ -1.07
SNHG1-204ENST00000537068 SLIT1O75093 1534 aa8.34□□□□□ -1.08
SNHG1-204ENST00000537068 PRDM15P57071 1507 aaPredicted RBP8.34□□□□□ -1.08
SNHG1-204ENST00000537068 ARHGAP23Q9P227 1491 aa8.33□□□□□ -1.08
SNHG1-204ENST00000537068 LOC105371045A0A1W2PR82 267 aa8.33□□□□□ -1.08
SNHG1-204ENST00000537068 SYNMO15061 1565 aa8.33□□□□□ -1.08
SNHG1-204ENST00000537068 HSPA1LP34931 641 aa8.33□□□□□ -1.08
SNHG1-204ENST00000537068 LRRC7Q96NW7 1537 aa8.33□□□□□ -1.08
SNHG1-204ENST00000537068 MED1Q15648 1581 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-204ENST00000537068 PTPN23Q9H3S7 1636 aa8.32□□□□□ -1.08
SNHG1-204ENST00000537068 ABCC5O15440 1437 aa8.31□□□□□ -1.08
SNHG1-204ENST00000537068 ERBINQ96RT1 1412 aa8.31□□□□□ -1.08
SNHG1-204ENST00000537068 PIK3C2BO00750 1634 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms