RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 DHX29Q7Z478 1369 aaKnown RBP28.46■■■□□ 2.15
LTBR-206ENST00000536876 CCDC141Q6ZP82 1450 aa28.46■■■□□ 2.15
LTBR-206ENST00000536876 FAM135AQ9P2D6 1515 aa28.45■■■□□ 2.15
LTBR-206ENST00000536876 PPP6R1Q9UPN7 881 aa28.44■■■□□ 2.14
LTBR-206ENST00000536876 PZPP20742 1482 aa28.43■■■□□ 2.14
LTBR-206ENST00000536876 NCOA2Q15596 1464 aa28.43■■■□□ 2.14
LTBR-206ENST00000536876 ARHGEF5Q12774 1597 aa28.4■■■□□ 2.14
LTBR-206ENST00000536876 TNRQ92752 1358 aa28.37■■■□□ 2.13
LTBR-206ENST00000536876 UBAP1LF5GYI3 381 aa28.36■■■□□ 2.13
LTBR-206ENST00000536876 RNF17Q9BXT8 1623 aaKnown RBP28.36■■■□□ 2.13
LTBR-206ENST00000536876 VWDEQ8N2E2 1590 aa28.35■■■□□ 2.13
LTBR-206ENST00000536876 FBXO31Q5XUX0 539 aaPredicted RBP28.34■■■□□ 2.13
LTBR-206ENST00000536876 CPS1P31327 1500 aa28.32■■■□□ 2.12
LTBR-206ENST00000536876 ALKQ9UM73 1620 aa28.32■■■□□ 2.12
LTBR-206ENST00000536876 KIF3BO15066 747 aa28.31■■■□□ 2.12
LTBR-206ENST00000536876 DEPDC5O75140 1603 aa28.31■■■□□ 2.12
LTBR-206ENST00000536876 MROH1Q8NDA8 1641 aa28.29■■■□□ 2.12
LTBR-206ENST00000536876 MAST1Q9Y2H9 1570 aa28.29■■■□□ 2.12
LTBR-206ENST00000536876 ZC3H13Q5T200 1668 aaKnown RBP28.29■■■□□ 2.12
LTBR-206ENST00000536876 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
LTBR-206ENST00000536876 STRCP1A6NGW2 1772 aa28.28■■■□□ 2.12
LTBR-206ENST00000536876 NLRP1Q9C000 1473 aa28.27■■■□□ 2.12
LTBR-206ENST00000536876 UGGT1Q9NYU2 1555 aa28.26■■■□□ 2.11
LTBR-206ENST00000536876 ABCC3O15438 1527 aa28.26■■■□□ 2.11
LTBR-206ENST00000536876 IQGAP1P46940 1657 aa28.26■■■□□ 2.11
LTBR-206ENST00000536876 EIF2AK4Q9P2K8 1649 aaKnown RBP28.25■■■□□ 2.11
LTBR-206ENST00000536876 MED1Q15648 1581 aaPredicted RBP28.24■■■□□ 2.11
LTBR-206ENST00000536876 MED14O60244 1454 aa28.24■■■□□ 2.11
LTBR-206ENST00000536876 MIA2Q96PC5 1412 aa28.24■■■□□ 2.11
LTBR-206ENST00000536876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.24■■■□□ 2.11
LTBR-206ENST00000536876 CEP152O94986 1710 aa28.23■■■□□ 2.11
LTBR-206ENST00000536876 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
LTBR-206ENST00000536876 WASHC2CQ9Y4E1 1318 aa28.19■■■□□ 2.1
LTBR-206ENST00000536876 NPHP4O75161 1426 aaPredicted RBP28.18■■■□□ 2.1
LTBR-206ENST00000536876 RSPH4AQ5TD94 716 aa28.17■■■□□ 2.1
LTBR-206ENST00000536876 UBR1Q8IWV7 1749 aa28.17■■■□□ 2.1
LTBR-206ENST00000536876 ERVK-7P63135 1459 aa28.16■■■□□ 2.1
LTBR-206ENST00000536876 HSPA1LP34931 641 aa28.16■■■□□ 2.1
LTBR-206ENST00000536876 VPS8Q8N3P4 1428 aa28.14■■■□□ 2.1
LTBR-206ENST00000536876 SYNMO15061 1565 aa28.13■■■□□ 2.09
LTBR-206ENST00000536876 CFAP65Q6ZU64 1925 aaKnown RBP28.13■■■□□ 2.09
LTBR-206ENST00000536876 CROCC2H7BZ55 1655 aa28.12■■■□□ 2.09
LTBR-206ENST00000536876 ANKLE2Q86XL3 938 aa28.11■■■□□ 2.09
LTBR-206ENST00000536876 PIP4K2BP78356 416 aa28.09■■■□□ 2.09
LTBR-206ENST00000536876 THEMISQ8N1K5 641 aaPredicted RBP28.09■■■□□ 2.09
LTBR-206ENST00000536876 LRRC7Q96NW7 1537 aa28.08■■■□□ 2.08
LTBR-206ENST00000536876 SCAF1Q9H7N4 1312 aaKnown RBP28.07■■■□□ 2.08
LTBR-206ENST00000536876 PRDM15P57071 1507 aaPredicted RBP28.07■■■□□ 2.08
LTBR-206ENST00000536876 MAP3K1Q13233 1512 aa28.07■■■□□ 2.08
LTBR-206ENST00000536876 TSPY4P0CV99 314 aa28.06■■■□□ 2.08
LTBR-206ENST00000536876 TSPY10P0CW01 314 aa28.06■■■□□ 2.08
LTBR-206ENST00000536876 XIRP1Q702N8 1843 aaKnown RBP28.06■■■□□ 2.08
LTBR-206ENST00000536876 MYOM3Q5VTT5 1437 aa28.05■■■□□ 2.08
LTBR-206ENST00000536876 DUOX2Q9NRD8 1548 aa28.04■■■□□ 2.08
LTBR-206ENST00000536876 TOM1O60784 492 aa28.04■■■□□ 2.08
LTBR-206ENST00000536876 KANK4Q5T7N3 995 aaPredicted RBP28.02■■■□□ 2.08
LTBR-206ENST00000536876 ARHGAP23Q9P227 1491 aa28.01■■■□□ 2.07
LTBR-206ENST00000536876 SLIT1O75093 1534 aa28■■■□□ 2.07
LTBR-206ENST00000536876 SCAF11Q99590 1463 aaKnown RBP27.98■■■□□ 2.07
LTBR-206ENST00000536876 PIK3C2BO00750 1634 aa27.97■■■□□ 2.07
LTBR-206ENST00000536876 PTPN23Q9H3S7 1636 aa27.95■■■□□ 2.06
LTBR-206ENST00000536876 ARHGAP31Q2M1Z3 1444 aa27.94■■■□□ 2.06
LTBR-206ENST00000536876 ABCC5O15440 1437 aa27.92■■■□□ 2.06
LTBR-206ENST00000536876 ERBINQ96RT1 1412 aa27.92■■■□□ 2.06
LTBR-206ENST00000536876 KIF15Q9NS87 1388 aa27.91■■■□□ 2.06
LTBR-206ENST00000536876 KDM5AP29375 1690 aaKnown RBP27.89■■■□□ 2.06
LTBR-206ENST00000536876 LOC105371045A0A1W2PR82 267 aa27.88■■■□□ 2.05
LTBR-206ENST00000536876 LTKP29376 864 aa27.88■■■□□ 2.05
LTBR-206ENST00000536876 DAPK1P53355 1430 aa27.84■■■□□ 2.05
LTBR-206ENST00000536876 LMTK2Q8IWU2 1503 aa27.83■■■□□ 2.05
LTBR-206ENST00000536876 EFCAB6Q5THR3 1501 aa27.79■■■□□ 2.04
LTBR-206ENST00000536876 SENP3Q9H4L4 574 aaPredicted RBP27.79■■■□□ 2.04
LTBR-206ENST00000536876 TMEM2Q9UHN6 1383 aa27.78■■■□□ 2.04
LTBR-206ENST00000536876 TET3O43151 1660 aa27.78■■■□□ 2.04
LTBR-206ENST00000536876 FGD6Q6ZV73 1430 aa27.77■■■□□ 2.04
LTBR-206ENST00000536876 TXNDC2Q86VQ3 553 aa27.77■■■□□ 2.04
LTBR-206ENST00000536876 RRP7BPQ9NSQ0 103 aa27.77■■■□□ 2.04
LTBR-206ENST00000536876 ADGRB3O60242 1522 aa27.75■■■□□ 2.03
LTBR-206ENST00000536876 NWD1Q149M9 1564 aa27.74■■■□□ 2.03
LTBR-206ENST00000536876 PHF23Q9BUL5 403 aaPredicted RBP27.74■■■□□ 2.03
LTBR-206ENST00000536876 MYO5BQ9ULV0 1848 aa27.72■■■□□ 2.03
LTBR-206ENST00000536876 NOS1P29475 1434 aa27.72■■■□□ 2.03
LTBR-206ENST00000536876 ROBO1Q9Y6N7 1651 aa27.72■■■□□ 2.03
LTBR-206ENST00000536876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.69■■■□□ 2.021e-7■□□□□ 11
LTBR-206ENST00000536876 RGS17Q9UGC6 210 aaPredicted RBP27.69■■■□□ 2.02
LTBR-206ENST00000536876 ADGRL2O95490 1459 aa27.68■■■□□ 2.02
LTBR-206ENST00000536876 TMEM94Q12767 1356 aa27.66■■■□□ 2.02
LTBR-206ENST00000536876 KANK1Q14678 1352 aa27.66■■■□□ 2.02
LTBR-206ENST00000536876 EID1Q9Y6B2 187 aa27.66■■■□□ 2.02
LTBR-206ENST00000536876 FAM135BQ49AJ0 1406 aa27.66■■■□□ 2.02
LTBR-206ENST00000536876 IDI1Q13907 227 aa27.65■■■□□ 2.02
LTBR-206ENST00000536876 GCC2Q8IWJ2 1684 aa27.65■■■□□ 2.02
LTBR-206ENST00000536876 NKTRP30414 1462 aaKnown RBP27.64■■■□□ 2.01
LTBR-206ENST00000536876 ANKRD30AQ9BXX3 1397 aa27.63■■■□□ 2.01
LTBR-206ENST00000536876 CHD2O14647 1828 aaKnown RBP27.6■■■□□ 2.01
LTBR-206ENST00000536876 CHIC2Q9UKJ5 165 aa27.6■■■□□ 2.01
LTBR-206ENST00000536876 ZFYVE9O95405 1425 aa27.58■■■□□ 2.01
LTBR-206ENST00000536876 TMEM131LA2VDJ0 1609 aa27.57■■■□□ 2
LTBR-206ENST00000536876 KCNA6P17658 529 aa27.57■■■□□ 2
LTBR-206ENST00000536876 SLC26A8Q96RN1 970 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms